RNA–Protein interactions for RNA: ENST00000433260.1

HMGB3P24-201, Transcript of high mobility group box 3 pseudogene 24, humanhuman

BASIC

Gene HMGB3P24, Length 622 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P24-201ENST00000433260 RBM26Q5T8P6 1007 aaKnown RBP7.22□□□□□ -1.25
HMGB3P24-201ENST00000433260 CIAPIN1Q6FI81 312 aa7.22□□□□□ -1.25
HMGB3P24-201ENST00000433260 TXNRD3Q86VQ6 643 aa7.22□□□□□ -1.25
HMGB3P24-201ENST00000433260 FTSJ3Q8IY81 847 aaKnown RBP7.22□□□□□ -1.25
HMGB3P24-201ENST00000433260 DZIP1LQ8IYY4 767 aaKnown RBP7.22□□□□□ -1.25
HMGB3P24-201ENST00000433260 PANK1Q8TE04 598 aa7.22□□□□□ -1.25
HMGB3P24-201ENST00000433260 RCAN3Q9UKA8 241 aa7.22□□□□□ -1.25
HMGB3P24-201ENST00000433260 ZNF804BA4D1E1 1349 aa7.22□□□□□ -1.25
HMGB3P24-201ENST00000433260 ZC3H4Q9UPT8 1303 aaKnown RBP7.22□□□□□ -1.25
HMGB3P24-201ENST00000433260 RTL9Q8NET4 1388 aa7.21□□□□□ -1.25
HMGB3P24-201ENST00000433260 DUOX1Q9NRD9 1551 aa7.21□□□□□ -1.25
HMGB3P24-201ENST00000433260 SRCAPQ6ZRS2 3230 aa7.21□□□□□ -1.26
HMGB3P24-201ENST00000433260 TBC1D12O60347 775 aa7.21□□□□□ -1.26
HMGB3P24-201ENST00000433260 GNAI3P08754 354 aa7.21□□□□□ -1.26
HMGB3P24-201ENST00000433260 RLBP1P12271 317 aa7.21□□□□□ -1.26
HMGB3P24-201ENST00000433260 KLRK1P26718 216 aa7.21□□□□□ -1.26
HMGB3P24-201ENST00000433260 LMOD1P29536 600 aaPredicted RBP7.21□□□□□ -1.26
HMGB3P24-201ENST00000433260 EPS15P42566 896 aa7.21□□□□□ -1.26
HMGB3P24-201ENST00000433260 GMPSP49915 693 aaPredicted RBP7.21□□□□□ -1.26
HMGB3P24-201ENST00000433260 MAP3K9P80192 1104 aa7.21□□□□□ -1.26
HMGB3P24-201ENST00000433260 RABL6Q3YEC7 729 aaPredicted RBP7.21□□□□□ -1.26
HMGB3P24-201ENST00000433260 TMEM92Q6UXU6 159 aa7.21□□□□□ -1.26
HMGB3P24-201ENST00000433260 ITPRIPQ8IWB1 547 aa7.21□□□□□ -1.26
HMGB3P24-201ENST00000433260 SIL1Q9H173 461 aa7.21□□□□□ -1.26
HMGB3P24-201ENST00000433260 C1orf115Q9H7X2 142 aa7.21□□□□□ -1.26
HMGB3P24-201ENST00000433260 HACL1Q9UJ83 578 aa7.21□□□□□ -1.26
HMGB3P24-201ENST00000433260 LEMD3Q9Y2U8 911 aa7.21□□□□□ -1.26
HMGB3P24-201ENST00000433260 LTBP1Q14766 1721 aa7.21□□□□□ -1.26
HMGB3P24-201ENST00000433260 WDR90Q96KV7 1748 aa7.21□□□□□ -1.26
HMGB3P24-201ENST00000433260 SCN4AP35499 1836 aa7.2□□□□□ -1.26
HMGB3P24-201ENST00000433260 SHTN1A0MZ66 631 aa7.2□□□□□ -1.26
HMGB3P24-201ENST00000433260 IQCA1LA6NCM1 817 aa7.2□□□□□ -1.26
HMGB3P24-201ENST00000433260 SPDYE16A6NNV3 312 aaPredicted RBP7.2□□□□□ -1.26
HMGB3P24-201ENST00000433260 PSMD14O00487 310 aa7.2□□□□□ -1.26
HMGB3P24-201ENST00000433260 EPHX2P34913 555 aa7.2□□□□□ -1.26
HMGB3P24-201ENST00000433260 RFX5P48382 616 aaPredicted RBP7.2□□□□□ -1.26
HMGB3P24-201ENST00000433260 METTL24Q5JXM2 366 aa7.2□□□□□ -1.26
HMGB3P24-201ENST00000433260 MXD3Q9BW11 206 aa7.2□□□□□ -1.26
HMGB3P24-201ENST00000433260 TAF1DQ9H5J8 278 aaPredicted RBP7.2□□□□□ -1.26
HMGB3P24-201ENST00000433260 CNOT7Q9UIV1 285 aaKnown RBP7.2□□□□□ -1.26
HMGB3P24-201ENST00000433260 PA2G4Q9UQ80 394 aaKnown RBP7.2□□□□□ -1.26
HMGB3P24-201ENST00000433260 HDAC5Q9UQL6 1122 aa7.2□□□□□ -1.26
HMGB3P24-201ENST00000433260 RIPOR2Q9Y4F9 1068 aa7.2□□□□□ -1.26
HMGB3P24-201ENST00000433260 A0A1B0GUL6 1792 aa7.19□□□□□ -1.26
HMGB3P24-201ENST00000433260 EYA2O00167 538 aa7.19□□□□□ -1.26
HMGB3P24-201ENST00000433260 ZBTB7BO15156 539 aaPredicted RBP7.19□□□□□ -1.26
HMGB3P24-201ENST00000433260 SRGAP3O43295 1099 aa7.19□□□□□ -1.26
HMGB3P24-201ENST00000433260 GNAI2P04899 355 aa7.19□□□□□ -1.26
HMGB3P24-201ENST00000433260 GYG1P46976 350 aa7.19□□□□□ -1.26
HMGB3P24-201ENST00000433260 SCNN1DP51172 638 aa7.19□□□□□ -1.26
HMGB3P24-201ENST00000433260 GTF2IP78347 998 aa7.19□□□□□ -1.26
HMGB3P24-201ENST00000433260 PTPN12Q05209 780 aaKnown RBP7.19□□□□□ -1.26
HMGB3P24-201ENST00000433260 MAP1SQ66K74 1059 aaPredicted RBP7.19□□□□□ -1.26
HMGB3P24-201ENST00000433260 SAMD7Q7Z3H4 446 aa7.19□□□□□ -1.26
HMGB3P24-201ENST00000433260 PODNQ7Z5L7 613 aa7.19□□□□□ -1.26
HMGB3P24-201ENST00000433260 SMC1BQ8NDV3 1235 aa7.19□□□□□ -1.26
HMGB3P24-201ENST00000433260 RBM46Q8TBY0 533 aaKnown RBP7.19□□□□□ -1.26
HMGB3P24-201ENST00000433260 GPRC5DQ9NZD1 345 aa7.19□□□□□ -1.26
HMGB3P24-201ENST00000433260 IQSEC3Q9UPP2 1182 aaPredicted RBP7.19□□□□□ -1.26
HMGB3P24-201ENST00000433260 JAG2Q9Y219 1238 aa7.19□□□□□ -1.26
HMGB3P24-201ENST00000433260 COG6Q9Y2V7 657 aa7.19□□□□□ -1.26
HMGB3P24-201ENST00000433260 SCN9AQ15858 1988 aa7.19□□□□□ -1.26
HMGB3P24-201ENST00000433260 PNMA6EA0A0J9YXQ4 647 aa7.18□□□□□ -1.26
HMGB3P24-201ENST00000433260 USP17L3A6NCW0 530 aa7.18□□□□□ -1.26
HMGB3P24-201ENST00000433260 USP17L4A6NCW7 530 aa7.18□□□□□ -1.26
HMGB3P24-201ENST00000433260 H7C1D1 291 aa7.18□□□□□ -1.26
HMGB3P24-201ENST00000433260 DPYSL4O14531 572 aa7.18□□□□□ -1.26
HMGB3P24-201ENST00000433260 PDE8BO95263 885 aa7.18□□□□□ -1.26
HMGB3P24-201ENST00000433260 HTRA3P83110 453 aa7.18□□□□□ -1.26
HMGB3P24-201ENST00000433260 ATP8B2P98198 1209 aa7.18□□□□□ -1.26
HMGB3P24-201ENST00000433260 TBC1D10BQ4KMP7 808 aaPredicted RBP7.18□□□□□ -1.26
HMGB3P24-201ENST00000433260 C20orf194Q5TEA3 1177 aa7.18□□□□□ -1.26
HMGB3P24-201ENST00000433260 TTLL5Q6EMB2 1281 aa7.18□□□□□ -1.26
HMGB3P24-201ENST00000433260 USP17L1Q7RTZ2 530 aa7.18□□□□□ -1.26
HMGB3P24-201ENST00000433260 PNMA8AQ86V59 439 aaPredicted RBP7.18□□□□□ -1.26
HMGB3P24-201ENST00000433260 COA1Q9GZY4 146 aa7.18□□□□□ -1.26
HMGB3P24-201ENST00000433260 BCL11AQ9H165 835 aa7.18□□□□□ -1.26
HMGB3P24-201ENST00000433260 CD209Q9NNX6 404 aa7.18□□□□□ -1.26
HMGB3P24-201ENST00000433260 EMILIN3Q9NT22 766 aa7.18□□□□□ -1.26
HMGB3P24-201ENST00000433260 MROH5Q6ZUA9 1318 aa7.18□□□□□ -1.26
HMGB3P24-201ENST00000433260 MED23Q9ULK4 1368 aa7.18□□□□□ -1.26
HMGB3P24-201ENST00000433260 POLR2AP24928 1970 aaKnown RBP7.17□□□□□ -1.26
HMGB3P24-201ENST00000433260 F8W031 263 aaPredicted RBP7.17□□□□□ -1.26
HMGB3P24-201ENST00000433260 VIL1P09327 827 aaKnown RBP7.17□□□□□ -1.26
HMGB3P24-201ENST00000433260 MS4A1P11836 297 aa7.17□□□□□ -1.26
HMGB3P24-201ENST00000433260 HIBADHP31937 336 aaKnown RBP7.17□□□□□ -1.26
HMGB3P24-201ENST00000433260 BCAMP50895 628 aa7.17□□□□□ -1.26
HMGB3P24-201ENST00000433260 HIRAP54198 1017 aaPredicted RBP7.17□□□□□ -1.26
HMGB3P24-201ENST00000433260 TIMM10P62072 90 aa7.17□□□□□ -1.26
HMGB3P24-201ENST00000433260 FMR1Q06787 632 aaKnown RBP eCLIP7.17□□□□□ -1.26
HMGB3P24-201ENST00000433260 UBE4AQ14139 1066 aa7.17□□□□□ -1.26
HMGB3P24-201ENST00000433260 RSBN1LQ6PCB5 846 aaPredicted RBP7.17□□□□□ -1.26
HMGB3P24-201ENST00000433260 USP50Q70EL3 339 aaPredicted RBP7.17□□□□□ -1.26
HMGB3P24-201ENST00000433260 ATG9AQ7Z3C6 839 aa7.17□□□□□ -1.26
HMGB3P24-201ENST00000433260 ZNF804AQ7Z570 1209 aa7.17□□□□□ -1.26
HMGB3P24-201ENST00000433260 VPS37DQ86XT2 251 aa7.17□□□□□ -1.26
HMGB3P24-201ENST00000433260 CNTROBQ8N137 903 aa7.17□□□□□ -1.26
HMGB3P24-201ENST00000433260 FAM84BQ96KN1 310 aaPredicted RBP7.17□□□□□ -1.26
HMGB3P24-201ENST00000433260 ADARB2Q9NS39 739 aaKnown RBP7.17□□□□□ -1.26
HMGB3P24-201ENST00000433260 CEP126Q9P2H0 1117 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms