RNA–Protein interactions for RNA: ENST00000453963.5

SEC16A-207, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SEC16A, Length 4,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-207ENST00000453963 ESR2Q92731 530 aa13.67□□□□□ -0.22
SEC16A-207ENST00000453963 GTF3C6Q969F1 213 aa13.67□□□□□ -0.22
SEC16A-207ENST00000453963 PPP2R3AQ06190 1150 aa13.67□□□□□ -0.22
SEC16A-207ENST00000453963 OTUD6BQ8N6M0 293 aa13.67□□□□□ -0.22
SEC16A-207ENST00000453963 SPAG5Q96R06 1193 aa13.67□□□□□ -0.22
SEC16A-207ENST00000453963 LZTFL1Q9NQ48 299 aa13.67□□□□□ -0.22
SEC16A-207ENST00000453963 STXBP4Q6ZWJ1 553 aa13.67□□□□□ -0.22
SEC16A-207ENST00000453963 PHACTR3Q96KR7 559 aa13.67□□□□□ -0.22
SEC16A-207ENST00000453963 PAG1Q9NWQ8 432 aa13.67□□□□□ -0.22
SEC16A-207ENST00000453963 IMPACTQ9P2X3 320 aa13.67□□□□□ -0.22
SEC16A-207ENST00000453963 PUF60Q9UHX1 559 aaKnown RBP13.67□□□□□ -0.22
SEC16A-207ENST00000453963 FSD2A1L4K1 749 aa13.66□□□□□ -0.22
SEC16A-207ENST00000453963 APOBRQ0VD83 1088 aa13.66□□□□□ -0.22
SEC16A-207ENST00000453963 ACSBG1Q96GR2 724 aa13.66□□□□□ -0.22
SEC16A-207ENST00000453963 CCDC42Q96M95 316 aa13.66□□□□□ -0.22
SEC16A-207ENST00000453963 PA2G4Q9UQ80 394 aaKnown RBP13.66□□□□□ -0.22
SEC16A-207ENST00000453963 ADAMTS12P58397 1594 aa13.66□□□□□ -0.22
SEC16A-207ENST00000453963 ELP1O95163 1332 aa13.66□□□□□ -0.22
SEC16A-207ENST00000453963 ATP6V1AP38606 617 aa13.66□□□□□ -0.22
SEC16A-207ENST00000453963 ATP2B3Q16720 1220 aa13.66□□□□□ -0.22
SEC16A-207ENST00000453963 EYA1Q99502 592 aa13.66□□□□□ -0.22
SEC16A-207ENST00000453963 BRD1O95696 1058 aa13.66□□□□□ -0.22
SEC16A-207ENST00000453963 NFATC2IPQ8NCF5 419 aa13.66□□□□□ -0.22
SEC16A-207ENST00000453963 DDX12PQ92771 950 aa13.66□□□□□ -0.22
SEC16A-207ENST00000453963 DHX58Q96C10 678 aa13.66□□□□□ -0.22
SEC16A-207ENST00000453963 CBX8Q9HC52 389 aa13.66□□□□□ -0.22
SEC16A-207ENST00000453963 NLRP3Q96P20 1036 aa13.66□□□□□ -0.22
SEC16A-207ENST00000453963 LLPHQ9BRT6 129 aaKnown RBP13.66□□□□□ -0.22
SEC16A-207ENST00000453963 TMEM63CQ9P1W3 806 aa13.66□□□□□ -0.22
SEC16A-207ENST00000453963 VAV2P52735 878 aa13.65□□□□□ -0.22
SEC16A-207ENST00000453963 UBE4AQ14139 1066 aa13.65□□□□□ -0.22
SEC16A-207ENST00000453963 SETDB2Q96T68 719 aa13.65□□□□□ -0.22
SEC16A-207ENST00000453963 PLVAPQ9BX97 442 aa13.65□□□□□ -0.22
SEC16A-207ENST00000453963 RPS6KB1P23443 525 aa13.65□□□□□ -0.22
SEC16A-207ENST00000453963 C10orf67Q8IYJ2 551 aa13.65□□□□□ -0.22
SEC16A-207ENST00000453963 OTUD7AQ8TE49 926 aaPredicted RBP13.65□□□□□ -0.22
SEC16A-207ENST00000453963 GUCA1BQ9UMX6 200 aa13.65□□□□□ -0.22
SEC16A-207ENST00000453963 AKR1B15C9JRZ8 316 aaPredicted RBP13.65□□□□□ -0.22
SEC16A-207ENST00000453963 RNF113AO15541 343 aaKnown RBP13.65□□□□□ -0.22
SEC16A-207ENST00000453963 RHOXF2BP0C7M4 288 aa13.65□□□□□ -0.22
SEC16A-207ENST00000453963 CCDC121Q6ZUS5 278 aa13.65□□□□□ -0.22
SEC16A-207ENST00000453963 RHOXF2Q9BQY4 288 aa13.65□□□□□ -0.22
SEC16A-207ENST00000453963 ABCC2Q92887 1545 aa13.65□□□□□ -0.22
SEC16A-207ENST00000453963 MACROD2A1Z1Q3 448 aa13.65□□□□□ -0.22
SEC16A-207ENST00000453963 PHACTR2O75167 634 aa13.65□□□□□ -0.22
SEC16A-207ENST00000453963 GNAQP50148 359 aa13.65□□□□□ -0.22
SEC16A-207ENST00000453963 FAM76AQ8TAV0 307 aa13.65□□□□□ -0.22
SEC16A-207ENST00000453963 ZNF622Q969S3 477 aaKnown RBP eCLIP13.65□□□□□ -0.222e-6■□□□□ 10.3
SEC16A-207ENST00000453963 DRC1Q96MC2 740 aa13.65□□□□□ -0.22
SEC16A-207ENST00000453963 LUC7L2Q9Y383 392 aaKnown RBP13.65□□□□□ -0.22
SEC16A-207ENST00000453963 SNX14Q9Y5W7 946 aa13.65□□□□□ -0.22
SEC16A-207ENST00000453963 CFAP43Q8NDM7 1665 aa13.65□□□□□ -0.23
SEC16A-207ENST00000453963 WDR62O43379 1518 aa13.64□□□□□ -0.23
SEC16A-207ENST00000453963 MAP3K19Q56UN5 1328 aa13.64□□□□□ -0.23
SEC16A-207ENST00000453963 SGSM2O43147 1006 aa13.64□□□□□ -0.23
SEC16A-207ENST00000453963 C8orf37Q96NL8 207 aa13.64□□□□□ -0.23
SEC16A-207ENST00000453963 SHANK2Q9UPX8 1470 aa13.64□□□□□ -0.23
SEC16A-207ENST00000453963 A0A1B0GVL5 298 aa13.64□□□□□ -0.23
SEC16A-207ENST00000453963 ST5P78524 1137 aa13.64□□□□□ -0.23
SEC16A-207ENST00000453963 KRT24Q2M2I5 525 aa13.64□□□□□ -0.23
SEC16A-207ENST00000453963 ANKS4BQ8N8V4 417 aa13.64□□□□□ -0.23
SEC16A-207ENST00000453963 STMN4Q9H169 189 aaPredicted RBP13.64□□□□□ -0.23
SEC16A-207ENST00000453963 PRPHP41219 470 aa13.64□□□□□ -0.23
SEC16A-207ENST00000453963 CCDC129Q6ZRS4 1044 aa13.64□□□□□ -0.23
SEC16A-207ENST00000453963 DCAF5Q96JK2 942 aa13.64□□□□□ -0.23
SEC16A-207ENST00000453963 BICDL2A1A5D9 508 aa13.63□□□□□ -0.23
SEC16A-207ENST00000453963 ATP2C2O75185 946 aa13.63□□□□□ -0.23
SEC16A-207ENST00000453963 IFIT1BQ5T764 474 aaKnown RBP13.63□□□□□ -0.23
SEC16A-207ENST00000453963 C6orf163Q5TEZ5 329 aa13.63□□□□□ -0.23
SEC16A-207ENST00000453963 LMBR1Q8WVP7 490 aa13.63□□□□□ -0.23
SEC16A-207ENST00000453963 CABP5Q9NP86 173 aa13.63□□□□□ -0.23
SEC16A-207ENST00000453963 A0A1W2PP64 1363 aa13.63□□□□□ -0.23
SEC16A-207ENST00000453963 CPA1P15085 419 aa13.63□□□□□ -0.23
SEC16A-207ENST00000453963 RASAL2Q9UJF2 1139 aa13.63□□□□□ -0.23
SEC16A-207ENST00000453963 NIP7Q9Y221 180 aaKnown RBP eCLIP13.63□□□□□ -0.23
SEC16A-207ENST00000453963 YTHDC2Q9H6S0 1430 aaKnown RBP13.63□□□□□ -0.23
SEC16A-207ENST00000453963 PZPP20742 1482 aa13.63□□□□□ -0.23
SEC16A-207ENST00000453963 A0A1B0GUL7 405 aa13.63□□□□□ -0.23
SEC16A-207ENST00000453963 HLA-DOAP06340 250 aa13.63□□□□□ -0.23
SEC16A-207ENST00000453963 C17orf53Q8N3J3 647 aaPredicted RBP13.63□□□□□ -0.23
SEC16A-207ENST00000453963 LEO1Q8WVC0 666 aaPredicted RBP13.63□□□□□ -0.23
SEC16A-207ENST00000453963 CRNKL1Q9BZJ0 848 aaKnown RBP13.63□□□□□ -0.23
SEC16A-207ENST00000453963 NCKAP5LQ9HCH0 1330 aa13.63□□□□□ -0.23
SEC16A-207ENST00000453963 TRPM2O94759 1503 aa13.62□□□□□ -0.23
SEC16A-207ENST00000453963 GADD45BO75293 160 aaPredicted RBP13.62□□□□□ -0.23
SEC16A-207ENST00000453963 CTNNA2P26232 953 aa13.62□□□□□ -0.23
SEC16A-207ENST00000453963 UBXN1Q04323 297 aa13.62□□□□□ -0.23
SEC16A-207ENST00000453963 ELF2Q15723 593 aa13.62□□□□□ -0.23
SEC16A-207ENST00000453963 SLC9C2Q5TAH2 1124 aa13.62□□□□□ -0.23
SEC16A-207ENST00000453963 MSL1Q68DK7 614 aa13.62□□□□□ -0.23
SEC16A-207ENST00000453963 KRBA2Q6ZNG9 492 aa13.62□□□□□ -0.23
SEC16A-207ENST00000453963 IP6K1Q92551 441 aa13.62□□□□□ -0.23
SEC16A-207ENST00000453963 CALML3P27482 149 aa13.62□□□□□ -0.23
SEC16A-207ENST00000453963 STX17P56962 302 aa13.62□□□□□ -0.23
SEC16A-207ENST00000453963 MMRN2Q9H8L6 949 aa13.62□□□□□ -0.23
SEC16A-207ENST00000453963 BCL2L12Q9HB09 334 aa13.62□□□□□ -0.23
SEC16A-207ENST00000453963 A6NNZ2 444 aa13.62□□□□□ -0.23
SEC16A-207ENST00000453963 CALM1P0DP23 149 aa13.62□□□□□ -0.23
SEC16A-207ENST00000453963 CALM2P0DP24 149 aa13.62□□□□□ -0.23
SEC16A-207ENST00000453963 CALM3P0DP25 149 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms