RNA–Protein interactions for RNA: ENST00000460616.5

SSR4-206, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 2,482 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-206ENST00000460616 IL2RBP14784 551 aa17.98■□□□□ 0.47
SSR4-206ENST00000460616 NAA16Q6N069 864 aaPredicted RBP17.98■□□□□ 0.47
SSR4-206ENST00000460616 ZNF589Q86UQ0 364 aaPredicted RBP17.98■□□□□ 0.47
SSR4-206ENST00000460616 ZNF396Q96N95 335 aaPredicted RBP17.98■□□□□ 0.47
SSR4-206ENST00000460616 UBXN6Q9BZV1 441 aa17.98■□□□□ 0.47
SSR4-206ENST00000460616 CCDC8Q9H0W5 538 aaPredicted RBP17.98■□□□□ 0.47
SSR4-206ENST00000460616 BOLA2Q9H3K6 86 aa17.98■□□□□ 0.47
SSR4-206ENST00000460616 EFCAB8A8MWE9 144 aa17.98■□□□□ 0.47
SSR4-206ENST00000460616 URI1O94763 535 aaPredicted RBP17.98■□□□□ 0.47
SSR4-206ENST00000460616 FOSBP53539 338 aa17.98■□□□□ 0.47
SSR4-206ENST00000460616 EAF2Q96CJ1 260 aaPredicted RBP17.98■□□□□ 0.47
SSR4-206ENST00000460616 C9orf78Q9NZ63 289 aaPredicted RBP17.98■□□□□ 0.47
SSR4-206ENST00000460616 CHPF2Q9P2E5 772 aa17.98■□□□□ 0.47
SSR4-206ENST00000460616 TNNT3P45378 269 aaPredicted RBP17.97■□□□□ 0.47
SSR4-206ENST00000460616 PLEKHO1Q53GL0 409 aaPredicted RBP17.97■□□□□ 0.47
SSR4-206ENST00000460616 ATL3Q6DD88 541 aa17.97■□□□□ 0.47
SSR4-206ENST00000460616 CACNA1FO60840 1977 aa17.97■□□□□ 0.47
SSR4-206ENST00000460616 TADA3O75528 432 aa17.97■□□□□ 0.47
SSR4-206ENST00000460616 TAF5LO75529 589 aa17.97■□□□□ 0.47
SSR4-206ENST00000460616 SCRN1Q12765 414 aa17.97■□□□□ 0.47
SSR4-206ENST00000460616 SMARCC2Q8TAQ2 1214 aa17.97■□□□□ 0.47
SSR4-206ENST00000460616 MED23Q9ULK4 1368 aa17.97■□□□□ 0.47
SSR4-206ENST00000460616 OAS2P29728 719 aaKnown RBP17.96■□□□□ 0.47
SSR4-206ENST00000460616 DPCR1Q3MIW9 517 aa17.96■□□□□ 0.47
SSR4-206ENST00000460616 CCDC158Q5M9N0 1113 aa17.96■□□□□ 0.47
SSR4-206ENST00000460616 BPIFA3Q9BQP9 254 aa17.96■□□□□ 0.47
SSR4-206ENST00000460616 LLPHQ9BRT6 129 aaKnown RBP17.96■□□□□ 0.47
SSR4-206ENST00000460616 CARD6Q9BX69 1037 aa17.96■□□□□ 0.47
SSR4-206ENST00000460616 LRRC37A3O60309 1634 aa17.96■□□□□ 0.47
SSR4-206ENST00000460616 GLI3P10071 1580 aa17.96■□□□□ 0.47
SSR4-206ENST00000460616 SMC1AQ14683 1233 aaKnown RBP17.96■□□□□ 0.47
SSR4-206ENST00000460616 LRRFIP1Q32MZ4 808 aaKnown RBP17.96■□□□□ 0.47
SSR4-206ENST00000460616 USPL1Q5W0Q7 1092 aa17.96■□□□□ 0.47
SSR4-206ENST00000460616 TRIM65Q6PJ69 517 aa17.96■□□□□ 0.47
SSR4-206ENST00000460616 FMR1NBQ8N0W7 255 aaPredicted RBP17.96■□□□□ 0.47
SSR4-206ENST00000460616 FMNL2Q96PY5 1086 aa17.96■□□□□ 0.47
SSR4-206ENST00000460616 RASSF4Q9H2L5 321 aa17.96■□□□□ 0.47
SSR4-206ENST00000460616 KIAA1468Q9P260 1216 aa17.96■□□□□ 0.47
SSR4-206ENST00000460616 CYP27B1O15528 508 aa17.95■□□□□ 0.46
SSR4-206ENST00000460616 SASH1O94885 1247 aa17.95■□□□□ 0.46
SSR4-206ENST00000460616 ZSCAN26Q16670 478 aa17.95■□□□□ 0.46
SSR4-206ENST00000460616 MPRIPQ6WCQ1 1025 aa17.95■□□□□ 0.46
SSR4-206ENST00000460616 MRPS27Q92552 414 aaKnown RBP17.95■□□□□ 0.46
SSR4-206ENST00000460616 SASH3O75995 380 aa17.95■□□□□ 0.46
SSR4-206ENST00000460616 TBC1D8O95759 1140 aa17.95■□□□□ 0.46
SSR4-206ENST00000460616 G3BP1Q13283 466 aaKnown RBP eCLIP17.95■□□□□ 0.46
SSR4-206ENST00000460616 VPS72Q15906 364 aa17.95■□□□□ 0.46
SSR4-206ENST00000460616 AMOTQ4VCS5 1084 aa17.95■□□□□ 0.46
SSR4-206ENST00000460616 NFATC2IPQ8NCF5 419 aa17.95■□□□□ 0.46
SSR4-206ENST00000460616 LGR6Q9HBX8 967 aa17.95■□□□□ 0.46
SSR4-206ENST00000460616 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.95■□□□□ 0.46
SSR4-206ENST00000460616 ALDH1L1O75891 902 aa17.94■□□□□ 0.46
SSR4-206ENST00000460616 EVCP57679 992 aa17.94■□□□□ 0.46
SSR4-206ENST00000460616 CHMP4AQ9BY43 222 aa17.94■□□□□ 0.46
SSR4-206ENST00000460616 SCN11AQ9UI33 1791 aa17.94■□□□□ 0.46
SSR4-206ENST00000460616 A0A1B0GVL5 298 aa17.94■□□□□ 0.46
SSR4-206ENST00000460616 CC2D1AQ6P1N0 951 aaPredicted RBP17.94■□□□□ 0.46
SSR4-206ENST00000460616 TLR7Q9NYK1 1049 aaKnown RBP17.94■□□□□ 0.46
SSR4-206ENST00000460616 PCDHA7Q9UN72 937 aa17.94■□□□□ 0.46
SSR4-206ENST00000460616 PFKFB2O60825 505 aa17.93■□□□□ 0.46
SSR4-206ENST00000460616 ANXA1P04083 346 aa17.93■□□□□ 0.46
SSR4-206ENST00000460616 FAM98CQ17RN3 349 aaKnown RBP17.93■□□□□ 0.46
SSR4-206ENST00000460616 CCDC191Q8NCU4 936 aa17.93■□□□□ 0.46
SSR4-206ENST00000460616 NSUN7Q8NE18 718 aaKnown RBP17.93■□□□□ 0.46
SSR4-206ENST00000460616 LRRC2Q9BYS8 371 aa17.93■□□□□ 0.46
SSR4-206ENST00000460616 EPC1Q9H2F5 836 aa17.93■□□□□ 0.46
SSR4-206ENST00000460616 RSPH14Q9UHP6 348 aa17.93■□□□□ 0.46
SSR4-206ENST00000460616 HDAC5Q9UQL6 1122 aa17.93■□□□□ 0.46
SSR4-206ENST00000460616 PHKG2P15735 406 aa17.93■□□□□ 0.46
SSR4-206ENST00000460616 ADALQ6DHV7 355 aa17.93■□□□□ 0.46
SSR4-206ENST00000460616 ZCRB1Q8TBF4 217 aaKnown RBP17.93■□□□□ 0.46
SSR4-206ENST00000460616 SIL1Q9H173 461 aa17.93■□□□□ 0.46
SSR4-206ENST00000460616 CWC15Q9P013 229 aaKnown RBP17.93■□□□□ 0.46
SSR4-206ENST00000460616 PARP3Q9Y6F1 533 aa17.93■□□□□ 0.46
SSR4-206ENST00000460616 KDM6AO15550 1401 aaPredicted RBP17.93■□□□□ 0.46
SSR4-206ENST00000460616 NDUFA8P51970 172 aa17.92■□□□□ 0.46
SSR4-206ENST00000460616 EIF4A1P60842 406 aaKnown RBP17.92■□□□□ 0.46
SSR4-206ENST00000460616 AKAP4Q5JQC9 854 aa17.92■□□□□ 0.46
SSR4-206ENST00000460616 C1orf141Q5JVX7 400 aa17.92■□□□□ 0.46
SSR4-206ENST00000460616 CCDC34Q96HJ3 373 aa17.92■□□□□ 0.46
SSR4-206ENST00000460616 ADAMTS7Q9UKP4 1686 aa17.92■□□□□ 0.46
SSR4-206ENST00000460616 PTPDC1A2A3K4 754 aa17.92■□□□□ 0.46
SSR4-206ENST00000460616 FANCGO15287 622 aa17.92■□□□□ 0.46
SSR4-206ENST00000460616 GPR161Q8N6U8 529 aaKnown RBP17.92■□□□□ 0.46
SSR4-206ENST00000460616 AK7Q96M32 723 aa17.92■□□□□ 0.46
SSR4-206ENST00000460616 UTP14AQ9BVJ6 771 aaKnown RBP17.92■□□□□ 0.46
SSR4-206ENST00000460616 EFCC1Q9HA90 598 aa17.92■□□□□ 0.46
SSR4-206ENST00000460616 MYO1CO00159 1063 aa17.91■□□□□ 0.46
SSR4-206ENST00000460616 BIN1O00499 593 aa17.91■□□□□ 0.46
SSR4-206ENST00000460616 CTDNEP1O95476 244 aa17.91■□□□□ 0.46
SSR4-206ENST00000460616 FANCCQ00597 558 aa17.91■□□□□ 0.46
SSR4-206ENST00000460616 REXO1L1PQ8IX06 675 aa17.91■□□□□ 0.46
SSR4-206ENST00000460616 ARFGAP3Q9NP61 516 aa17.91■□□□□ 0.46
SSR4-206ENST00000460616 ATRNO75882 1429 aa17.91■□□□□ 0.46
SSR4-206ENST00000460616 TOGARAM1Q9Y4F4 1720 aa17.91■□□□□ 0.46
SSR4-206ENST00000460616 C10orf67Q8IYJ2 551 aa17.91■□□□□ 0.46
SSR4-206ENST00000460616 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.91■□□□□ 0.46
SSR4-206ENST00000460616 A0A1W2PQ27 194 aa17.9■□□□□ 0.46
SSR4-206ENST00000460616 A0A1W2PQ64 194 aa17.9■□□□□ 0.46
SSR4-206ENST00000460616 A0A1W2PQD8 194 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms