RNA–Protein interactions for RNA: ENST00000426778.5

ERCC3-202, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,916 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-202ENST00000426778 ZSCAN20P17040 1043 aaPredicted RBP16.78■□□□□ 0.28
ERCC3-202ENST00000426778 CEP135Q66GS9 1140 aa16.78■□□□□ 0.28
ERCC3-202ENST00000426778 CCDC112Q8NEF3 446 aa16.78■□□□□ 0.28
ERCC3-202ENST00000426778 XAGE2Q96GT9 111 aa16.78■□□□□ 0.28
ERCC3-202ENST00000426778 ZNF396Q96N95 335 aaPredicted RBP16.78■□□□□ 0.28
ERCC3-202ENST00000426778 CEP126Q9P2H0 1117 aa16.78■□□□□ 0.28
ERCC3-202ENST00000426778 SALL1Q9NSC2 1324 aa16.78■□□□□ 0.28
ERCC3-202ENST00000426778 ATF3P18847 181 aa16.78■□□□□ 0.28
ERCC3-202ENST00000426778 C8orf76Q96K31 380 aa16.78■□□□□ 0.28
ERCC3-202ENST00000426778 ORC3Q9UBD5 711 aaPredicted RBP16.78■□□□□ 0.28
ERCC3-202ENST00000426778 CTIFO43310 598 aaKnown RBP16.77■□□□□ 0.28
ERCC3-202ENST00000426778 GPTP24298 496 aa16.77■□□□□ 0.28
ERCC3-202ENST00000426778 HSP90AA4PQ58FG1 418 aa16.77■□□□□ 0.28
ERCC3-202ENST00000426778 ANKRD7Q92527 254 aa16.77■□□□□ 0.28
ERCC3-202ENST00000426778 MRPS27Q92552 414 aaKnown RBP16.77■□□□□ 0.28
ERCC3-202ENST00000426778 C19orf44Q9H6X5 657 aa16.77■□□□□ 0.28
ERCC3-202ENST00000426778 TOM1L2Q6ZVM7 507 aa16.77■□□□□ 0.27
ERCC3-202ENST00000426778 SENP2Q9HC62 589 aa16.77■□□□□ 0.27
ERCC3-202ENST00000426778 CPLX1O14810 134 aa16.76■□□□□ 0.27
ERCC3-202ENST00000426778 CCDC57Q2TAC2 916 aa16.76■□□□□ 0.27
ERCC3-202ENST00000426778 TAF7LQ5H9L4 462 aa16.76■□□□□ 0.27
ERCC3-202ENST00000426778 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.76■□□□□ 0.27
ERCC3-202ENST00000426778 SMAP1Q8IYB5 467 aaPredicted RBP16.76■□□□□ 0.27
ERCC3-202ENST00000426778 FMR1NBQ8N0W7 255 aaPredicted RBP16.76■□□□□ 0.27
ERCC3-202ENST00000426778 ANO10Q9NW15 660 aa16.76■□□□□ 0.27
ERCC3-202ENST00000426778 CEP57L1Q8IYX8 460 aa16.76■□□□□ 0.27
ERCC3-202ENST00000426778 MYL10Q9BUA6 226 aa16.76■□□□□ 0.27
ERCC3-202ENST00000426778 SMTNL1A8MU46 457 aa16.76■□□□□ 0.27
ERCC3-202ENST00000426778 ANTXR2P58335 489 aa16.76■□□□□ 0.27
ERCC3-202ENST00000426778 GOLGA8FQ08AF8 430 aa16.76■□□□□ 0.27
ERCC3-202ENST00000426778 GOLGA8DPQ0D2H9 430 aa16.76■□□□□ 0.27
ERCC3-202ENST00000426778 PHKBQ93100 1093 aa16.76■□□□□ 0.27
ERCC3-202ENST00000426778 AGXT2Q9BYV1 514 aa16.76■□□□□ 0.27
ERCC3-202ENST00000426778 IFNKQ9P0W0 207 aa16.76■□□□□ 0.27
ERCC3-202ENST00000426778 APPP05067 770 aa16.75■□□□□ 0.27
ERCC3-202ENST00000426778 CCZ1BP86790 482 aa16.75■□□□□ 0.27
ERCC3-202ENST00000426778 CCZ1P86791 482 aaPredicted RBP16.75■□□□□ 0.27
ERCC3-202ENST00000426778 LINC00301Q8NCQ3 95 aa16.75■□□□□ 0.27
ERCC3-202ENST00000426778 STRN4Q9NRL3 753 aa16.75■□□□□ 0.27
ERCC3-202ENST00000426778 ZNF215Q9UL58 517 aaPredicted RBP16.75■□□□□ 0.27
ERCC3-202ENST00000426778 HPS5Q9UPZ3 1129 aa16.75■□□□□ 0.27
ERCC3-202ENST00000426778 LMOD1P29536 600 aaPredicted RBP16.75■□□□□ 0.27
ERCC3-202ENST00000426778 ZRSR1Q15695 479 aaKnown RBP16.75■□□□□ 0.27
ERCC3-202ENST00000426778 TMC6Q7Z403 805 aa16.75■□□□□ 0.27
ERCC3-202ENST00000426778 NBPF11Q86T75 865 aa16.75■□□□□ 0.27
ERCC3-202ENST00000426778 XPO4Q9C0E2 1151 aaKnown RBP16.75■□□□□ 0.27
ERCC3-202ENST00000426778 TRPM3Q9HCF6 1732 aaPredicted RBP16.75■□□□□ 0.27
ERCC3-202ENST00000426778 PTPN14Q15678 1187 aa16.74■□□□□ 0.27
ERCC3-202ENST00000426778 IMMTQ16891 758 aaKnown RBP16.74■□□□□ 0.27
ERCC3-202ENST00000426778 CCDC158Q5M9N0 1113 aa16.74■□□□□ 0.27
ERCC3-202ENST00000426778 ZNF274Q96GC6 653 aaPredicted RBP16.74■□□□□ 0.27
ERCC3-202ENST00000426778 SNAP23O00161 211 aa16.74■□□□□ 0.27
ERCC3-202ENST00000426778 MRFAP1L1Q96HT8 127 aa16.74■□□□□ 0.27
ERCC3-202ENST00000426778 SPTLC2O15270 562 aa16.73■□□□□ 0.27
ERCC3-202ENST00000426778 CTAGE5O15320 804 aa16.73■□□□□ 0.27
ERCC3-202ENST00000426778 ATP1A3P13637 1013 aa16.73■□□□□ 0.27
ERCC3-202ENST00000426778 RALYLQ86SE5 291 aaKnown RBP16.73■□□□□ 0.27
ERCC3-202ENST00000426778 MROH7-TTC4A0A0A0MT08 1334 aa16.73■□□□□ 0.27
ERCC3-202ENST00000426778 GPAA1O43292 621 aa16.73■□□□□ 0.27
ERCC3-202ENST00000426778 SPECC1Q5M775 1068 aa16.73■□□□□ 0.27
ERCC3-202ENST00000426778 MYSM1Q5VVJ2 828 aa16.73■□□□□ 0.27
ERCC3-202ENST00000426778 ADAMTS7Q9UKP4 1686 aa16.73■□□□□ 0.27
ERCC3-202ENST00000426778 WDHD1O75717 1129 aaPredicted RBP16.73■□□□□ 0.27
ERCC3-202ENST00000426778 SARM1Q6SZW1 724 aa16.73■□□□□ 0.27
ERCC3-202ENST00000426778 MICU3Q86XE3 530 aa16.73■□□□□ 0.27
ERCC3-202ENST00000426778 HELBQ8NG08 1087 aaPredicted RBP16.73■□□□□ 0.27
ERCC3-202ENST00000426778 KIAA1468Q9P260 1216 aa16.73■□□□□ 0.27
ERCC3-202ENST00000426778 CAMTA1Q9Y6Y1 1673 aa16.72■□□□□ 0.27
ERCC3-202ENST00000426778 IDH1O75874 414 aaKnown RBP16.72■□□□□ 0.27
ERCC3-202ENST00000426778 ADALQ6DHV7 355 aa16.72■□□□□ 0.27
ERCC3-202ENST00000426778 SYNE3Q6ZMZ3 975 aa16.72■□□□□ 0.27
ERCC3-202ENST00000426778 CCDC82Q8N4S0 544 aa16.72■□□□□ 0.27
ERCC3-202ENST00000426778 LRRN4CLQ8ND94 238 aa16.72■□□□□ 0.27
ERCC3-202ENST00000426778 FBXO18Q8NFZ0 1043 aa16.72■□□□□ 0.27
ERCC3-202ENST00000426778 ZCRB1Q8TBF4 217 aaKnown RBP16.72■□□□□ 0.27
ERCC3-202ENST00000426778 CLIC6Q96NY7 704 aa16.72■□□□□ 0.27
ERCC3-202ENST00000426778 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.72■□□□□ 0.272e-6■■□□□ 14.2
ERCC3-202ENST00000426778 MYH15Q9Y2K3 1946 aa16.72■□□□□ 0.27
ERCC3-202ENST00000426778 RFX7Q2KHR2 1363 aa16.72■□□□□ 0.27
ERCC3-202ENST00000426778 ZNF202O95125 648 aa16.72■□□□□ 0.27
ERCC3-202ENST00000426778 RTEL1Q9NZ71 1219 aa16.72■□□□□ 0.27
ERCC3-202ENST00000426778 ZNF213O14771 459 aa16.71■□□□□ 0.27
ERCC3-202ENST00000426778 MB21D2Q8IYB1 491 aaPredicted RBP16.71■□□□□ 0.27
ERCC3-202ENST00000426778 PRDM11Q9NQV5 511 aa16.71■□□□□ 0.27
ERCC3-202ENST00000426778 NEDD4P46934 1319 aa16.71■□□□□ 0.27
ERCC3-202ENST00000426778 SLC3A2P08195 630 aaKnown RBP16.71■□□□□ 0.27
ERCC3-202ENST00000426778 PFKFB1P16118 471 aa16.71■□□□□ 0.27
ERCC3-202ENST00000426778 ELF2Q15723 593 aa16.71■□□□□ 0.27
ERCC3-202ENST00000426778 CCDC191Q8NCU4 936 aa16.71■□□□□ 0.27
ERCC3-202ENST00000426778 TMEM94Q12767 1356 aa16.71■□□□□ 0.26
ERCC3-202ENST00000426778 CDC25BP30305 580 aa16.7■□□□□ 0.26
ERCC3-202ENST00000426778 MCAMP43121 646 aa16.7■□□□□ 0.26
ERCC3-202ENST00000426778 ARMCX5Q6P1M9 558 aa16.7■□□□□ 0.26
ERCC3-202ENST00000426778 CYB5R4Q7L1T6 521 aa16.7■□□□□ 0.26
ERCC3-202ENST00000426778 CCAR2Q8N163 923 aaKnown RBP16.7■□□□□ 0.26
ERCC3-202ENST00000426778 B4E1Z4 1266 aa16.7■□□□□ 0.26
ERCC3-202ENST00000426778 METTL24Q5JXM2 366 aa16.7■□□□□ 0.26
ERCC3-202ENST00000426778 SLC9C2Q5TAH2 1124 aa16.7■□□□□ 0.26
ERCC3-202ENST00000426778 TBC1D10CQ8IV04 446 aa16.7■□□□□ 0.26
ERCC3-202ENST00000426778 NBPF3Q9H094 633 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms