RNA–Protein interactions for RNA: ENST00000443638.1

TM9SF3-202, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 3

Gene TM9SF3, Length 868 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-202ENST00000443638 CNTNAP3Q9BZ76 1288 aa7.22□□□□□ -1.25
TM9SF3-202ENST00000443638 ZFAND3Q9H8U3 227 aa7.22□□□□□ -1.25
TM9SF3-202ENST00000443638 PRR12Q9ULL5 1215 aa7.22□□□□□ -1.25
TM9SF3-202ENST00000443638 FAM221AA4D161 298 aa7.21□□□□□ -1.26
TM9SF3-202ENST00000443638 ZIC2O95409 532 aaPredicted RBP7.21□□□□□ -1.26
TM9SF3-202ENST00000443638 F13A1P00488 732 aa7.21□□□□□ -1.26
TM9SF3-202ENST00000443638 ITPKAP23677 461 aa7.21□□□□□ -1.26
TM9SF3-202ENST00000443638 CASP7P55210 303 aa7.21□□□□□ -1.26
TM9SF3-202ENST00000443638 TTC39BQ5VTQ0 682 aaPredicted RBP7.21□□□□□ -1.26
TM9SF3-202ENST00000443638 FERMT3Q86UX7 667 aa7.21□□□□□ -1.26
TM9SF3-202ENST00000443638 SYNPOQ8N3V7 929 aa7.21□□□□□ -1.26
TM9SF3-202ENST00000443638 PRPF38AQ8NAV1 312 aaKnown RBP7.21□□□□□ -1.26
TM9SF3-202ENST00000443638 OR13H1Q8NG92 308 aa7.21□□□□□ -1.26
TM9SF3-202ENST00000443638 MORC4Q8TE76 937 aa7.21□□□□□ -1.26
TM9SF3-202ENST00000443638 NECAB3Q96P71 396 aaPredicted RBP7.21□□□□□ -1.26
TM9SF3-202ENST00000443638 TNKS2Q9H2K2 1166 aa7.21□□□□□ -1.26
TM9SF3-202ENST00000443638 LIN7BQ9HAP6 207 aa7.21□□□□□ -1.26
TM9SF3-202ENST00000443638 ZFYVE1Q9HBF4 777 aa7.21□□□□□ -1.26
TM9SF3-202ENST00000443638 KANSL3Q9P2N6 904 aa7.21□□□□□ -1.26
TM9SF3-202ENST00000443638 ZNRF3Q9ULT6 936 aa7.21□□□□□ -1.26
TM9SF3-202ENST00000443638 PTCH2Q9Y6C5 1203 aa7.21□□□□□ -1.26
TM9SF3-202ENST00000443638 CDKN1CP49918 316 aaPredicted RBP7.2□□□□□ -1.26
TM9SF3-202ENST00000443638 TCEA2Q15560 299 aa7.2□□□□□ -1.26
TM9SF3-202ENST00000443638 WDR44Q5JSH3 913 aa7.2□□□□□ -1.26
TM9SF3-202ENST00000443638 TTBK2Q6IQ55 1244 aa7.2□□□□□ -1.26
TM9SF3-202ENST00000443638 BNC2Q6ZN30 1099 aaPredicted RBP7.2□□□□□ -1.26
TM9SF3-202ENST00000443638 BICDL1Q6ZP65 573 aa7.2□□□□□ -1.26
TM9SF3-202ENST00000443638 REXO1Q8N1G1 1221 aaKnown RBP7.2□□□□□ -1.26
TM9SF3-202ENST00000443638 PMM1Q92871 262 aa7.2□□□□□ -1.26
TM9SF3-202ENST00000443638 C8orf48Q96LL4 319 aa7.2□□□□□ -1.26
TM9SF3-202ENST00000443638 HOMER2Q9NSB8 354 aa7.2□□□□□ -1.26
TM9SF3-202ENST00000443638 GEMIN8Q9NWZ8 242 aaKnown RBP7.2□□□□□ -1.26
TM9SF3-202ENST00000443638 PLAAQ9Y263 795 aa7.2□□□□□ -1.26
TM9SF3-202ENST00000443638 DIAPH1O60610 1272 aaKnown RBP7.19□□□□□ -1.26
TM9SF3-202ENST00000443638 ALDH1A1P00352 501 aa7.19□□□□□ -1.26
TM9SF3-202ENST00000443638 TIMP2P16035 220 aa7.19□□□□□ -1.26
TM9SF3-202ENST00000443638 PHKA2P46019 1235 aa7.19□□□□□ -1.26
TM9SF3-202ENST00000443638 EXOSC10Q01780 885 aaKnown RBP7.19□□□□□ -1.26
TM9SF3-202ENST00000443638 SEPT6Q14141 434 aa7.19□□□□□ -1.26
TM9SF3-202ENST00000443638 FXNQ16595 210 aa7.19□□□□□ -1.26
TM9SF3-202ENST00000443638 LSRQ86X29 649 aaPredicted RBP7.19□□□□□ -1.26
TM9SF3-202ENST00000443638 SMC5Q8IY18 1101 aa7.19□□□□□ -1.26
TM9SF3-202ENST00000443638 CCDC146Q8IYE0 955 aa7.19□□□□□ -1.26
TM9SF3-202ENST00000443638 MEIOBQ8N635 442 aa7.19□□□□□ -1.26
TM9SF3-202ENST00000443638 GATAD2BQ8WXI9 593 aa7.19□□□□□ -1.26
TM9SF3-202ENST00000443638 ZNF669Q96BR6 464 aaPredicted RBP7.19□□□□□ -1.26
TM9SF3-202ENST00000443638 SGSM3Q96HU1 749 aa7.19□□□□□ -1.26
TM9SF3-202ENST00000443638 EID1Q9Y6B2 187 aa7.19□□□□□ -1.26
TM9SF3-202ENST00000443638 PAGE1O75459 146 aa7.18□□□□□ -1.26
TM9SF3-202ENST00000443638 TRIM37O94972 964 aa7.18□□□□□ -1.26
TM9SF3-202ENST00000443638 GJB6O95452 261 aa7.18□□□□□ -1.26
TM9SF3-202ENST00000443638 SLC19A1P41440 591 aa7.18□□□□□ -1.26
TM9SF3-202ENST00000443638 GRIA4P48058 902 aa7.18□□□□□ -1.26
TM9SF3-202ENST00000443638 KCNQ4P56696 695 aa7.18□□□□□ -1.26
TM9SF3-202ENST00000443638 MPP2Q14168 576 aa7.18□□□□□ -1.26
TM9SF3-202ENST00000443638 MTERF2Q49AM1 385 aa7.18□□□□□ -1.26
TM9SF3-202ENST00000443638 TM4SF20Q53R12 229 aa7.18□□□□□ -1.26
TM9SF3-202ENST00000443638 TMED8Q6PL24 325 aaPredicted RBP7.18□□□□□ -1.26
TM9SF3-202ENST00000443638 TRIM67Q6ZTA4 783 aa7.18□□□□□ -1.26
TM9SF3-202ENST00000443638 SPATC1Q76KD6 591 aa7.18□□□□□ -1.26
TM9SF3-202ENST00000443638 JAMLQ86YT9 394 aa7.18□□□□□ -1.26
TM9SF3-202ENST00000443638 RELTQ969Z4 430 aa7.18□□□□□ -1.26
TM9SF3-202ENST00000443638 ZKSCAN3Q9BRR0 538 aa7.18□□□□□ -1.26
TM9SF3-202ENST00000443638 FAM126AQ9BYI3 521 aaPredicted RBP7.18□□□□□ -1.26
TM9SF3-202ENST00000443638 ATP8A1Q9Y2Q0 1164 aa7.18□□□□□ -1.26
TM9SF3-202ENST00000443638 CD2APQ9Y5K6 639 aa7.18□□□□□ -1.26
TM9SF3-202ENST00000443638 TLR3O15455 904 aaKnown RBP7.17□□□□□ -1.26
TM9SF3-202ENST00000443638 SPINT1O43278 529 aa7.17□□□□□ -1.26
TM9SF3-202ENST00000443638 PRC1O43663 620 aa7.17□□□□□ -1.26
TM9SF3-202ENST00000443638 CILPO75339 1184 aa7.17□□□□□ -1.26
TM9SF3-202ENST00000443638 KIF4AO95239 1232 aa7.17□□□□□ -1.26
TM9SF3-202ENST00000443638 IMPDH2P12268 514 aa7.17□□□□□ -1.26
TM9SF3-202ENST00000443638 ZNF165P49910 485 aa7.17□□□□□ -1.26
TM9SF3-202ENST00000443638 WDR4P57081 412 aaKnown RBP7.17□□□□□ -1.26
TM9SF3-202ENST00000443638 BRDTQ58F21 947 aaPredicted RBP7.17□□□□□ -1.26
TM9SF3-202ENST00000443638 RPS26P11Q5JNZ5 115 aaPredicted RBP7.17□□□□□ -1.26
TM9SF3-202ENST00000443638 RAVER1Q8IY67 606 aaKnown RBP7.17□□□□□ -1.26
TM9SF3-202ENST00000443638 C19orf47Q8N9M1 422 aaKnown RBP7.17□□□□□ -1.26
TM9SF3-202ENST00000443638 ST13P5Q8NFI4 369 aaPredicted RBP7.17□□□□□ -1.26
TM9SF3-202ENST00000443638 ZNF526Q8TF50 670 aaPredicted RBP7.17□□□□□ -1.26
TM9SF3-202ENST00000443638 CEP63Q96MT8 703 aa7.17□□□□□ -1.26
TM9SF3-202ENST00000443638 FERD3LQ96RJ6 166 aa7.17□□□□□ -1.26
TM9SF3-202ENST00000443638 CRBNQ96SW2 442 aa7.17□□□□□ -1.26
TM9SF3-202ENST00000443638 INSM2Q96T92 566 aaPredicted RBP7.17□□□□□ -1.26
TM9SF3-202ENST00000443638 SEC31BQ9NQW1 1179 aa7.17□□□□□ -1.26
TM9SF3-202ENST00000443638 ZMYM5Q9UJ78 669 aa7.17□□□□□ -1.26
TM9SF3-202ENST00000443638 A0A1W2PNR3 127 aa7.16□□□□□ -1.26
TM9SF3-202ENST00000443638 MMP20O60882 483 aa7.16□□□□□ -1.26
TM9SF3-202ENST00000443638 EIF3JO75822 258 aaKnown RBP7.16□□□□□ -1.26
TM9SF3-202ENST00000443638 DGAT1O75907 488 aa7.16□□□□□ -1.26
TM9SF3-202ENST00000443638 ASMTLO95671 621 aa7.16□□□□□ -1.26
TM9SF3-202ENST00000443638 HOXD8P13378 290 aaPredicted RBP7.16□□□□□ -1.26
TM9SF3-202ENST00000443638 MSX1P28360 303 aa7.16□□□□□ -1.26
TM9SF3-202ENST00000443638 PRR20EP86478 221 aa7.16□□□□□ -1.26
TM9SF3-202ENST00000443638 PRR20CP86479 221 aa7.16□□□□□ -1.26
TM9SF3-202ENST00000443638 PRR20DP86480 221 aa7.16□□□□□ -1.26
TM9SF3-202ENST00000443638 PRR20BP86481 221 aa7.16□□□□□ -1.26
TM9SF3-202ENST00000443638 PRR20AP86496 221 aa7.16□□□□□ -1.26
TM9SF3-202ENST00000443638 FAAP100Q0VG06 881 aa7.16□□□□□ -1.26
TM9SF3-202ENST00000443638 POU4F2Q12837 409 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms