RNA–Protein interactions for RNA: ENST00000456367.5

PCDH9-203, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 5,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-203ENST00000456367 VCX3BQ9H321 246 aa5.65□□□□□ -1.51
PCDH9-203ENST00000456367 BOLA2Q9H3K6 86 aa5.65□□□□□ -1.51
PCDH9-203ENST00000456367 VCX3AQ9NNX9 186 aa5.65□□□□□ -1.51
PCDH9-203ENST00000456367 GNL3LQ9NVN8 582 aaKnown RBP5.65□□□□□ -1.51
PCDH9-203ENST00000456367 CWC25Q9NXE8 425 aaPredicted RBP5.65□□□□□ -1.51
PCDH9-203ENST00000456367 IFT140Q96RY7 1462 aa5.65□□□□□ -1.51
PCDH9-203ENST00000456367 HIP1RO75146 1068 aa5.65□□□□□ -1.51
PCDH9-203ENST00000456367 PPP2R5AQ15172 486 aa5.65□□□□□ -1.51
PCDH9-203ENST00000456367 FBXO38Q6PIJ6 1188 aa5.65□□□□□ -1.51
PCDH9-203ENST00000456367 SARM1Q6SZW1 724 aa5.65□□□□□ -1.51
PCDH9-203ENST00000456367 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.65□□□□□ -1.51
PCDH9-203ENST00000456367 PHLDB2Q86SQ0 1253 aa5.65□□□□□ -1.51
PCDH9-203ENST00000456367 TRIM47Q96LD4 638 aa5.65□□□□□ -1.51
PCDH9-203ENST00000456367 TRIM6Q9C030 488 aaPredicted RBP5.65□□□□□ -1.51
PCDH9-203ENST00000456367 RNF216Q9NWF9 866 aaPredicted RBP5.65□□□□□ -1.51
PCDH9-203ENST00000456367 CCT2P78371 535 aaKnown RBP5.64□□□□□ -1.51
PCDH9-203ENST00000456367 TAF7Q15545 349 aaPredicted RBP5.64□□□□□ -1.51
PCDH9-203ENST00000456367 GKAP1Q5VSY0 366 aaPredicted RBP5.64□□□□□ -1.51
PCDH9-203ENST00000456367 RRAGBQ5VZM2 374 aa5.64□□□□□ -1.51
PCDH9-203ENST00000456367 TAOK1Q7L7X3 1001 aa5.64□□□□□ -1.51
PCDH9-203ENST00000456367 RNF10Q8N5U6 811 aaKnown RBP5.64□□□□□ -1.51
PCDH9-203ENST00000456367 KCTD17Q8N5Z5 321 aa5.64□□□□□ -1.51
PCDH9-203ENST00000456367 CCDC110Q8TBZ0 833 aa5.64□□□□□ -1.51
PCDH9-203ENST00000456367 CTNNBL1Q8WYA6 563 aaPredicted RBP5.64□□□□□ -1.51
PCDH9-203ENST00000456367 CABP1Q9NZU7 370 aa5.64□□□□□ -1.51
PCDH9-203ENST00000456367 FAM184BQ9ULE4 1060 aa5.64□□□□□ -1.51
PCDH9-203ENST00000456367 PPP2R2CQ9Y2T4 447 aa5.64□□□□□ -1.51
PCDH9-203ENST00000456367 TTC21BQ7Z4L5 1316 aa5.64□□□□□ -1.51
PCDH9-203ENST00000456367 RTEL1-TNFRSF6BF6WH68 1400 aa5.64□□□□□ -1.51
PCDH9-203ENST00000456367 IDEP14735 1019 aa5.64□□□□□ -1.51
PCDH9-203ENST00000456367 METAP2P50579 478 aaKnown RBP eCLIP5.64□□□□□ -1.51
PCDH9-203ENST00000456367 PPP1R42Q7Z4L9 355 aa5.64□□□□□ -1.51
PCDH9-203ENST00000456367 RAB11FIP4Q86YS3 637 aa5.64□□□□□ -1.51
PCDH9-203ENST00000456367 RAPGEF4Q8WZA2 1011 aa5.64□□□□□ -1.51
PCDH9-203ENST00000456367 P3H4Q92791 437 aa5.64□□□□□ -1.51
PCDH9-203ENST00000456367 PPP1R13BQ96KQ4 1090 aa5.64□□□□□ -1.51
PCDH9-203ENST00000456367 PRAM1Q96QH2 718 aa5.64□□□□□ -1.51
PCDH9-203ENST00000456367 PDE11AQ9HCR9 933 aa5.64□□□□□ -1.51
PCDH9-203ENST00000456367 PRDM4Q9UKN5 801 aa5.64□□□□□ -1.51
PCDH9-203ENST00000456367 CTIFO43310 598 aaKnown RBP5.64□□□□□ -1.51
PCDH9-203ENST00000456367 USP19O94966 1318 aa5.64□□□□□ -1.51
PCDH9-203ENST00000456367 POLR3DP05423 398 aaPredicted RBP5.64□□□□□ -1.51
PCDH9-203ENST00000456367 NOP2P46087 812 aaKnown RBP5.64□□□□□ -1.51
PCDH9-203ENST00000456367 LRMPQ12912 555 aa5.64□□□□□ -1.51
PCDH9-203ENST00000456367 PPP2R5EQ16537 467 aa5.64□□□□□ -1.51
PCDH9-203ENST00000456367 AMOTQ4VCS5 1084 aa5.64□□□□□ -1.51
PCDH9-203ENST00000456367 Q6ZUG5 572 aa5.64□□□□□ -1.51
PCDH9-203ENST00000456367 DHX32Q7L7V1 743 aaKnown RBP5.64□□□□□ -1.51
PCDH9-203ENST00000456367 JAKMIP2Q96AA8 810 aa5.64□□□□□ -1.51
PCDH9-203ENST00000456367 CFAP57Q96MR6 1250 aa5.64□□□□□ -1.51
PCDH9-203ENST00000456367 XPO4Q9C0E2 1151 aaKnown RBP5.64□□□□□ -1.51
PCDH9-203ENST00000456367 TCP11L1Q9NUJ3 509 aa5.64□□□□□ -1.51
PCDH9-203ENST00000456367 BAIAP2L1Q9UHR4 511 aa5.64□□□□□ -1.51
PCDH9-203ENST00000456367 WWC3Q9ULE0 1092 aa5.64□□□□□ -1.51
PCDH9-203ENST00000456367 SAR1BQ9Y6B6 198 aa5.64□□□□□ -1.51
PCDH9-203ENST00000456367 ZFYVE9O95405 1425 aa5.64□□□□□ -1.51
PCDH9-203ENST00000456367 ZNF521Q96K83 1311 aa5.64□□□□□ -1.51
PCDH9-203ENST00000456367 A0A1W2PRG0 241 aa5.64□□□□□ -1.51
PCDH9-203ENST00000456367 EIF3CLB5ME19 914 aaKnown RBP5.64□□□□□ -1.51
PCDH9-203ENST00000456367 SGSM2O43147 1006 aa5.64□□□□□ -1.51
PCDH9-203ENST00000456367 CUTAO60888 179 aa5.64□□□□□ -1.51
PCDH9-203ENST00000456367 ALDH1L1O75891 902 aa5.64□□□□□ -1.51
PCDH9-203ENST00000456367 GUCY2CP25092 1073 aa5.64□□□□□ -1.51
PCDH9-203ENST00000456367 NLRP5P59047 1200 aa5.64□□□□□ -1.51
PCDH9-203ENST00000456367 TMEM266Q2M3C6 531 aa5.64□□□□□ -1.51
PCDH9-203ENST00000456367 KRI1Q8N9T8 703 aaKnown RBP5.64□□□□□ -1.51
PCDH9-203ENST00000456367 GBP5Q96PP8 586 aa5.64□□□□□ -1.51
PCDH9-203ENST00000456367 EIF3CQ99613 913 aaKnown RBP5.64□□□□□ -1.51
PCDH9-203ENST00000456367 MEIS3Q99687 375 aa5.64□□□□□ -1.51
PCDH9-203ENST00000456367 TCHPQ9BT92 498 aa5.64□□□□□ -1.51
PCDH9-203ENST00000456367 FAM204AQ9H8W3 233 aa5.64□□□□□ -1.51
PCDH9-203ENST00000456367 NKIRAS1Q9NYS0 192 aa5.64□□□□□ -1.51
PCDH9-203ENST00000456367 SNX14Q9Y5W7 946 aa5.64□□□□□ -1.51
PCDH9-203ENST00000456367 RPS6KB1P23443 525 aa5.63□□□□□ -1.51
PCDH9-203ENST00000456367 KCNJ6P48051 423 aa5.63□□□□□ -1.51
PCDH9-203ENST00000456367 MCMDC2Q4G0Z9 681 aa5.63□□□□□ -1.51
PCDH9-203ENST00000456367 SND1Q7KZF4 910 aaKnown RBP eCLIP5.63□□□□□ -1.51
PCDH9-203ENST00000456367 SH3GL3Q99963 347 aa5.63□□□□□ -1.51
PCDH9-203ENST00000456367 SELENOSQ9BQE4 189 aa5.63□□□□□ -1.51
PCDH9-203ENST00000456367 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.63□□□□□ -1.51
PCDH9-203ENST00000456367 HAUS4Q9H6D7 363 aa5.63□□□□□ -1.51
PCDH9-203ENST00000456367 BATF3Q9NR55 127 aa5.63□□□□□ -1.51
PCDH9-203ENST00000456367 ADAM21Q9UKJ8 722 aa5.63□□□□□ -1.51
PCDH9-203ENST00000456367 RIPOR2Q9Y4F9 1068 aa5.63□□□□□ -1.51
PCDH9-203ENST00000456367 DNMBPQ6XZF7 1577 aa5.63□□□□□ -1.51
PCDH9-203ENST00000456367 IKBKBO14920 756 aa5.63□□□□□ -1.51
PCDH9-203ENST00000456367 ACTN4O43707 911 aaKnown RBP5.63□□□□□ -1.51
PCDH9-203ENST00000456367 FLOT1O75955 427 aa5.63□□□□□ -1.51
PCDH9-203ENST00000456367 SSBP05455 408 aaKnown RBP eCLIP5.63□□□□□ -1.51
PCDH9-203ENST00000456367 IFIT1P09914 478 aaKnown RBP5.63□□□□□ -1.51
PCDH9-203ENST00000456367 CCT5P48643 541 aa5.63□□□□□ -1.51
PCDH9-203ENST00000456367 IRX4P78413 519 aa5.63□□□□□ -1.51
PCDH9-203ENST00000456367 MXRA7P84157 204 aa5.63□□□□□ -1.51
PCDH9-203ENST00000456367 SATB1Q01826 763 aa5.63□□□□□ -1.51
PCDH9-203ENST00000456367 UBE4AQ14139 1066 aa5.63□□□□□ -1.51
PCDH9-203ENST00000456367 NBPF14Q5TI25 921 aa5.63□□□□□ -1.51
PCDH9-203ENST00000456367 SRLQ86TD4 932 aa5.63□□□□□ -1.51
PCDH9-203ENST00000456367 PNMA8AQ86V59 439 aaPredicted RBP5.63□□□□□ -1.51
PCDH9-203ENST00000456367 TRIML1Q8N9V2 468 aa5.63□□□□□ -1.51
PCDH9-203ENST00000456367 SAAL1Q96ER3 474 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms