RNA–Protein interactions for RNA: ENST00000430085.5

CALD1-207, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-207ENST00000430085 ANKRD2Q9GZV1 360 aa17.06■□□□□ 0.32
CALD1-207ENST00000430085 GNL3LQ9NVN8 582 aaKnown RBP17.06■□□□□ 0.32
CALD1-207ENST00000430085 UBE3CQ15386 1083 aa17.06■□□□□ 0.32
CALD1-207ENST00000430085 PRR5LQ6MZQ0 368 aa17.06■□□□□ 0.32
CALD1-207ENST00000430085 ZBTB7AO95365 584 aa17.05■□□□□ 0.32
CALD1-207ENST00000430085 SERPINB2P05120 415 aa17.05■□□□□ 0.32
CALD1-207ENST00000430085 CYP21A2P08686 494 aa17.05■□□□□ 0.32
CALD1-207ENST00000430085 TM4SF1P30408 202 aa17.05■□□□□ 0.32
CALD1-207ENST00000430085 MAP3K12Q12852 859 aa17.05■□□□□ 0.32
CALD1-207ENST00000430085 VPS37DQ86XT2 251 aa17.05■□□□□ 0.32
CALD1-207ENST00000430085 TNPO1Q92973 898 aaKnown RBP17.05■□□□□ 0.32
CALD1-207ENST00000430085 PUS7LQ9H0K6 701 aaKnown RBP17.05■□□□□ 0.32
CALD1-207ENST00000430085 PDE6AP16499 860 aa17.04■□□□□ 0.32
CALD1-207ENST00000430085 RPS6KB1P23443 525 aa17.04■□□□□ 0.32
CALD1-207ENST00000430085 MSL1Q68DK7 614 aa17.04■□□□□ 0.32
CALD1-207ENST00000430085 CTNNA3Q9UI47 895 aa17.04■□□□□ 0.32
CALD1-207ENST00000430085 TAF6LQ9Y6J9 622 aa17.04■□□□□ 0.32
CALD1-207ENST00000430085 GPAA1O43292 621 aa17.04■□□□□ 0.32
CALD1-207ENST00000430085 GYG1P46976 350 aa17.04■□□□□ 0.32
CALD1-207ENST00000430085 ANKRD1Q15327 319 aa17.04■□□□□ 0.32
CALD1-207ENST00000430085 RPGRQ92834 1020 aaKnown RBP17.04■□□□□ 0.32
CALD1-207ENST00000430085 ZSCAN31Q96LW9 406 aaPredicted RBP17.04■□□□□ 0.32
CALD1-207ENST00000430085 GBP4Q96PP9 640 aa17.04■□□□□ 0.32
CALD1-207ENST00000430085 NEK1Q96PY6 1258 aa17.04■□□□□ 0.32
CALD1-207ENST00000430085 ZNF804BA4D1E1 1349 aa17.03■□□□□ 0.32
CALD1-207ENST00000430085 ZNF532Q9HCE3 1301 aa17.03■□□□□ 0.32
CALD1-207ENST00000430085 MCM4P33991 863 aa17.03■□□□□ 0.32
CALD1-207ENST00000430085 GRAPQ13588 217 aa17.03■□□□□ 0.32
CALD1-207ENST00000430085 GRAPLQ8TC17 118 aaPredicted RBP17.03■□□□□ 0.32
CALD1-207ENST00000430085 LARP6Q9BRS8 491 aaKnown RBP17.03■□□□□ 0.32
CALD1-207ENST00000430085 WWC3Q9ULE0 1092 aa17.03■□□□□ 0.32
CALD1-207ENST00000430085 SH2B1Q9NRF2 756 aaPredicted RBP17.02■□□□□ 0.32
CALD1-207ENST00000430085 HMGB1P09429 215 aaKnown RBP17.02■□□□□ 0.31
CALD1-207ENST00000430085 MAGEB6Q8N7X4 407 aa17.02■□□□□ 0.31
CALD1-207ENST00000430085 SLC16A10Q8TF71 515 aa17.02■□□□□ 0.31
CALD1-207ENST00000430085 ALDH8A1Q9H2A2 487 aaPredicted RBP17.02■□□□□ 0.31
CALD1-207ENST00000430085 ATF5Q9Y2D1 282 aaPredicted RBP17.02■□□□□ 0.31
CALD1-207ENST00000430085 DOCK2Q92608 1830 aa17.01■□□□□ 0.31
CALD1-207ENST00000430085 MYO5AQ9Y4I1 1855 aaKnown RBP17.01■□□□□ 0.31
CALD1-207ENST00000430085 IMMTQ16891 758 aaKnown RBP17.01■□□□□ 0.31
CALD1-207ENST00000430085 LRP2BPQ9P2M1 347 aa17.01■□□□□ 0.31
CALD1-207ENST00000430085 IQSEC3Q9UPP2 1182 aaPredicted RBP17.01■□□□□ 0.31
CALD1-207ENST00000430085 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.01■□□□□ 0.31
CALD1-207ENST00000430085 TCRBV5S4A2TA0A5A2 114 aa17■□□□□ 0.31
CALD1-207ENST00000430085 WTIPA6NIX2 430 aaPredicted RBP17■□□□□ 0.31
CALD1-207ENST00000430085 POLRMTO00411 1230 aaKnown RBP17■□□□□ 0.31
CALD1-207ENST00000430085 DDR1Q08345 913 aa17■□□□□ 0.31
CALD1-207ENST00000430085 AIDAQ96BJ3 306 aa17■□□□□ 0.31
CALD1-207ENST00000430085 TCEANC2Q96MN5 208 aa17■□□□□ 0.31
CALD1-207ENST00000430085 MTFR1LQ9H019 292 aa17■□□□□ 0.31
CALD1-207ENST00000430085 DENND2AQ9ULE3 1009 aa17■□□□□ 0.31
CALD1-207ENST00000430085 DDX11L8A8MPP1 907 aa17■□□□□ 0.31
CALD1-207ENST00000430085 RBM17Q96I25 401 aaKnown RBP17■□□□□ 0.31
CALD1-207ENST00000430085 FAM84BQ96KN1 310 aaPredicted RBP17■□□□□ 0.31
CALD1-207ENST00000430085 ANKIB1Q9P2G1 1089 aa17■□□□□ 0.31
CALD1-207ENST00000430085 SRCAPQ6ZRS2 3230 aa16.99■□□□□ 0.31
CALD1-207ENST00000430085 CRY2Q49AN0 593 aa16.99■□□□□ 0.31
CALD1-207ENST00000430085 NLGN1Q8N2Q7 840 aa16.99■□□□□ 0.31
CALD1-207ENST00000430085 E7EWF7 191 aa16.98■□□□□ 0.31
CALD1-207ENST00000430085 SEMA3EO15041 775 aa16.98■□□□□ 0.31
CALD1-207ENST00000430085 FOXP2O15409 715 aa16.98■□□□□ 0.31
CALD1-207ENST00000430085 FGAP02671 866 aa16.98■□□□□ 0.31
CALD1-207ENST00000430085 FGD1P98174 961 aa16.98■□□□□ 0.31
CALD1-207ENST00000430085 PKP1Q13835 747 aa16.98■□□□□ 0.31
CALD1-207ENST00000430085 TTLL5Q6EMB2 1281 aa16.98■□□□□ 0.31
CALD1-207ENST00000430085 STOX1Q6ZVD7 989 aa16.98■□□□□ 0.31
CALD1-207ENST00000430085 FBXO33Q7Z6M2 555 aa16.98■□□□□ 0.31
CALD1-207ENST00000430085 TPCN1Q9ULQ1 816 aa16.98■□□□□ 0.31
CALD1-207ENST00000430085 LARGE1O95461 756 aa16.98■□□□□ 0.31
CALD1-207ENST00000430085 APPP05067 770 aa16.98■□□□□ 0.31
CALD1-207ENST00000430085 HIBADHP31937 336 aaKnown RBP16.98■□□□□ 0.31
CALD1-207ENST00000430085 COL9A3Q14050 684 aaPredicted RBP16.98■□□□□ 0.31
CALD1-207ENST00000430085 ME3Q16798 604 aa16.98■□□□□ 0.31
CALD1-207ENST00000430085 CCDC83Q8IWF9 413 aa16.98■□□□□ 0.31
CALD1-207ENST00000430085 ABCF2Q9UG63 623 aa16.98■□□□□ 0.31
CALD1-207ENST00000430085 KLRK1P26718 216 aa16.97■□□□□ 0.31
CALD1-207ENST00000430085 TOB2Q14106 344 aaPredicted RBP16.97■□□□□ 0.31
CALD1-207ENST00000430085 DHX32Q7L7V1 743 aaKnown RBP16.97■□□□□ 0.31
CALD1-207ENST00000430085 SMC3Q9UQE7 1217 aa16.97■□□□□ 0.31
CALD1-207ENST00000430085 A0A0G2JLW4 131 aa16.96■□□□□ 0.31
CALD1-207ENST00000430085 ZNF213O14771 459 aa16.96■□□□□ 0.31
CALD1-207ENST00000430085 MMP10P09238 476 aa16.96■□□□□ 0.31
CALD1-207ENST00000430085 HAND2P61296 217 aa16.96■□□□□ 0.31
CALD1-207ENST00000430085 Q6ZUG5 572 aa16.96■□□□□ 0.31
CALD1-207ENST00000430085 STRBPQ96SI9 672 aaKnown RBP16.96■□□□□ 0.31
CALD1-207ENST00000430085 RAI14Q9P0K7 980 aa16.96■□□□□ 0.31
CALD1-207ENST00000430085 LEMD3Q9Y2U8 911 aa16.96■□□□□ 0.31
CALD1-207ENST00000430085 XDHP47989 1333 aa16.96■□□□□ 0.31
CALD1-207ENST00000430085 GOLGA6L22H0YM25 854 aa16.96■□□□□ 0.3
CALD1-207ENST00000430085 MBD4O95243 580 aa16.96■□□□□ 0.3
CALD1-207ENST00000430085 CLEC17AQ6ZS10 378 aa16.96■□□□□ 0.3
CALD1-207ENST00000430085 COL1A1P02452 1464 aaPredicted RBP16.95■□□□□ 0.3
CALD1-207ENST00000430085 LAMA4Q16363 1823 aa16.95■□□□□ 0.3
CALD1-207ENST00000430085 PTMSP20962 102 aa16.95■□□□□ 0.3
CALD1-207ENST00000430085 PTGER2P43116 358 aa16.95■□□□□ 0.3
CALD1-207ENST00000430085 PDS5AQ29RF7 1337 aaKnown RBP16.95■□□□□ 0.3
CALD1-207ENST00000430085 BBOX1O75936 387 aa16.94■□□□□ 0.3
CALD1-207ENST00000430085 CYP7A1P22680 504 aa16.94■□□□□ 0.3
CALD1-207ENST00000430085 NECAB1Q8N987 351 aa16.94■□□□□ 0.3
CALD1-207ENST00000430085 SGIP1Q9BQI5 828 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms