RNA–Protein interactions for RNA: ENST00000438317.5

ERGIC3-207, Transcript of ERGIC and golgi 3, humanhuman

TSL 3

Gene ERGIC3, Length 590 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-207ENST00000438317 RPS6KB1P23443 525 aa13.13□□□□□ -0.31
ERGIC3-207ENST00000438317 IFIT5Q13325 482 aaKnown RBP13.13□□□□□ -0.31
ERGIC3-207ENST00000438317 CSPP1Q1MSJ5 1256 aa13.13□□□□□ -0.31
ERGIC3-207ENST00000438317 ADCK5Q3MIX3 580 aa13.13□□□□□ -0.31
ERGIC3-207ENST00000438317 ERFEQ4G0M1 354 aa13.13□□□□□ -0.31
ERGIC3-207ENST00000438317 CCDC158Q5M9N0 1113 aa13.13□□□□□ -0.31
ERGIC3-207ENST00000438317 SYAP1Q96A49 352 aaPredicted RBP13.13□□□□□ -0.31
ERGIC3-207ENST00000438317 PAG1Q9NWQ8 432 aa13.13□□□□□ -0.31
ERGIC3-207ENST00000438317 SH3TC1Q8TE82 1336 aa13.13□□□□□ -0.31
ERGIC3-207ENST00000438317 ABCC12Q96J65 1359 aa13.12□□□□□ -0.31
ERGIC3-207ENST00000438317 STX6O43752 255 aa13.12□□□□□ -0.31
ERGIC3-207ENST00000438317 DDNO94850 711 aaPredicted RBP13.12□□□□□ -0.31
ERGIC3-207ENST00000438317 IFIT1P09914 478 aaKnown RBP13.12□□□□□ -0.31
ERGIC3-207ENST00000438317 ZSCAN22P10073 491 aaPredicted RBP13.12□□□□□ -0.31
ERGIC3-207ENST00000438317 IL6STP40189 918 aaPredicted RBP13.12□□□□□ -0.31
ERGIC3-207ENST00000438317 CTCFP49711 727 aaPredicted RBP13.12□□□□□ -0.31
ERGIC3-207ENST00000438317 TIMM10P62072 90 aa13.12□□□□□ -0.31
ERGIC3-207ENST00000438317 TAF7LQ5H9L4 462 aa13.12□□□□□ -0.31
ERGIC3-207ENST00000438317 DNAJC2Q99543 621 aaKnown RBP13.12□□□□□ -0.31
ERGIC3-207ENST00000438317 DSCC1Q9BVC3 393 aa13.12□□□□□ -0.31
ERGIC3-207ENST00000438317 ZBTB1Q9Y2K1 713 aa13.12□□□□□ -0.31
ERGIC3-207ENST00000438317 ANKRD31Q8N7Z5 1873 aa13.11□□□□□ -0.31
ERGIC3-207ENST00000438317 A0A1B0GUL7 405 aa13.11□□□□□ -0.31
ERGIC3-207ENST00000438317 C21orf2O43822 256 aa13.11□□□□□ -0.31
ERGIC3-207ENST00000438317 ZFYP08048 801 aaPredicted RBP13.11□□□□□ -0.31
ERGIC3-207ENST00000438317 HSP90B1P14625 803 aaKnown RBP13.11□□□□□ -0.31
ERGIC3-207ENST00000438317 VEGFBP49765 207 aa13.11□□□□□ -0.31
ERGIC3-207ENST00000438317 GORABQ5T7V8 394 aa13.11□□□□□ -0.31
ERGIC3-207ENST00000438317 NLRP10Q86W26 655 aa13.11□□□□□ -0.31
ERGIC3-207ENST00000438317 FAM43AQ8N2R8 423 aa13.11□□□□□ -0.31
ERGIC3-207ENST00000438317 TMEM87AQ8NBN3 555 aa13.11□□□□□ -0.31
ERGIC3-207ENST00000438317 ANP32BQ92688 251 aaKnown RBP13.11□□□□□ -0.31
ERGIC3-207ENST00000438317 WBP1LQ9NX94 342 aa13.11□□□□□ -0.31
ERGIC3-207ENST00000438317 RNF113AO15541 343 aaKnown RBP13.1□□□□□ -0.31
ERGIC3-207ENST00000438317 SYT1P21579 422 aa13.1□□□□□ -0.31
ERGIC3-207ENST00000438317 LBX1P52954 281 aa13.1□□□□□ -0.31
ERGIC3-207ENST00000438317 LRRC24Q50LG9 513 aa13.1□□□□□ -0.31
ERGIC3-207ENST00000438317 ZMYM1Q5SVZ6 1142 aa13.1□□□□□ -0.31
ERGIC3-207ENST00000438317 CAVIN1Q6NZI2 390 aaKnown RBP13.1□□□□□ -0.31
ERGIC3-207ENST00000438317 NEK1Q96PY6 1258 aa13.1□□□□□ -0.31
ERGIC3-207ENST00000438317 ZNF330Q9Y3S2 320 aaPredicted RBP13.1□□□□□ -0.31
ERGIC3-207ENST00000438317 ZNF609O15014 1411 aa13.1□□□□□ -0.31
ERGIC3-207ENST00000438317 LTBP3Q9NS15 1303 aa13.1□□□□□ -0.31
ERGIC3-207ENST00000438317 ANKRD18BA2A2Z9 1011 aa13.09□□□□□ -0.31
ERGIC3-207ENST00000438317 GOLIM4O00461 696 aa13.09□□□□□ -0.31
ERGIC3-207ENST00000438317 PDE8AO60658 829 aa13.09□□□□□ -0.31
ERGIC3-207ENST00000438317 ITGBL1O95965 494 aaPredicted RBP13.09□□□□□ -0.31
ERGIC3-207ENST00000438317 TTC39AQ5SRH9 613 aa13.09□□□□□ -0.31
ERGIC3-207ENST00000438317 ZNF589Q86UQ0 364 aaPredicted RBP13.09□□□□□ -0.31
ERGIC3-207ENST00000438317 GAS2L3Q86XJ1 694 aa13.09□□□□□ -0.31
ERGIC3-207ENST00000438317 CCDC83Q8IWF9 413 aa13.09□□□□□ -0.31
ERGIC3-207ENST00000438317 ZNF622Q969S3 477 aaKnown RBP eCLIP13.09□□□□□ -0.31
ERGIC3-207ENST00000438317 EDC3Q96F86 508 aaKnown RBP13.09□□□□□ -0.31
ERGIC3-207ENST00000438317 FAM89AQ96GI7 184 aa13.09□□□□□ -0.31
ERGIC3-207ENST00000438317 ZNF594Q96JF6 807 aaPredicted RBP13.09□□□□□ -0.31
ERGIC3-207ENST00000438317 ZNF512BQ96KM6 892 aaPredicted RBP13.09□□□□□ -0.31
ERGIC3-207ENST00000438317 ZNF219Q9P2Y4 722 aaPredicted RBP13.09□□□□□ -0.31
ERGIC3-207ENST00000438317 MYH7P12883 1935 aa13.09□□□□□ -0.31
ERGIC3-207ENST00000438317 LETM1O95202 739 aaPredicted RBP13.08□□□□□ -0.32
ERGIC3-207ENST00000438317 F13A1P00488 732 aa13.08□□□□□ -0.32
ERGIC3-207ENST00000438317 CPA1P15085 419 aa13.08□□□□□ -0.32
ERGIC3-207ENST00000438317 GJB2P29033 226 aa13.08□□□□□ -0.32
ERGIC3-207ENST00000438317 ME3Q16798 604 aa13.08□□□□□ -0.32
ERGIC3-207ENST00000438317 ZSCAN23Q3MJ62 389 aa13.08□□□□□ -0.32
ERGIC3-207ENST00000438317 FOXD4L5Q5VV16 416 aaPredicted RBP13.08□□□□□ -0.32
ERGIC3-207ENST00000438317 ZSCAN25Q6NSZ9 544 aa13.08□□□□□ -0.32
ERGIC3-207ENST00000438317 BICDL1Q6ZP65 573 aa13.08□□□□□ -0.32
ERGIC3-207ENST00000438317 DDX46Q7L014 1031 aaKnown RBP13.08□□□□□ -0.32
ERGIC3-207ENST00000438317 TTLL11Q8NHH1 800 aa13.08□□□□□ -0.32
ERGIC3-207ENST00000438317 GPT2Q8TD30 523 aa13.08□□□□□ -0.32
ERGIC3-207ENST00000438317 FOXD4L4Q8WXT5 416 aaPredicted RBP13.08□□□□□ -0.32
ERGIC3-207ENST00000438317 AIDAQ96BJ3 306 aa13.08□□□□□ -0.32
ERGIC3-207ENST00000438317 ABHD8Q96I13 439 aa13.08□□□□□ -0.32
ERGIC3-207ENST00000438317 BRIP1Q9BX63 1249 aa13.08□□□□□ -0.32
ERGIC3-207ENST00000438317 PUS3Q9BZE2 481 aaKnown RBP13.08□□□□□ -0.32
ERGIC3-207ENST00000438317 CTNNA3Q9UI47 895 aa13.08□□□□□ -0.32
ERGIC3-207ENST00000438317 RIPOR2Q9Y4F9 1068 aa13.08□□□□□ -0.32
ERGIC3-207ENST00000438317 COL11A2P13942 1736 aaPredicted RBP13.08□□□□□ -0.32
ERGIC3-207ENST00000438317 TMEM88BA6NKF7 163 aa13.07□□□□□ -0.32
ERGIC3-207ENST00000438317 HSPA8P11142 646 aaKnown RBP13.07□□□□□ -0.32
ERGIC3-207ENST00000438317 EIF5P55010 431 aaKnown RBP13.07□□□□□ -0.32
ERGIC3-207ENST00000438317 HLFQ16534 295 aa13.07□□□□□ -0.32
ERGIC3-207ENST00000438317 LARP1BQ659C4 914 aaKnown RBP13.07□□□□□ -0.32
ERGIC3-207ENST00000438317 TBC1D9BQ66K14 1250 aa13.07□□□□□ -0.32
ERGIC3-207ENST00000438317 PRR5LQ6MZQ0 368 aa13.07□□□□□ -0.32
ERGIC3-207ENST00000438317 LDHAL6AQ6ZMR3 332 aa13.07□□□□□ -0.32
ERGIC3-207ENST00000438317 USP48Q86UV5 1035 aa13.07□□□□□ -0.32
ERGIC3-207ENST00000438317 LDHDQ86WU2 507 aa13.07□□□□□ -0.32
ERGIC3-207ENST00000438317 DZIP3Q86Y13 1208 aaKnown RBP13.07□□□□□ -0.32
ERGIC3-207ENST00000438317 ZNF34Q8IZ26 560 aa13.07□□□□□ -0.32
ERGIC3-207ENST00000438317 CCDC24Q8N4L8 307 aa13.07□□□□□ -0.32
ERGIC3-207ENST00000438317 XAGE2Q96GT9 111 aa13.07□□□□□ -0.32
ERGIC3-207ENST00000438317 L3MBTL3Q96JM7 780 aaPredicted RBP13.07□□□□□ -0.32
ERGIC3-207ENST00000438317 TAOK3Q9H2K8 898 aa13.07□□□□□ -0.32
ERGIC3-207ENST00000438317 TAF1DQ9H5J8 278 aaPredicted RBP13.07□□□□□ -0.32
ERGIC3-207ENST00000438317 TRMT112Q9UI30 125 aaKnown RBP13.07□□□□□ -0.32
ERGIC3-207ENST00000438317 TPCN1Q9ULQ1 816 aa13.07□□□□□ -0.32
ERGIC3-207ENST00000438317 LAMA4Q16363 1823 aa13.06□□□□□ -0.32
ERGIC3-207ENST00000438317 IRS4O14654 1257 aaPredicted RBP13.06□□□□□ -0.32
ERGIC3-207ENST00000438317 PDE6BP35913 854 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms