RNA–Protein interactions for RNA: ENST00000423982.6

MSH5-206, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-206ENST00000423982 DDX41Q9UJV9 622 aaKnown RBP16.81■□□□□ 0.28
MSH5-206ENST00000423982 SKILP12757 684 aa16.8■□□□□ 0.28
MSH5-206ENST00000423982 CRKLP46109 303 aaKnown RBP16.8■□□□□ 0.28
MSH5-206ENST00000423982 GUCY1B3Q02153 619 aa16.8■□□□□ 0.28
MSH5-206ENST00000423982 SCRN1Q12765 414 aa16.8■□□□□ 0.28
MSH5-206ENST00000423982 KMT5BQ4FZB7 885 aa16.8■□□□□ 0.28
MSH5-206ENST00000423982 EPHA10Q5JZY3 1008 aa16.8■□□□□ 0.28
MSH5-206ENST00000423982 CCAR1Q8IX12 1150 aaKnown RBP16.8■□□□□ 0.28
MSH5-206ENST00000423982 PAXBP1Q9Y5B6 917 aa16.8■□□□□ 0.28
MSH5-206ENST00000423982 IGKV5-2P06315 115 aa16.79■□□□□ 0.28
MSH5-206ENST00000423982 ADD1P35611 737 aaKnown RBP16.79■□□□□ 0.28
MSH5-206ENST00000423982 KIF18AQ8NI77 898 aa16.79■□□□□ 0.28
MSH5-206ENST00000423982 SNRKQ9NRH2 765 aa16.79■□□□□ 0.28
MSH5-206ENST00000423982 CCDC69A6NI79 296 aa16.79■□□□□ 0.28
MSH5-206ENST00000423982 HIP1O00291 1037 aa16.79■□□□□ 0.28
MSH5-206ENST00000423982 ALDH1L1O75891 902 aa16.79■□□□□ 0.28
MSH5-206ENST00000423982 NEK1Q96PY6 1258 aa16.79■□□□□ 0.28
MSH5-206ENST00000423982 PODXL2Q9NZ53 605 aa16.79■□□□□ 0.28
MSH5-206ENST00000423982 A0A0G2JLW4 131 aa16.78■□□□□ 0.28
MSH5-206ENST00000423982 NEXNQ0ZGT2 675 aa16.78■□□□□ 0.28
MSH5-206ENST00000423982 TEX13AQ9BXU3 409 aaPredicted RBP16.78■□□□□ 0.28
MSH5-206ENST00000423982 ST7Q9NRC1 585 aa16.78■□□□□ 0.28
MSH5-206ENST00000423982 CGNQ9P2M7 1197 aaKnown RBP16.78■□□□□ 0.28
MSH5-206ENST00000423982 CYP21A2P08686 494 aa16.78■□□□□ 0.28
MSH5-206ENST00000423982 CCZ1BP86790 482 aa16.78■□□□□ 0.28
MSH5-206ENST00000423982 CCZ1P86791 482 aaPredicted RBP16.78■□□□□ 0.28
MSH5-206ENST00000423982 ELF2Q15723 593 aa16.78■□□□□ 0.28
MSH5-206ENST00000423982 DHX40Q8IX18 779 aaKnown RBP16.78■□□□□ 0.28
MSH5-206ENST00000423982 LINC00116Q8NCU8 138 aa16.78■□□□□ 0.28
MSH5-206ENST00000423982 BRWD3Q6RI45 1802 aa16.78■□□□□ 0.28
MSH5-206ENST00000423982 LAMB4A4D0S4 1761 aa16.77■□□□□ 0.28
MSH5-206ENST00000423982 GPTP24298 496 aa16.77■□□□□ 0.28
MSH5-206ENST00000423982 CCT2P78371 535 aaKnown RBP16.77■□□□□ 0.28
MSH5-206ENST00000423982 PTPN14Q15678 1187 aa16.77■□□□□ 0.28
MSH5-206ENST00000423982 STOX1Q6ZVD7 989 aa16.77■□□□□ 0.28
MSH5-206ENST00000423982 SMARCC1Q92922 1105 aaPredicted RBP16.77■□□□□ 0.28
MSH5-206ENST00000423982 USP28Q96RU2 1077 aa16.77■□□□□ 0.28
MSH5-206ENST00000423982 DNAJC2Q99543 621 aaKnown RBP16.77■□□□□ 0.28
MSH5-206ENST00000423982 CCNL1Q9UK58 526 aaPredicted RBP16.77■□□□□ 0.28
MSH5-206ENST00000423982 SNW1Q13573 536 aaKnown RBP16.77■□□□□ 0.28
MSH5-206ENST00000423982 SYCP1Q15431 976 aa16.77■□□□□ 0.28
MSH5-206ENST00000423982 NYAP1Q6ZVC0 841 aa16.77■□□□□ 0.28
MSH5-206ENST00000423982 NCOA5Q9HCD5 579 aaKnown RBP16.77■□□□□ 0.28
MSH5-206ENST00000423982 SRCAPQ6ZRS2 3230 aa16.77■□□□□ 0.27
MSH5-206ENST00000423982 BECN2A8MW95 431 aa16.76■□□□□ 0.27
MSH5-206ENST00000423982 SLFN14P0C7P3 912 aa16.76■□□□□ 0.27
MSH5-206ENST00000423982 PLBD2Q8NHP8 589 aa16.76■□□□□ 0.27
MSH5-206ENST00000423982 METTL22Q9BUU2 404 aaPredicted RBP16.76■□□□□ 0.27
MSH5-206ENST00000423982 DBNLQ9UJU6 430 aaKnown RBP16.76■□□□□ 0.27
MSH5-206ENST00000423982 FGD1P98174 961 aa16.76■□□□□ 0.27
MSH5-206ENST00000423982 HLFQ16534 295 aa16.76■□□□□ 0.27
MSH5-206ENST00000423982 INTS5Q6P9B9 1019 aaKnown RBP16.76■□□□□ 0.27
MSH5-206ENST00000423982 FBXO38Q6PIJ6 1188 aa16.76■□□□□ 0.27
MSH5-206ENST00000423982 AOPEPQ8N6M6 819 aa16.76■□□□□ 0.27
MSH5-206ENST00000423982 LRRN4CLQ8ND94 238 aa16.76■□□□□ 0.27
MSH5-206ENST00000423982 LINS1Q8NG48 757 aa16.76■□□□□ 0.27
MSH5-206ENST00000423982 ALDH8A1Q9H2A2 487 aaPredicted RBP16.76■□□□□ 0.27
MSH5-206ENST00000423982 CCDC87Q9NVE4 849 aa16.76■□□□□ 0.27
MSH5-206ENST00000423982 NAP1L2Q9ULW6 460 aaPredicted RBP16.76■□□□□ 0.27
MSH5-206ENST00000423982 NEURL1BA8MQ27 555 aa16.76■□□□□ 0.27
MSH5-206ENST00000423982 CTDNEP1O95476 244 aa16.76■□□□□ 0.27
MSH5-206ENST00000423982 CDC25BP30305 580 aa16.76■□□□□ 0.27
MSH5-206ENST00000423982 STX1AQ16623 288 aa16.76■□□□□ 0.27
MSH5-206ENST00000423982 KIF6Q6ZMV9 814 aa16.76■□□□□ 0.27
MSH5-206ENST00000423982 FAM196AQ6ZSG2 479 aa16.76■□□□□ 0.27
MSH5-206ENST00000423982 APOBRQ0VD83 1088 aa16.75■□□□□ 0.27
MSH5-206ENST00000423982 SARM1Q6SZW1 724 aa16.75■□□□□ 0.27
MSH5-206ENST00000423982 DDX46Q7L014 1031 aaKnown RBP16.75■□□□□ 0.27
MSH5-206ENST00000423982 CHST3Q7LGC8 479 aa16.75■□□□□ 0.27
MSH5-206ENST00000423982 MRFAP1L1Q96HT8 127 aa16.75■□□□□ 0.27
MSH5-206ENST00000423982 HMG20BQ9P0W2 317 aa16.75■□□□□ 0.27
MSH5-206ENST00000423982 MORC2Q9Y6X9 1032 aaPredicted RBP16.75■□□□□ 0.27
MSH5-206ENST00000423982 ZNF609O15014 1411 aa16.75■□□□□ 0.27
MSH5-206ENST00000423982 BTAF1O14981 1849 aa16.75■□□□□ 0.27
MSH5-206ENST00000423982 TSGA10IPQ3SY00 556 aa16.75■□□□□ 0.27
MSH5-206ENST00000423982 UBE3BQ7Z3V4 1068 aa16.75■□□□□ 0.27
MSH5-206ENST00000423982 CFAP45Q9UL16 551 aa16.75■□□□□ 0.27
MSH5-206ENST00000423982 USPL1Q5W0Q7 1092 aa16.74■□□□□ 0.27
MSH5-206ENST00000423982 DZIP3Q86Y13 1208 aaKnown RBP16.74■□□□□ 0.27
MSH5-206ENST00000423982 NSUN7Q8NE18 718 aaKnown RBP16.74■□□□□ 0.27
MSH5-206ENST00000423982 PDIA4P13667 645 aaKnown RBP16.74■□□□□ 0.27
MSH5-206ENST00000423982 TFCP2Q12800 502 aa16.74■□□□□ 0.27
MSH5-206ENST00000423982 CCAR2Q8N163 923 aaKnown RBP16.74■□□□□ 0.27
MSH5-206ENST00000423982 ZBTB22O15209 634 aa16.73■□□□□ 0.27
MSH5-206ENST00000423982 NBPF11Q86T75 865 aa16.73■□□□□ 0.27
MSH5-206ENST00000423982 TJP1Q07157 1748 aa16.73■□□□□ 0.27
MSH5-206ENST00000423982 A0A087WZG4 1122 aa16.73■□□□□ 0.27
MSH5-206ENST00000423982 PTPDC1A2A3K4 754 aa16.73■□□□□ 0.27
MSH5-206ENST00000423982 ME1P48163 572 aa16.73■□□□□ 0.27
MSH5-206ENST00000423982 GCKRQ14397 625 aa16.73■□□□□ 0.27
MSH5-206ENST00000423982 ILDR1Q86SU0 546 aaPredicted RBP16.73■□□□□ 0.27
MSH5-206ENST00000423982 AMIGO3Q86WK7 504 aa16.73■□□□□ 0.27
MSH5-206ENST00000423982 FSIP1Q8NA03 581 aa16.73■□□□□ 0.27
MSH5-206ENST00000423982 ZSCAN16Q9H4T2 348 aaPredicted RBP16.73■□□□□ 0.27
MSH5-206ENST00000423982 RCOR1Q9UKL0 485 aa16.73■□□□□ 0.27
MSH5-206ENST00000423982 ENGASEQ8NFI3 743 aa16.72■□□□□ 0.27
MSH5-206ENST00000423982 DBNDD2Q9BQY9 259 aa16.72■□□□□ 0.27
MSH5-206ENST00000423982 LRRC4BQ9NT99 713 aa16.72■□□□□ 0.27
MSH5-206ENST00000423982 A0A1B0GVL5 298 aa16.72■□□□□ 0.27
MSH5-206ENST00000423982 GNPATO15228 680 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms