RNA–Protein interactions for RNA: ENST00000458059.7

CNEP1R1-203, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,965 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-203ENST00000458059 KIF28PB7ZC32 967 aa22.81■■□□□ 1.24
CNEP1R1-203ENST00000458059 LMOD1P29536 600 aaPredicted RBP22.81■■□□□ 1.24
CNEP1R1-203ENST00000458059 CCZ1BP86790 482 aa22.81■■□□□ 1.24
CNEP1R1-203ENST00000458059 CCZ1P86791 482 aaPredicted RBP22.81■■□□□ 1.24
CNEP1R1-203ENST00000458059 NKX2-3Q8TAU0 364 aa22.81■■□□□ 1.24
CNEP1R1-203ENST00000458059 XPO4Q9C0E2 1151 aaKnown RBP22.81■■□□□ 1.24
CNEP1R1-203ENST00000458059 PUS7LQ9H0K6 701 aaKnown RBP22.81■■□□□ 1.24
CNEP1R1-203ENST00000458059 CTAGE5O15320 804 aa22.81■■□□□ 1.24
CNEP1R1-203ENST00000458059 CEP126Q9P2H0 1117 aa22.81■■□□□ 1.24
CNEP1R1-203ENST00000458059 OVOS2A0A0G2JMS6 1433 aa22.8■■□□□ 1.24
CNEP1R1-203ENST00000458059 H7C1W4 665 aa22.8■■□□□ 1.24
CNEP1R1-203ENST00000458059 FGAP02671 866 aa22.8■■□□□ 1.24
CNEP1R1-203ENST00000458059 IL15P40933 162 aaPredicted RBP22.8■■□□□ 1.24
CNEP1R1-203ENST00000458059 FMR1NBQ8N0W7 255 aaPredicted RBP22.8■■□□□ 1.24
CNEP1R1-203ENST00000458059 FAM89AQ96GI7 184 aa22.8■■□□□ 1.24
CNEP1R1-203ENST00000458059 MRFAP1L1Q96HT8 127 aa22.8■■□□□ 1.24
CNEP1R1-203ENST00000458059 GOLGA8FQ08AF8 430 aa22.8■■□□□ 1.24
CNEP1R1-203ENST00000458059 GOLGA8DPQ0D2H9 430 aa22.8■■□□□ 1.24
CNEP1R1-203ENST00000458059 TAF7LQ5H9L4 462 aa22.8■■□□□ 1.24
CNEP1R1-203ENST00000458059 LAMA4Q16363 1823 aa22.8■■□□□ 1.24
CNEP1R1-203ENST00000458059 ZAP70P43403 619 aa22.8■■□□□ 1.24
CNEP1R1-203ENST00000458059 PALLDQ8WX93 1383 aa22.8■■□□□ 1.24
CNEP1R1-203ENST00000458059 APPP05067 770 aa22.79■■□□□ 1.24
CNEP1R1-203ENST00000458059 ELF2Q15723 593 aa22.79■■□□□ 1.24
CNEP1R1-203ENST00000458059 NBPF11Q86T75 865 aa22.79■■□□□ 1.24
CNEP1R1-203ENST00000458059 MRC1P22897 1456 aa22.79■■□□□ 1.24
CNEP1R1-203ENST00000458059 SALL1Q9NSC2 1324 aa22.79■■□□□ 1.24
CNEP1R1-203ENST00000458059 UBE2Q2LH0YL09 131 aa22.78■■□□□ 1.24
CNEP1R1-203ENST00000458059 SARM1Q6SZW1 724 aa22.78■■□□□ 1.24
CNEP1R1-203ENST00000458059 LINC00301Q8NCQ3 95 aa22.78■■□□□ 1.24
CNEP1R1-203ENST00000458059 XAGE2Q96GT9 111 aa22.78■■□□□ 1.24
CNEP1R1-203ENST00000458059 PAXBP1Q9Y5B6 917 aa22.78■■□□□ 1.24
CNEP1R1-203ENST00000458059 SIPA1L3O60292 1781 aaPredicted RBP22.78■■□□□ 1.24
CNEP1R1-203ENST00000458059 FOXP2O15409 715 aa22.78■■□□□ 1.24
CNEP1R1-203ENST00000458059 SYNE3Q6ZMZ3 975 aa22.78■■□□□ 1.24
CNEP1R1-203ENST00000458059 INCENPQ9NQS7 918 aa22.78■■□□□ 1.24
CNEP1R1-203ENST00000458059 SPTLC2O15270 562 aa22.77■■□□□ 1.24
CNEP1R1-203ENST00000458059 IMMTQ16891 758 aaKnown RBP22.77■■□□□ 1.24
CNEP1R1-203ENST00000458059 CCDC57Q2TAC2 916 aa22.77■■□□□ 1.24
CNEP1R1-203ENST00000458059 RALYLQ86SE5 291 aaKnown RBP22.77■■□□□ 1.24
CNEP1R1-203ENST00000458059 ATP1A3P13637 1013 aa22.77■■□□□ 1.24
CNEP1R1-203ENST00000458059 PHKBQ93100 1093 aa22.77■■□□□ 1.24
CNEP1R1-203ENST00000458059 MYL10Q9BUA6 226 aa22.77■■□□□ 1.24
CNEP1R1-203ENST00000458059 CCAR2Q8N163 923 aaKnown RBP22.77■■□□□ 1.23
CNEP1R1-203ENST00000458059 LRRN4CLQ8ND94 238 aa22.77■■□□□ 1.23
CNEP1R1-203ENST00000458059 ZNF274Q96GC6 653 aaPredicted RBP22.77■■□□□ 1.23
CNEP1R1-203ENST00000458059 KIAA1468Q9P260 1216 aa22.77■■□□□ 1.23
CNEP1R1-203ENST00000458059 KAT6BQ8WYB5 2073 aa22.77■■□□□ 1.23
CNEP1R1-203ENST00000458059 SLC3A2P08195 630 aaKnown RBP22.76■■□□□ 1.23
CNEP1R1-203ENST00000458059 CDC25BP30305 580 aa22.76■■□□□ 1.23
CNEP1R1-203ENST00000458059 CCDC158Q5M9N0 1113 aa22.76■■□□□ 1.23
CNEP1R1-203ENST00000458059 NAT10Q9H0A0 1025 aaKnown RBP22.76■■□□□ 1.23
CNEP1R1-203ENST00000458059 CTNNA3Q9UI47 895 aa22.76■■□□□ 1.23
CNEP1R1-203ENST00000458059 CAVIN2O95810 425 aa22.76■■□□□ 1.23
CNEP1R1-203ENST00000458059 GPTP24298 496 aa22.76■■□□□ 1.23
CNEP1R1-203ENST00000458059 ADALQ6DHV7 355 aa22.76■■□□□ 1.23
CNEP1R1-203ENST00000458059 SENP2Q9HC62 589 aa22.76■■□□□ 1.23
CNEP1R1-203ENST00000458059 ZNF202O95125 648 aa22.75■■□□□ 1.23
CNEP1R1-203ENST00000458059 MYSM1Q5VVJ2 828 aa22.75■■□□□ 1.23
CNEP1R1-203ENST00000458059 ANTXR2P58335 489 aa22.75■■□□□ 1.23
CNEP1R1-203ENST00000458059 GNL2Q13823 731 aaKnown RBP22.75■■□□□ 1.23
CNEP1R1-203ENST00000458059 SPECC1Q5M775 1068 aa22.75■■□□□ 1.23
CNEP1R1-203ENST00000458059 MICU3Q86XE3 530 aa22.75■■□□□ 1.23
CNEP1R1-203ENST00000458059 AGXT2Q9BYV1 514 aa22.75■■□□□ 1.23
CNEP1R1-203ENST00000458059 HPS5Q9UPZ3 1129 aa22.75■■□□□ 1.23
CNEP1R1-203ENST00000458059 SLIT3O75094 1523 aa22.75■■□□□ 1.23
CNEP1R1-203ENST00000458059 SYT10Q6XYQ8 523 aa22.74■■□□□ 1.23
CNEP1R1-203ENST00000458059 TMX1Q9H3N1 280 aa22.74■■□□□ 1.23
CNEP1R1-203ENST00000458059 RTEL1Q9NZ71 1219 aa22.74■■□□□ 1.23
CNEP1R1-203ENST00000458059 FAM177A1Q8N128 213 aaPredicted RBP22.74■■□□□ 1.23
CNEP1R1-203ENST00000458059 KLHL34Q8N239 644 aa22.74■■□□□ 1.23
CNEP1R1-203ENST00000458059 WDHD1O75717 1129 aaPredicted RBP22.74■■□□□ 1.23
CNEP1R1-203ENST00000458059 PFKFB1P16118 471 aa22.74■■□□□ 1.23
CNEP1R1-203ENST00000458059 ARMCX5Q6P1M9 558 aa22.74■■□□□ 1.23
CNEP1R1-203ENST00000458059 TOM1L2Q6ZVM7 507 aa22.74■■□□□ 1.23
CNEP1R1-203ENST00000458059 FBXO18Q8NFZ0 1043 aa22.74■■□□□ 1.23
CNEP1R1-203ENST00000458059 CLIC6Q96NY7 704 aa22.74■■□□□ 1.23
CNEP1R1-203ENST00000458059 MROH7-TTC4A0A0A0MT08 1334 aa22.74■■□□□ 1.23
CNEP1R1-203ENST00000458059 GPAA1O43292 621 aa22.73■■□□□ 1.23
CNEP1R1-203ENST00000458059 ATF3P18847 181 aa22.73■■□□□ 1.23
CNEP1R1-203ENST00000458059 KMT5BQ4FZB7 885 aa22.73■■□□□ 1.23
CNEP1R1-203ENST00000458059 ZNF771Q7L3S4 317 aaPredicted RBP22.73■■□□□ 1.23
CNEP1R1-203ENST00000458059 CCDC82Q8N4S0 544 aa22.73■■□□□ 1.23
CNEP1R1-203ENST00000458059 ZNF213O14771 459 aa22.73■■□□□ 1.23
CNEP1R1-203ENST00000458059 IDH1O75874 414 aaKnown RBP22.73■■□□□ 1.23
CNEP1R1-203ENST00000458059 RBM6P78332 1123 aaKnown RBP22.72■■□□□ 1.23
CNEP1R1-203ENST00000458059 NYAP1Q6ZVC0 841 aa22.72■■□□□ 1.23
CNEP1R1-203ENST00000458059 E4F1Q66K89 784 aaPredicted RBP22.72■■□□□ 1.23
CNEP1R1-203ENST00000458059 HOMER1Q86YM7 354 aa22.72■■□□□ 1.23
CNEP1R1-203ENST00000458059 ST7Q9NRC1 585 aa22.72■■□□□ 1.23
CNEP1R1-203ENST00000458059 RFX7Q2KHR2 1363 aa22.72■■□□□ 1.23
CNEP1R1-203ENST00000458059 KIF18AQ8NI77 898 aa22.71■■□□□ 1.23
CNEP1R1-203ENST00000458059 SFPQP23246 707 aaKnown RBP eCLIP22.71■■□□□ 1.23
CNEP1R1-203ENST00000458059 ANO1Q5XXA6 986 aa22.71■■□□□ 1.23
CNEP1R1-203ENST00000458059 FBXO38Q6PIJ6 1188 aa22.71■■□□□ 1.23
CNEP1R1-203ENST00000458059 SCN11AQ9UI33 1791 aa22.71■■□□□ 1.23
CNEP1R1-203ENST00000458059 ARFGEF2Q9Y6D5 1785 aa22.71■■□□□ 1.23
CNEP1R1-203ENST00000458059 PNOCQ13519 176 aa22.71■■□□□ 1.23
CNEP1R1-203ENST00000458059 DPF2Q92785 391 aa22.71■■□□□ 1.23
CNEP1R1-203ENST00000458059 STRN4Q9NRL3 753 aa22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms