RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 NLRP3Q96P20 1036 aa16.15■□□□□ 0.18
CLK3-203ENST00000454830 GADD45BO75293 160 aaPredicted RBP16.15■□□□□ 0.18
CLK3-203ENST00000454830 PDE6AP16499 860 aa16.15■□□□□ 0.18
CLK3-203ENST00000454830 CLEC4GQ6UXB4 293 aa16.15■□□□□ 0.18
CLK3-203ENST00000454830 RAI14Q9P0K7 980 aa16.15■□□□□ 0.18
CLK3-203ENST00000454830 SYCE3A1L190 88 aa16.14■□□□□ 0.18
CLK3-203ENST00000454830 MBD3O95983 291 aa16.14■□□□□ 0.18
CLK3-203ENST00000454830 GYG1P46976 350 aa16.14■□□□□ 0.18
CLK3-203ENST00000454830 ST3GAL1Q11201 340 aa16.14■□□□□ 0.18
CLK3-203ENST00000454830 ZSCAN23Q3MJ62 389 aa16.14■□□□□ 0.18
CLK3-203ENST00000454830 CERKQ8TCT0 537 aa16.14■□□□□ 0.18
CLK3-203ENST00000454830 NCOA5Q9HCD5 579 aaKnown RBP16.14■□□□□ 0.18
CLK3-203ENST00000454830 SPATA31A6Q5VVP1 1343 aa16.14■□□□□ 0.17
CLK3-203ENST00000454830 TSGA10IPQ3SY00 556 aa16.14■□□□□ 0.17
CLK3-203ENST00000454830 KDM4AO75164 1064 aa16.14■□□□□ 0.17
CLK3-203ENST00000454830 ADD2P35612 726 aa16.14■□□□□ 0.17
CLK3-203ENST00000454830 MIGA1Q8NAN2 632 aa16.14■□□□□ 0.17
CLK3-203ENST00000454830 MTMR6Q9Y217 621 aa16.14■□□□□ 0.17
CLK3-203ENST00000454830 RPS6KA4O75676 772 aa16.13■□□□□ 0.17
CLK3-203ENST00000454830 GPHNQ9NQX3 736 aaPredicted RBP16.13■□□□□ 0.17
CLK3-203ENST00000454830 GOLGA6L4A6NEF3 574 aa16.13■□□□□ 0.17
CLK3-203ENST00000454830 RRP12Q5JTH9 1297 aaKnown RBP16.13■□□□□ 0.17
CLK3-203ENST00000454830 TPTE2Q6XPS3 522 aa16.13■□□□□ 0.17
CLK3-203ENST00000454830 CDC37L1Q7L3B6 337 aa16.13■□□□□ 0.17
CLK3-203ENST00000454830 MYH14Q7Z406 1995 aaKnown RBP16.13■□□□□ 0.17
CLK3-203ENST00000454830 MBD4O95243 580 aa16.13■□□□□ 0.17
CLK3-203ENST00000454830 FAM196AQ6ZSG2 479 aa16.13■□□□□ 0.17
CLK3-203ENST00000454830 GNL3LQ9NVN8 582 aaKnown RBP16.13■□□□□ 0.17
CLK3-203ENST00000454830 NRAPQ86VF7 1730 aa16.13■□□□□ 0.17
CLK3-203ENST00000454830 WTIPA6NIX2 430 aaPredicted RBP16.12■□□□□ 0.17
CLK3-203ENST00000454830 TRAPPC3LQ5T215 181 aa16.12■□□□□ 0.17
CLK3-203ENST00000454830 CELF1Q92879 486 aaKnown RBP16.12■□□□□ 0.17
CLK3-203ENST00000454830 SYAP1Q96A49 352 aaPredicted RBP16.12■□□□□ 0.17
CLK3-203ENST00000454830 ARMT1Q9H993 441 aa16.12■□□□□ 0.17
CLK3-203ENST00000454830 TFIP11Q9UBB9 837 aaKnown RBP16.12■□□□□ 0.17
CLK3-203ENST00000454830 GUCY1B3Q02153 619 aa16.12■□□□□ 0.17
CLK3-203ENST00000454830 ARHGEF1Q92888 912 aaKnown RBP16.12■□□□□ 0.17
CLK3-203ENST00000454830 QTRT2Q9H974 415 aaKnown RBP16.12■□□□□ 0.17
CLK3-203ENST00000454830 NARFQ9UHQ1 456 aa16.12■□□□□ 0.17
CLK3-203ENST00000454830 PRC1O43663 620 aa16.12■□□□□ 0.17
CLK3-203ENST00000454830 CHAF1AQ13111 956 aaPredicted RBP16.12■□□□□ 0.17
CLK3-203ENST00000454830 CAVIN4Q5BKX8 364 aa16.12■□□□□ 0.17
CLK3-203ENST00000454830 GTF3C6Q969F1 213 aa16.12■□□□□ 0.17
CLK3-203ENST00000454830 NYXQ9GZU5 481 aa16.12■□□□□ 0.17
CLK3-203ENST00000454830 NAPBQ9H115 298 aa16.12■□□□□ 0.17
CLK3-203ENST00000454830 JAG2Q9Y219 1238 aa16.12■□□□□ 0.17
CLK3-203ENST00000454830 CEBPZQ03701 1054 aaKnown RBP16.11■□□□□ 0.17
CLK3-203ENST00000454830 NCOA7Q8NI08 942 aa16.11■□□□□ 0.17
CLK3-203ENST00000454830 TMEM63CQ9P1W3 806 aa16.11■□□□□ 0.17
CLK3-203ENST00000454830 TRPC5Q9UL62 973 aaPredicted RBP16.11■□□□□ 0.17
CLK3-203ENST00000454830 FSD2A1L4K1 749 aa16.11■□□□□ 0.17
CLK3-203ENST00000454830 CPLX1O14810 134 aa16.11■□□□□ 0.17
CLK3-203ENST00000454830 TDO2P48775 406 aa16.11■□□□□ 0.17
CLK3-203ENST00000454830 RNF214Q8ND24 703 aa16.11■□□□□ 0.17
CLK3-203ENST00000454830 FGFR2P21802 821 aa16.1■□□□□ 0.17
CLK3-203ENST00000454830 MCM5P33992 734 aa16.1■□□□□ 0.17
CLK3-203ENST00000454830 SCRN1Q12765 414 aa16.1■□□□□ 0.17
CLK3-203ENST00000454830 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.1■□□□□ 0.17
CLK3-203ENST00000454830 CNTNAP4Q9C0A0 1308 aa16.1■□□□□ 0.17
CLK3-203ENST00000454830 ARID4AP29374 1257 aaPredicted RBP16.1■□□□□ 0.17
CLK3-203ENST00000454830 NFXL1Q6ZNB6 911 aa16.1■□□□□ 0.17
CLK3-203ENST00000454830 CSPP1Q1MSJ5 1256 aa16.1■□□□□ 0.17
CLK3-203ENST00000454830 TFCP2L1Q9NZI6 479 aa16.1■□□□□ 0.17
CLK3-203ENST00000454830 KLF18A0A0U1RQI7 1052 aa16.09■□□□□ 0.17
CLK3-203ENST00000454830 CYP7A1P22680 504 aa16.09■□□□□ 0.17
CLK3-203ENST00000454830 NASPP49321 788 aaPredicted RBP16.09■□□□□ 0.17
CLK3-203ENST00000454830 RPS8P62241 208 aaKnown RBP16.09■□□□□ 0.17
CLK3-203ENST00000454830 UBE3CQ15386 1083 aa16.09■□□□□ 0.17
CLK3-203ENST00000454830 GOLGA8BA8MQT2 603 aa16.09■□□□□ 0.17
CLK3-203ENST00000454830 KRT85P78386 507 aa16.09■□□□□ 0.17
CLK3-203ENST00000454830 BCL2L12Q9HB09 334 aa16.09■□□□□ 0.17
CLK3-203ENST00000454830 KIF3AQ9Y496 699 aa16.09■□□□□ 0.17
CLK3-203ENST00000454830 AMIGO3Q86WK7 504 aa16.08■□□□□ 0.17
CLK3-203ENST00000454830 TRIM44Q96DX7 344 aaPredicted RBP16.08■□□□□ 0.17
CLK3-203ENST00000454830 SLC4A4Q9Y6R1 1079 aa16.08■□□□□ 0.17
CLK3-203ENST00000454830 PTPDC1A2A3K4 754 aa16.08■□□□□ 0.16
CLK3-203ENST00000454830 B4E1Z4 1266 aa16.08■□□□□ 0.16
CLK3-203ENST00000454830 ANKIB1Q9P2G1 1089 aa16.08■□□□□ 0.16
CLK3-203ENST00000454830 MINDY4BA8MYZ0 360 aa16.08■□□□□ 0.16
CLK3-203ENST00000454830 TRIM37O94972 964 aa16.08■□□□□ 0.16
CLK3-203ENST00000454830 RXRAP19793 462 aa16.08■□□□□ 0.16
CLK3-203ENST00000454830 CCDC144CPQ8IYA2 1237 aa16.08■□□□□ 0.16
CLK3-203ENST00000454830 WNK3Q9BYP7 1800 aa16.08■□□□□ 0.16
CLK3-203ENST00000454830 PRKAB2O43741 272 aa16.07■□□□□ 0.16
CLK3-203ENST00000454830 NACAP1Q9BZK3 213 aa16.07■□□□□ 0.16
CLK3-203ENST00000454830 INCENPQ9NQS7 918 aa16.07■□□□□ 0.16
CLK3-203ENST00000454830 DENND2AQ9ULE3 1009 aa16.07■□□□□ 0.16
CLK3-203ENST00000454830 MINPP1Q9UNW1 487 aa16.07■□□□□ 0.16
CLK3-203ENST00000454830 ABCC12Q96J65 1359 aa16.07■□□□□ 0.16
CLK3-203ENST00000454830 NWD2Q9ULI1 1742 aa16.07■□□□□ 0.16
CLK3-203ENST00000454830 CTDSPL2Q05D32 466 aa16.07■□□□□ 0.16
CLK3-203ENST00000454830 MYH3P11055 1940 aa16.07■□□□□ 0.16
CLK3-203ENST00000454830 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.07■□□□□ 0.16
CLK3-203ENST00000454830 RC3H1Q5TC82 1133 aaKnown RBP16.07■□□□□ 0.16
CLK3-203ENST00000454830 ZNF512BQ96KM6 892 aaPredicted RBP16.07■□□□□ 0.16
CLK3-203ENST00000454830 ISY1Q9ULR0 285 aaKnown RBP16.07■□□□□ 0.16
CLK3-203ENST00000454830 PFKFB2O60825 505 aa16.06■□□□□ 0.16
CLK3-203ENST00000454830 EXOSC10Q01780 885 aaKnown RBP16.06■□□□□ 0.16
CLK3-203ENST00000454830 TICAM2Q86XR7 235 aa16.06■□□□□ 0.16
CLK3-203ENST00000454830 ALDH8A1Q9H2A2 487 aaPredicted RBP16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms