RNA–Protein interactions for RNA: ENST00000441350.2

VPS13B-204, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 1,626 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-204ENST00000441350 TTF1Q15361 905 aaPredicted RBP25.57■■□□□ 1.68
VPS13B-204ENST00000441350 TICAM2Q86XR7 235 aa25.57■■□□□ 1.68
VPS13B-204ENST00000441350 FSD1Q9BTV5 496 aa25.57■■□□□ 1.68
VPS13B-204ENST00000441350 GOLGB1Q14789 3259 aaKnown RBP25.56■■□□□ 1.68
VPS13B-204ENST00000441350 FRAT2O75474 233 aaPredicted RBP25.56■■□□□ 1.68
VPS13B-204ENST00000441350 CHMLP26374 656 aa25.56■■□□□ 1.68
VPS13B-204ENST00000441350 BACH2Q9BYV9 841 aa25.56■■□□□ 1.68
VPS13B-204ENST00000441350 VPS33BQ9H267 617 aa25.56■■□□□ 1.68
VPS13B-204ENST00000441350 RFX7Q2KHR2 1363 aa25.56■■□□□ 1.68
VPS13B-204ENST00000441350 CHD4Q14839 1912 aa25.56■■□□□ 1.68
VPS13B-204ENST00000441350 PIH1D3Q9NQM4 214 aaKnown RBP25.55■■□□□ 1.68
VPS13B-204ENST00000441350 MYO5AQ9Y4I1 1855 aaKnown RBP25.55■■□□□ 1.68
VPS13B-204ENST00000441350 DOCK2Q92608 1830 aa25.54■■□□□ 1.68
VPS13B-204ENST00000441350 NFKBIEO00221 500 aa25.54■■□□□ 1.68
VPS13B-204ENST00000441350 AOC3Q16853 763 aa25.54■■□□□ 1.68
VPS13B-204ENST00000441350 DOK7Q18PE1 504 aa25.54■■□□□ 1.68
VPS13B-204ENST00000441350 LTBP3Q9NS15 1303 aa25.53■■□□□ 1.68
VPS13B-204ENST00000441350 TAOK3Q9H2K8 898 aa25.53■■□□□ 1.68
VPS13B-204ENST00000441350 HIP1O00291 1037 aa25.52■■□□□ 1.68
VPS13B-204ENST00000441350 PPIP5K2O43314 1243 aa25.52■■□□□ 1.68
VPS13B-204ENST00000441350 CASC1Q6TDU7 716 aa25.52■■□□□ 1.68
VPS13B-204ENST00000441350 PODNQ7Z5L7 613 aa25.52■■□□□ 1.68
VPS13B-204ENST00000441350 FAM205AQ6ZU69 1335 aa25.52■■□□□ 1.68
VPS13B-204ENST00000441350 MYH7P12883 1935 aa25.52■■□□□ 1.68
VPS13B-204ENST00000441350 CHAF1AQ13111 956 aaPredicted RBP25.52■■□□□ 1.68
VPS13B-204ENST00000441350 WDR66Q8TBY9 1149 aa25.52■■□□□ 1.68
VPS13B-204ENST00000441350 ZNF277Q9NRM2 450 aaPredicted RBP25.52■■□□□ 1.68
VPS13B-204ENST00000441350 SALL1Q9NSC2 1324 aa25.51■■□□□ 1.67
VPS13B-204ENST00000441350 SRCAPQ6ZRS2 3230 aa25.51■■□□□ 1.67
VPS13B-204ENST00000441350 G3V3G9 751 aa25.51■■□□□ 1.67
VPS13B-204ENST00000441350 DCAF8Q5TAQ9 597 aa25.51■■□□□ 1.67
VPS13B-204ENST00000441350 DBNDD1Q9H9R9 158 aa25.51■■□□□ 1.67
VPS13B-204ENST00000441350 DIAPH3Q9NSV4 1193 aa25.5■■□□□ 1.67
VPS13B-204ENST00000441350 ECE2O60344 883 aa25.49■■□□□ 1.67
VPS13B-204ENST00000441350 LRRFIP1Q32MZ4 808 aaKnown RBP25.49■■□□□ 1.67
VPS13B-204ENST00000441350 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.49■■□□□ 1.674e-7■■■■□ 24.4
VPS13B-204ENST00000441350 JAG2Q9Y219 1238 aa25.49■■□□□ 1.67
VPS13B-204ENST00000441350 COL4A5P29400 1685 aa25.49■■□□□ 1.67
VPS13B-204ENST00000441350 RNF113AO15541 343 aaKnown RBP25.48■■□□□ 1.67
VPS13B-204ENST00000441350 IDH1O75874 414 aaKnown RBP25.48■■□□□ 1.67
VPS13B-204ENST00000441350 ZFYP08048 801 aaPredicted RBP25.48■■□□□ 1.67
VPS13B-204ENST00000441350 IARSP41252 1262 aaKnown RBP25.48■■□□□ 1.67
VPS13B-204ENST00000441350 SCN9AQ15858 1988 aa25.48■■□□□ 1.67
VPS13B-204ENST00000441350 SEC24BO95487 1268 aa25.48■■□□□ 1.67
VPS13B-204ENST00000441350 CHGBP05060 677 aa25.48■■□□□ 1.67
VPS13B-204ENST00000441350 MAP3K12Q12852 859 aa25.48■■□□□ 1.67
VPS13B-204ENST00000441350 LARGE2Q8N3Y3 721 aa25.48■■□□□ 1.67
VPS13B-204ENST00000441350 ESYT1Q9BSJ8 1104 aa25.48■■□□□ 1.67
VPS13B-204ENST00000441350 LRP2BPQ9P2M1 347 aa25.48■■□□□ 1.67
VPS13B-204ENST00000441350 ABCF2Q9UG63 623 aa25.48■■□□□ 1.67
VPS13B-204ENST00000441350 GTF2IP78347 998 aa25.47■■□□□ 1.67
VPS13B-204ENST00000441350 NMIQ13287 307 aaPredicted RBP25.47■■□□□ 1.67
VPS13B-204ENST00000441350 ZSCAN25Q6NSZ9 544 aa25.47■■□□□ 1.67
VPS13B-204ENST00000441350 CWC27Q6UX04 472 aaKnown RBP25.47■■□□□ 1.67
VPS13B-204ENST00000441350 ZGPATQ8N5A5 531 aaKnown RBP25.47■■□□□ 1.67
VPS13B-204ENST00000441350 FAM227BQ96M60 508 aa25.47■■□□□ 1.67
VPS13B-204ENST00000441350 ADD2P35612 726 aa25.46■■□□□ 1.67
VPS13B-204ENST00000441350 SLC9C2Q5TAH2 1124 aa25.46■■□□□ 1.67
VPS13B-204ENST00000441350 TBC1D22AQ8WUA7 517 aa25.46■■□□□ 1.67
VPS13B-204ENST00000441350 ZNF646O15015 1829 aaPredicted RBP25.46■■□□□ 1.67
VPS13B-204ENST00000441350 A0A0D9SFI3 127 aa25.45■■□□□ 1.67
VPS13B-204ENST00000441350 YDJCA8MPS7 323 aa25.45■■□□□ 1.67
VPS13B-204ENST00000441350 IGSF3O75054 1194 aa25.45■■□□□ 1.67
VPS13B-204ENST00000441350 PDE6AP16499 860 aa25.45■■□□□ 1.67
VPS13B-204ENST00000441350 UBE3CQ15386 1083 aa25.45■■□□□ 1.67
VPS13B-204ENST00000441350 SLFNL1Q499Z3 407 aa25.45■■□□□ 1.67
VPS13B-204ENST00000441350 ZMYM1Q5SVZ6 1142 aa25.45■■□□□ 1.67
VPS13B-204ENST00000441350 SPTY2D1Q68D10 685 aaPredicted RBP25.45■■□□□ 1.67
VPS13B-204ENST00000441350 TTLL5Q6EMB2 1281 aa25.45■■□□□ 1.67
VPS13B-204ENST00000441350 RUFY2Q8WXA3 655 aa25.45■■□□□ 1.67
VPS13B-204ENST00000441350 IL25Q9H293 177 aa25.45■■□□□ 1.67
VPS13B-204ENST00000441350 KCNQ5Q9NR82 932 aa25.45■■□□□ 1.67
VPS13B-204ENST00000441350 TCRBV5S4A2TA0A5A2 114 aa25.45■■□□□ 1.66
VPS13B-204ENST00000441350 SGSM2O43147 1006 aa25.45■■□□□ 1.66
VPS13B-204ENST00000441350 YBX3P16989 372 aaKnown RBP eCLIP25.45■■□□□ 1.66
VPS13B-204ENST00000441350 RASSF7Q02833 373 aa25.45■■□□□ 1.66
VPS13B-204ENST00000441350 ERICH6Q7L0X2 663 aa25.45■■□□□ 1.66
VPS13B-204ENST00000441350 PRDX5P30044 214 aa25.44■■□□□ 1.66
VPS13B-204ENST00000441350 MFSD14BQ5SR56 506 aa25.44■■□□□ 1.66
VPS13B-204ENST00000441350 STRIP1Q5VSL9 837 aa25.44■■□□□ 1.66
VPS13B-204ENST00000441350 RAI14Q9P0K7 980 aa25.44■■□□□ 1.66
VPS13B-204ENST00000441350 PSME4Q14997 1843 aa25.43■■□□□ 1.66
VPS13B-204ENST00000441350 PRELPP51888 382 aa25.43■■□□□ 1.66
VPS13B-204ENST00000441350 ARHGAP27Q6ZUM4 889 aa25.43■■□□□ 1.66
VPS13B-204ENST00000441350 NIM1KQ8IY84 436 aa25.43■■□□□ 1.66
VPS13B-204ENST00000441350 MAGEB6Q8N7X4 407 aa25.43■■□□□ 1.66
VPS13B-204ENST00000441350 HELLSQ9NRZ9 838 aa25.43■■□□□ 1.66
VPS13B-204ENST00000441350 RAD50Q92878 1312 aa25.43■■□□□ 1.66
VPS13B-204ENST00000441350 CCDC88AQ3V6T2 1871 aa25.42■■□□□ 1.66
VPS13B-204ENST00000441350 GRIK5Q16478 980 aa25.42■■□□□ 1.66
VPS13B-204ENST00000441350 ZNF384Q8TF68 577 aa25.42■■□□□ 1.66
VPS13B-204ENST00000441350 APPBP2Q92624 585 aa25.42■■□□□ 1.66
VPS13B-204ENST00000441350 ZNRF3Q9ULT6 936 aa25.42■■□□□ 1.66
VPS13B-204ENST00000441350 ZNF532Q9HCE3 1301 aa25.42■■□□□ 1.66
VPS13B-204ENST00000441350 MAST2Q6P0Q8 1798 aa25.42■■□□□ 1.66
VPS13B-204ENST00000441350 USP17L3A6NCW0 530 aa25.41■■□□□ 1.66
VPS13B-204ENST00000441350 USP17L4A6NCW7 530 aa25.41■■□□□ 1.66
VPS13B-204ENST00000441350 EIF5BO60841 1220 aaKnown RBP25.41■■□□□ 1.66
VPS13B-204ENST00000441350 LDHBP07195 334 aaKnown RBP25.41■■□□□ 1.66
VPS13B-204ENST00000441350 FKBP1AP62942 108 aaKnown RBP25.41■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms