RNA–Protein interactions for RNA: ENST00000449709.1

HMGB3P8-201, Transcript of high mobility group box 3 pseudogene 8, humanhuman

BASIC

Gene HMGB3P8, Length 577 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P8-201ENST00000449709 NCAPGQ9BPX3 1015 aa4.45□□□□□ -1.7
HMGB3P8-201ENST00000449709 BRMS1Q9HCU9 246 aa4.45□□□□□ -1.7
HMGB3P8-201ENST00000449709 ZDHHC3Q9NYG2 299 aa4.45□□□□□ -1.7
HMGB3P8-201ENST00000449709 NOL7Q9UMY1 257 aaKnown RBP4.45□□□□□ -1.7
HMGB3P8-201ENST00000449709 MAP3K1Q13233 1512 aa4.45□□□□□ -1.7
HMGB3P8-201ENST00000449709 USP19O94966 1318 aa4.45□□□□□ -1.7
HMGB3P8-201ENST00000449709 KIF16BQ96L93 1317 aa4.45□□□□□ -1.7
HMGB3P8-201ENST00000449709 SHROOM2Q13796 1616 aa4.44□□□□□ -1.7
HMGB3P8-201ENST00000449709 UQCRHLA0A096LP55 91 aa4.44□□□□□ -1.7
HMGB3P8-201ENST00000449709 TLDC2A0PJX2 215 aa4.44□□□□□ -1.7
HMGB3P8-201ENST00000449709 CCDC66A2RUB6 948 aa4.44□□□□□ -1.7
HMGB3P8-201ENST00000449709 ARHGEF15O94989 841 aa4.44□□□□□ -1.7
HMGB3P8-201ENST00000449709 UQCRHP07919 91 aa4.44□□□□□ -1.7
HMGB3P8-201ENST00000449709 FGRP09769 529 aa4.44□□□□□ -1.7
HMGB3P8-201ENST00000449709 NOP2P46087 812 aaKnown RBP4.44□□□□□ -1.7
HMGB3P8-201ENST00000449709 GJA8P48165 433 aa4.44□□□□□ -1.7
HMGB3P8-201ENST00000449709 IDH3AP50213 366 aa4.44□□□□□ -1.7
HMGB3P8-201ENST00000449709 ARSDP51689 593 aa4.44□□□□□ -1.7
HMGB3P8-201ENST00000449709 TRIP4Q15650 581 aaPredicted RBP4.44□□□□□ -1.7
HMGB3P8-201ENST00000449709 PDE12Q6L8Q7 609 aaKnown RBP4.44□□□□□ -1.7
HMGB3P8-201ENST00000449709 CTR9Q6PD62 1173 aa4.44□□□□□ -1.7
HMGB3P8-201ENST00000449709 LYPD4Q6UWN0 246 aa4.44□□□□□ -1.7
HMGB3P8-201ENST00000449709 ERMP1Q7Z2K6 904 aa4.44□□□□□ -1.7
HMGB3P8-201ENST00000449709 VPS37DQ86XT2 251 aa4.44□□□□□ -1.7
HMGB3P8-201ENST00000449709 MCF2L2Q86YR7 1114 aa4.44□□□□□ -1.7
HMGB3P8-201ENST00000449709 MYRIPQ8NFW9 859 aa4.44□□□□□ -1.7
HMGB3P8-201ENST00000449709 SNX29Q8TEQ0 813 aa4.44□□□□□ -1.7
HMGB3P8-201ENST00000449709 FEZ1Q99689 392 aa4.44□□□□□ -1.7
HMGB3P8-201ENST00000449709 HIRIP3Q9BW71 556 aaPredicted RBP4.44□□□□□ -1.7
HMGB3P8-201ENST00000449709 SRCIN1Q9C0H9 1055 aa4.44□□□□□ -1.7
HMGB3P8-201ENST00000449709 FAM8A1Q9UBU6 413 aa4.44□□□□□ -1.7
HMGB3P8-201ENST00000449709 FNDC3AQ9Y2H6 1198 aaKnown RBP4.44□□□□□ -1.7
HMGB3P8-201ENST00000449709 KCNMB2Q9Y691 235 aa4.44□□□□□ -1.7
HMGB3P8-201ENST00000449709 ABCC8Q09428 1581 aa4.44□□□□□ -1.7
HMGB3P8-201ENST00000449709 NPC1L1Q9UHC9 1359 aa4.43□□□□□ -1.7
HMGB3P8-201ENST00000449709 SPATA31C2B4DYI2 1134 aa4.43□□□□□ -1.7
HMGB3P8-201ENST00000449709 GPR25O00155 361 aa4.43□□□□□ -1.7
HMGB3P8-201ENST00000449709 KIF1CO43896 1103 aaKnown RBP4.43□□□□□ -1.7
HMGB3P8-201ENST00000449709 USP17L7P0C7H9 530 aa4.43□□□□□ -1.7
HMGB3P8-201ENST00000449709 ATF4P18848 351 aaPredicted RBP4.43□□□□□ -1.7
HMGB3P8-201ENST00000449709 HMGN5P82970 282 aaKnown RBP4.43□□□□□ -1.7
HMGB3P8-201ENST00000449709 MAP2K1Q02750 393 aaPredicted RBP4.43□□□□□ -1.7
HMGB3P8-201ENST00000449709 ZKSCAN8Q15776 578 aaPredicted RBP4.43□□□□□ -1.7
HMGB3P8-201ENST00000449709 SLC27A3Q5K4L6 730 aa4.43□□□□□ -1.7
HMGB3P8-201ENST00000449709 SOGA3Q5TF21 947 aa4.43□□□□□ -1.7
HMGB3P8-201ENST00000449709 ZNF438Q7Z4V0 828 aa4.43□□□□□ -1.7
HMGB3P8-201ENST00000449709 OTUD6BQ8N6M0 293 aa4.43□□□□□ -1.7
HMGB3P8-201ENST00000449709 ANKRD7Q92527 254 aa4.43□□□□□ -1.7
HMGB3P8-201ENST00000449709 AIDAQ96BJ3 306 aa4.43□□□□□ -1.7
HMGB3P8-201ENST00000449709 ZNF837Q96EG3 531 aaPredicted RBP4.43□□□□□ -1.7
HMGB3P8-201ENST00000449709 HSH2DQ96JZ2 352 aa4.43□□□□□ -1.7
HMGB3P8-201ENST00000449709 TIGD1Q96MW7 591 aa4.43□□□□□ -1.7
HMGB3P8-201ENST00000449709 MYCBPQ99417 103 aaPredicted RBP4.43□□□□□ -1.7
HMGB3P8-201ENST00000449709 PSMD1Q99460 953 aa4.43□□□□□ -1.7
HMGB3P8-201ENST00000449709 PIF1Q9H611 641 aa4.43□□□□□ -1.7
HMGB3P8-201ENST00000449709 ELP3Q9H9T3 547 aa4.43□□□□□ -1.7
HMGB3P8-201ENST00000449709 TMEM63CQ9P1W3 806 aa4.43□□□□□ -1.7
HMGB3P8-201ENST00000449709 USP20Q9Y2K6 914 aa4.43□□□□□ -1.7
HMGB3P8-201ENST00000449709 RTCBQ9Y3I0 505 aaKnown RBP4.43□□□□□ -1.7
HMGB3P8-201ENST00000449709 KIF3AQ9Y496 699 aa4.43□□□□□ -1.7
HMGB3P8-201ENST00000449709 CEP83Q9Y592 693 aa4.43□□□□□ -1.7
HMGB3P8-201ENST00000449709 NCOA1Q15788 1441 aa4.43□□□□□ -1.7
HMGB3P8-201ENST00000449709 BAZ1AQ9NRL2 1556 aaPredicted RBP4.43□□□□□ -1.7
HMGB3P8-201ENST00000449709 LRPPRCP42704 1394 aaKnown RBP4.42□□□□□ -1.7
HMGB3P8-201ENST00000449709 KTN1Q86UP2 1357 aaKnown RBP4.42□□□□□ -1.7
HMGB3P8-201ENST00000449709 ANKRD62A6NC57 917 aa4.42□□□□□ -1.7
HMGB3P8-201ENST00000449709 UBAP1LF5GYI3 381 aa4.42□□□□□ -1.7
HMGB3P8-201ENST00000449709 RNF225M0QZC1 329 aaPredicted RBP4.42□□□□□ -1.7
HMGB3P8-201ENST00000449709 PHACTR2O75167 634 aa4.42□□□□□ -1.7
HMGB3P8-201ENST00000449709 APPP05067 770 aa4.42□□□□□ -1.7
HMGB3P8-201ENST00000449709 SLFN14P0C7P3 912 aa4.42□□□□□ -1.7
HMGB3P8-201ENST00000449709 CCDC172P0C7W6 258 aa4.42□□□□□ -1.7
HMGB3P8-201ENST00000449709 TATP17735 454 aaPredicted RBP4.42□□□□□ -1.7
HMGB3P8-201ENST00000449709 GRNP28799 593 aaKnown RBP4.42□□□□□ -1.7
HMGB3P8-201ENST00000449709 MCM4P33991 863 aa4.42□□□□□ -1.7
HMGB3P8-201ENST00000449709 SRSF11Q05519 484 aaKnown RBP4.42□□□□□ -1.7
HMGB3P8-201ENST00000449709 POU4F2Q12837 409 aa4.42□□□□□ -1.7
HMGB3P8-201ENST00000449709 PAK2Q13177 524 aa4.42□□□□□ -1.7
HMGB3P8-201ENST00000449709 DBN1Q16643 649 aa4.42□□□□□ -1.7
HMGB3P8-201ENST00000449709 ATP2B3Q16720 1220 aa4.42□□□□□ -1.7
HMGB3P8-201ENST00000449709 CT47A1Q5JQC4 288 aaPredicted RBP4.42□□□□□ -1.7
HMGB3P8-201ENST00000449709 NXPE4Q6UWF7 544 aa4.42□□□□□ -1.7
HMGB3P8-201ENST00000449709 RIPOR1Q6ZS17 1223 aa4.42□□□□□ -1.7
HMGB3P8-201ENST00000449709 BTLAQ7Z6A9 289 aa4.42□□□□□ -1.7
HMGB3P8-201ENST00000449709 GALNT12Q8IXK2 581 aa4.42□□□□□ -1.7
HMGB3P8-201ENST00000449709 CMTR1Q8N1G2 835 aaKnown RBP4.42□□□□□ -1.7
HMGB3P8-201ENST00000449709 PMFBP1Q8TBY8 1022 aa4.42□□□□□ -1.7
HMGB3P8-201ENST00000449709 RASGRP4Q8TDF6 673 aa4.42□□□□□ -1.7
HMGB3P8-201ENST00000449709 SIN3AQ96ST3 1273 aa4.42□□□□□ -1.7
HMGB3P8-201ENST00000449709 CHRDQ9H2X0 955 aa4.42□□□□□ -1.7
HMGB3P8-201ENST00000449709 PRDM16Q9HAZ2 1276 aa4.42□□□□□ -1.7
HMGB3P8-201ENST00000449709 NPHS2Q9NP85 383 aa4.42□□□□□ -1.7
HMGB3P8-201ENST00000449709 COPRSQ9NQ92 184 aa4.42□□□□□ -1.7
HMGB3P8-201ENST00000449709 FAM53CQ9NYF3 392 aa4.42□□□□□ -1.7
HMGB3P8-201ENST00000449709 DONSONQ9NYP3 566 aa4.42□□□□□ -1.7
HMGB3P8-201ENST00000449709 ANKIB1Q9P2G1 1089 aa4.42□□□□□ -1.7
HMGB3P8-201ENST00000449709 CGNQ9P2M7 1197 aaKnown RBP4.42□□□□□ -1.7
HMGB3P8-201ENST00000449709 TMA7Q9Y2S6 64 aaKnown RBP4.42□□□□□ -1.7
HMGB3P8-201ENST00000449709 TBX22Q9Y458 520 aa4.42□□□□□ -1.7
HMGB3P8-201ENST00000449709 RTEL1-TNFRSF6BF6WH68 1400 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms