RNA–Protein interactions for RNA: ENST00000430669.6

PTCH1-208, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-208ENST00000430669 TANGO6Q9C0B7 1094 aa13.27□□□□□ -0.28
PTCH1-208ENST00000430669 ERBB3P21860 1342 aa13.27□□□□□ -0.29
PTCH1-208ENST00000430669 WDR17Q8IZU2 1322 aa13.27□□□□□ -0.29
PTCH1-208ENST00000430669 CTSWP56202 376 aa13.27□□□□□ -0.29
PTCH1-208ENST00000430669 LDHBP07195 334 aaKnown RBP13.27□□□□□ -0.29
PTCH1-208ENST00000430669 TRIM21P19474 475 aaKnown RBP13.27□□□□□ -0.29
PTCH1-208ENST00000430669 SYKP43405 635 aa13.27□□□□□ -0.29
PTCH1-208ENST00000430669 JARID2Q92833 1246 aaPredicted RBP13.27□□□□□ -0.29
PTCH1-208ENST00000430669 STXBP4Q6ZWJ1 553 aa13.27□□□□□ -0.29
PTCH1-208ENST00000430669 CCDC150Q8NCX0 1101 aa13.27□□□□□ -0.29
PTCH1-208ENST00000430669 SETQ01105 290 aaPredicted RBP13.26□□□□□ -0.29
PTCH1-208ENST00000430669 DSCC1Q9BVC3 393 aa13.26□□□□□ -0.29
PTCH1-208ENST00000430669 USP44Q9H0E7 712 aa13.26□□□□□ -0.29
PTCH1-208ENST00000430669 CLIP2Q9UDT6 1046 aa13.26□□□□□ -0.29
PTCH1-208ENST00000430669 HDAC9Q9UKV0 1011 aa13.26□□□□□ -0.29
PTCH1-208ENST00000430669 MCM3P25205 808 aa13.26□□□□□ -0.29
PTCH1-208ENST00000430669 MAST3O60307 1309 aa13.26□□□□□ -0.29
PTCH1-208ENST00000430669 CIAO1O76071 339 aa13.26□□□□□ -0.29
PTCH1-208ENST00000430669 USP48Q86UV5 1035 aa13.26□□□□□ -0.29
PTCH1-208ENST00000430669 SLC27A2O14975 620 aa13.26□□□□□ -0.29
PTCH1-208ENST00000430669 TOP1P11387 765 aaKnown RBP13.26□□□□□ -0.29
PTCH1-208ENST00000430669 BEND3Q5T5X7 828 aa13.26□□□□□ -0.29
PTCH1-208ENST00000430669 SUCLG2Q96I99 432 aa13.26□□□□□ -0.29
PTCH1-208ENST00000430669 ZNF496Q96IT1 587 aaPredicted RBP13.26□□□□□ -0.29
PTCH1-208ENST00000430669 OSBPL3Q9H4L5 887 aa13.26□□□□□ -0.29
PTCH1-208ENST00000430669 EIF5P55010 431 aaKnown RBP13.26□□□□□ -0.29
PTCH1-208ENST00000430669 TMEM132AQ24JP5 1023 aa13.26□□□□□ -0.29
PTCH1-208ENST00000430669 HS1BP3Q53T59 392 aa13.26□□□□□ -0.29
PTCH1-208ENST00000430669 CNBD1Q8NA66 436 aa13.26□□□□□ -0.29
PTCH1-208ENST00000430669 WDR66Q8TBY9 1149 aa13.26□□□□□ -0.29
PTCH1-208ENST00000430669 ARID3AQ99856 593 aa13.26□□□□□ -0.29
PTCH1-208ENST00000430669 GUCY1B3Q02153 619 aa13.26□□□□□ -0.29
PTCH1-208ENST00000430669 MPHOSPH6Q99547 160 aaKnown RBP13.26□□□□□ -0.29
PTCH1-208ENST00000430669 ZHX3Q9H4I2 956 aa13.25□□□□□ -0.29
PTCH1-208ENST00000430669 KRT2P35908 639 aa13.25□□□□□ -0.29
PTCH1-208ENST00000430669 STAP2Q9UGK3 403 aa13.25□□□□□ -0.29
PTCH1-208ENST00000430669 SHPRHQ149N8 1683 aa13.25□□□□□ -0.29
PTCH1-208ENST00000430669 ERLIN1O75477 346 aa13.25□□□□□ -0.29
PTCH1-208ENST00000430669 VPS36Q86VN1 386 aa13.25□□□□□ -0.29
PTCH1-208ENST00000430669 XAGE2Q96GT9 111 aa13.25□□□□□ -0.29
PTCH1-208ENST00000430669 PTPRUQ92729 1446 aa13.25□□□□□ -0.29
PTCH1-208ENST00000430669 ADGRB2O60241 1585 aa13.25□□□□□ -0.29
PTCH1-208ENST00000430669 GNPATO15228 680 aa13.25□□□□□ -0.29
PTCH1-208ENST00000430669 HSPA4P34932 840 aa13.25□□□□□ -0.29
PTCH1-208ENST00000430669 PARP3Q9Y6F1 533 aa13.25□□□□□ -0.29
PTCH1-208ENST00000430669 TCIRG1Q13488 830 aa13.25□□□□□ -0.29
PTCH1-208ENST00000430669 ATG3Q9NT62 314 aa13.25□□□□□ -0.29
PTCH1-208ENST00000430669 MRPS27Q92552 414 aaKnown RBP13.24□□□□□ -0.29
PTCH1-208ENST00000430669 KIF18AQ8NI77 898 aa13.24□□□□□ -0.29
PTCH1-208ENST00000430669 ERMNQ8TAM6 284 aa13.24□□□□□ -0.29
PTCH1-208ENST00000430669 OVOS2A0A0J9YW53 1432 aa13.24□□□□□ -0.29
PTCH1-208ENST00000430669 OVOS2Q6IE36 1432 aa13.24□□□□□ -0.29
PTCH1-208ENST00000430669 ZNF165P49910 485 aa13.24□□□□□ -0.29
PTCH1-208ENST00000430669 PPP4R3AQ6IN85 833 aa13.24□□□□□ -0.29
PTCH1-208ENST00000430669 KIAA1328Q86T90 577 aa13.24□□□□□ -0.29
PTCH1-208ENST00000430669 FAM89AQ96GI7 184 aa13.24□□□□□ -0.29
PTCH1-208ENST00000430669 DESP17661 470 aa13.24□□□□□ -0.29
PTCH1-208ENST00000430669 UBA7P41226 1012 aa13.24□□□□□ -0.29
PTCH1-208ENST00000430669 OGFOD1Q8N543 542 aa13.24□□□□□ -0.29
PTCH1-208ENST00000430669 BCL11BQ9C0K0 894 aaPredicted RBP13.24□□□□□ -0.29
PTCH1-208ENST00000430669 CCNL1Q9UK58 526 aaPredicted RBP13.24□□□□□ -0.29
PTCH1-208ENST00000430669 CNPY2Q9Y2B0 182 aa13.24□□□□□ -0.29
PTCH1-208ENST00000430669 GNA11P29992 359 aa13.23□□□□□ -0.29
PTCH1-208ENST00000430669 CCDC144CPQ8IYA2 1237 aa13.23□□□□□ -0.29
PTCH1-208ENST00000430669 PDCL2Q8N4E4 241 aa13.23□□□□□ -0.29
PTCH1-208ENST00000430669 PIBF1Q8WXW3 757 aa13.23□□□□□ -0.29
PTCH1-208ENST00000430669 ANGEL1Q9UNK9 670 aaKnown RBP13.23□□□□□ -0.29
PTCH1-208ENST00000430669 OVOS2A0A0G2JMS6 1433 aa13.23□□□□□ -0.29
PTCH1-208ENST00000430669 EIF3JO75822 258 aaKnown RBP13.23□□□□□ -0.29
PTCH1-208ENST00000430669 HAUS7Q99871 368 aa13.23□□□□□ -0.29
PTCH1-208ENST00000430669 MAP3K15Q6ZN16 1313 aa13.23□□□□□ -0.29
PTCH1-208ENST00000430669 PTPN14Q15678 1187 aa13.23□□□□□ -0.29
PTCH1-208ENST00000430669 CCDC181Q5TID7 509 aa13.23□□□□□ -0.29
PTCH1-208ENST00000430669 GPR108Q9NPR9 543 aa13.23□□□□□ -0.29
PTCH1-208ENST00000430669 ADCY5O95622 1261 aa13.23□□□□□ -0.29
PTCH1-208ENST00000430669 ZNF622Q969S3 477 aaKnown RBP eCLIP13.23□□□□□ -0.29
PTCH1-208ENST00000430669 ZC3H12CQ9C0D7 883 aaKnown RBP13.23□□□□□ -0.29
PTCH1-208ENST00000430669 SSBP05455 408 aaKnown RBP eCLIP13.23□□□□□ -0.29
PTCH1-208ENST00000430669 NOM1Q5C9Z4 860 aaKnown RBP13.23□□□□□ -0.29
PTCH1-208ENST00000430669 LZTS2Q9BRK4 669 aa13.23□□□□□ -0.29
PTCH1-208ENST00000430669 GLT8D2Q9H1C3 349 aa13.23□□□□□ -0.29
PTCH1-208ENST00000430669 STX8Q9UNK0 236 aa13.23□□□□□ -0.29
PTCH1-208ENST00000430669 KIF5CO60282 957 aa13.22□□□□□ -0.29
PTCH1-208ENST00000430669 SEC24BO95487 1268 aa13.22□□□□□ -0.29
PTCH1-208ENST00000430669 NECAB1Q8N987 351 aa13.22□□□□□ -0.29
PTCH1-208ENST00000430669 FAM200AQ8TCP9 573 aa13.22□□□□□ -0.29
PTCH1-208ENST00000430669 PCP11498 1178 aaKnown RBP13.22□□□□□ -0.29
PTCH1-208ENST00000430669 RRP36Q96EU6 259 aaKnown RBP13.22□□□□□ -0.29
PTCH1-208ENST00000430669 HEG1Q9ULI3 1381 aa13.22□□□□□ -0.29
PTCH1-208ENST00000430669 POTEJP0CG39 1038 aa13.22□□□□□ -0.29
PTCH1-208ENST00000430669 ARHGAP29Q52LW3 1261 aa13.22□□□□□ -0.29
PTCH1-208ENST00000430669 SPA17Q15506 151 aa13.22□□□□□ -0.29
PTCH1-208ENST00000430669 CWC15Q9P013 229 aaKnown RBP13.22□□□□□ -0.29
PTCH1-208ENST00000430669 NAP1L4Q99733 375 aaKnown RBP13.22□□□□□ -0.29
PTCH1-208ENST00000430669 TUBB4AP04350 444 aa13.22□□□□□ -0.29
PTCH1-208ENST00000430669 TCHHQ07283 1943 aa13.22□□□□□ -0.29
PTCH1-208ENST00000430669 PCCAP05165 728 aaPredicted RBP13.22□□□□□ -0.29
PTCH1-208ENST00000430669 ZNF771Q7L3S4 317 aaPredicted RBP13.22□□□□□ -0.29
PTCH1-208ENST00000430669 RGS12O14924 1447 aa13.21□□□□□ -0.29
PTCH1-208ENST00000430669 CKAP2LQ8IYA6 745 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms