RNA–Protein interactions for RNA: ENST00000422933.5

HDLBP-209, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-209ENST00000422933 STRIP1Q5VSL9 837 aa12.16□□□□□ -0.46
HDLBP-209ENST00000422933 TXNRD3Q86VQ6 643 aa12.16□□□□□ -0.46
HDLBP-209ENST00000422933 TDRD7Q8NHU6 1098 aaKnown RBP12.16□□□□□ -0.46
HDLBP-209ENST00000422933 ZNF512BQ96KM6 892 aaPredicted RBP12.16□□□□□ -0.46
HDLBP-209ENST00000422933 DBNLQ9UJU6 430 aaKnown RBP12.16□□□□□ -0.46
HDLBP-209ENST00000422933 WTIPA6NIX2 430 aaPredicted RBP12.15□□□□□ -0.46
HDLBP-209ENST00000422933 FZD9O00144 591 aa12.15□□□□□ -0.46
HDLBP-209ENST00000422933 RAD17O75943 681 aa12.15□□□□□ -0.46
HDLBP-209ENST00000422933 GLRX3O76003 335 aaKnown RBP12.15□□□□□ -0.46
HDLBP-209ENST00000422933 KLRK1P26718 216 aa12.15□□□□□ -0.46
HDLBP-209ENST00000422933 LMOD1P29536 600 aaPredicted RBP12.15□□□□□ -0.46
HDLBP-209ENST00000422933 PHKA1P46020 1223 aa12.15□□□□□ -0.46
HDLBP-209ENST00000422933 MMP14P50281 582 aa12.15□□□□□ -0.46
HDLBP-209ENST00000422933 TTF1Q15361 905 aaPredicted RBP12.15□□□□□ -0.46
HDLBP-209ENST00000422933 SLC51AQ86UW1 340 aa12.15□□□□□ -0.46
HDLBP-209ENST00000422933 POTEDQ86YR6 584 aa12.15□□□□□ -0.46
HDLBP-209ENST00000422933 OGFOD1Q8N543 542 aa12.15□□□□□ -0.46
HDLBP-209ENST00000422933 SPATA5Q8NB90 893 aa12.15□□□□□ -0.46
HDLBP-209ENST00000422933 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.15□□□□□ -0.469e-7■□□□□ 8.6
HDLBP-209ENST00000422933 HDAC9Q9UKV0 1011 aa12.15□□□□□ -0.46
HDLBP-209ENST00000422933 IQSEC3Q9UPP2 1182 aaPredicted RBP12.15□□□□□ -0.46
HDLBP-209ENST00000422933 GTF3C3Q9Y5Q9 886 aa12.15□□□□□ -0.46
HDLBP-209ENST00000422933 GJA3Q9Y6H8 435 aa12.15□□□□□ -0.46
HDLBP-209ENST00000422933 KDM2BQ8NHM5 1336 aa12.14□□□□□ -0.47
HDLBP-209ENST00000422933 ZBTB22O15209 634 aa12.14□□□□□ -0.47
HDLBP-209ENST00000422933 IGSF3O75054 1194 aa12.14□□□□□ -0.47
HDLBP-209ENST00000422933 TOMM70O94826 608 aa12.14□□□□□ -0.47
HDLBP-209ENST00000422933 ATP5JP18859 108 aa12.14□□□□□ -0.47
HDLBP-209ENST00000422933 RPS12P25398 132 aaKnown RBP12.14□□□□□ -0.47
HDLBP-209ENST00000422933 ARID4AP29374 1257 aaPredicted RBP12.14□□□□□ -0.47
HDLBP-209ENST00000422933 FKBP1AP62942 108 aaKnown RBP12.14□□□□□ -0.47
HDLBP-209ENST00000422933 SLF2Q8IX21 1173 aa12.14□□□□□ -0.47
HDLBP-209ENST00000422933 GPC2Q8N158 579 aa12.14□□□□□ -0.47
HDLBP-209ENST00000422933 TIAM2Q8IVF5 1701 aa12.14□□□□□ -0.47
HDLBP-209ENST00000422933 MAST3O60307 1309 aa12.13□□□□□ -0.47
HDLBP-209ENST00000422933 PDS5AQ29RF7 1337 aaKnown RBP12.13□□□□□ -0.47
HDLBP-209ENST00000422933 FAM205AQ6ZU69 1335 aa12.13□□□□□ -0.47
HDLBP-209ENST00000422933 APLP1P51693 650 aa12.13□□□□□ -0.47
HDLBP-209ENST00000422933 PRELPP51888 382 aa12.13□□□□□ -0.47
HDLBP-209ENST00000422933 CXCL9Q07325 125 aa12.13□□□□□ -0.47
HDLBP-209ENST00000422933 MFSD14BQ5SR56 506 aa12.13□□□□□ -0.47
HDLBP-209ENST00000422933 AGBL3Q8NEM8 1001 aa12.13□□□□□ -0.47
HDLBP-209ENST00000422933 DNAJC2Q99543 621 aaKnown RBP12.13□□□□□ -0.47
HDLBP-209ENST00000422933 TLR7Q9NYK1 1049 aaKnown RBP12.13□□□□□ -0.47
HDLBP-209ENST00000422933 LRP2BPQ9P2M1 347 aa12.13□□□□□ -0.47
HDLBP-209ENST00000422933 ABCF2Q9UG63 623 aa12.13□□□□□ -0.47
HDLBP-209ENST00000422933 SUGT1Q9Y2Z0 365 aa12.13□□□□□ -0.47
HDLBP-209ENST00000422933 AOX1Q06278 1338 aa12.12□□□□□ -0.47
HDLBP-209ENST00000422933 IRS2Q9Y4H2 1338 aa12.12□□□□□ -0.47
HDLBP-209ENST00000422933 H7C1D1 291 aa12.12□□□□□ -0.47
HDLBP-209ENST00000422933 PSMD14O00487 310 aa12.12□□□□□ -0.47
HDLBP-209ENST00000422933 LDHBP07195 334 aaKnown RBP12.12□□□□□ -0.47
HDLBP-209ENST00000422933 VIL1P09327 827 aaKnown RBP12.12□□□□□ -0.47
HDLBP-209ENST00000422933 PDE1AP54750 535 aa12.12□□□□□ -0.47
HDLBP-209ENST00000422933 RASGRF1Q13972 1273 aa12.12□□□□□ -0.47
HDLBP-209ENST00000422933 ZSCAN25Q6NSZ9 544 aa12.12□□□□□ -0.47
HDLBP-209ENST00000422933 RSBN1LQ6PCB5 846 aaPredicted RBP12.12□□□□□ -0.47
HDLBP-209ENST00000422933 ERICH6Q7L0X2 663 aa12.12□□□□□ -0.47
HDLBP-209ENST00000422933 C16orf71Q8IYS4 520 aaPredicted RBP12.12□□□□□ -0.47
HDLBP-209ENST00000422933 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.12□□□□□ -0.474e-7■□□□□ 9.9
HDLBP-209ENST00000422933 BOLA2Q9H3K6 86 aa12.12□□□□□ -0.47
HDLBP-209ENST00000422933 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.12□□□□□ -0.47
HDLBP-209ENST00000422933 PSME4Q14997 1843 aa12.11□□□□□ -0.47
HDLBP-209ENST00000422933 IQCA1LA6NCM1 817 aa12.11□□□□□ -0.47
HDLBP-209ENST00000422933 GLTPD2A6NH11 291 aa12.11□□□□□ -0.47
HDLBP-209ENST00000422933 YDJCA8MPS7 323 aa12.11□□□□□ -0.47
HDLBP-209ENST00000422933 TRIM6-TRIM34B2RNG4 842 aa12.11□□□□□ -0.47
HDLBP-209ENST00000422933 LDHCP07864 332 aa12.11□□□□□ -0.47
HDLBP-209ENST00000422933 MCAMP43121 646 aa12.11□□□□□ -0.47
HDLBP-209ENST00000422933 GSTO1P78417 241 aa12.11□□□□□ -0.47
HDLBP-209ENST00000422933 MAP3K12Q12852 859 aa12.11□□□□□ -0.47
HDLBP-209ENST00000422933 TMED8Q6PL24 325 aaPredicted RBP12.11□□□□□ -0.47
HDLBP-209ENST00000422933 DZIP1Q86YF9 867 aaKnown RBP12.11□□□□□ -0.47
HDLBP-209ENST00000422933 DPF2Q92785 391 aa12.11□□□□□ -0.47
HDLBP-209ENST00000422933 NOL10Q9BSC4 688 aaKnown RBP12.11□□□□□ -0.47
HDLBP-209ENST00000422933 SNRKQ9NRH2 765 aa12.11□□□□□ -0.47
HDLBP-209ENST00000422933 RAI14Q9P0K7 980 aa12.11□□□□□ -0.47
HDLBP-209ENST00000422933 HMG20BQ9P0W2 317 aa12.11□□□□□ -0.47
HDLBP-209ENST00000422933 STAP2Q9UGK3 403 aa12.11□□□□□ -0.47
HDLBP-209ENST00000422933 SALL1Q9NSC2 1324 aa12.11□□□□□ -0.47
HDLBP-209ENST00000422933 PCNTO95613 3336 aa12.1□□□□□ -0.47
HDLBP-209ENST00000422933 USP17L8P0C7I0 530 aa12.1□□□□□ -0.47
HDLBP-209ENST00000422933 ZAP70P43403 619 aa12.1□□□□□ -0.47
HDLBP-209ENST00000422933 DACT2Q5SW24 774 aa12.1□□□□□ -0.47
HDLBP-209ENST00000422933 COL13A1Q5TAT6 717 aaPredicted RBP12.1□□□□□ -0.47
HDLBP-209ENST00000422933 PLEKHM2Q8IWE5 1019 aa12.1□□□□□ -0.47
HDLBP-209ENST00000422933 CNTROBQ8N137 903 aa12.1□□□□□ -0.47
HDLBP-209ENST00000422933 HAUS7Q99871 368 aa12.1□□□□□ -0.47
HDLBP-209ENST00000422933 OSBPL3Q9H4L5 887 aa12.1□□□□□ -0.47
HDLBP-209ENST00000422933 PAG1Q9NWQ8 432 aa12.1□□□□□ -0.47
HDLBP-209ENST00000422933 GOLIM4O00461 696 aa12.09□□□□□ -0.47
HDLBP-209ENST00000422933 IDH1O75874 414 aaKnown RBP12.09□□□□□ -0.47
HDLBP-209ENST00000422933 RGS3P49796 1198 aa12.09□□□□□ -0.47
HDLBP-209ENST00000422933 RBM5P52756 815 aaKnown RBP eCLIP12.09□□□□□ -0.47
HDLBP-209ENST00000422933 KCNQ5Q9NR82 932 aa12.09□□□□□ -0.47
HDLBP-209ENST00000422933 TTF2Q9UNY4 1162 aaKnown RBP12.09□□□□□ -0.47
HDLBP-209ENST00000422933 JAG2Q9Y219 1238 aa12.09□□□□□ -0.47
HDLBP-209ENST00000422933 ZNF541Q9H0D2 1346 aa12.09□□□□□ -0.47
HDLBP-209ENST00000422933 SCN9AQ15858 1988 aa12.09□□□□□ -0.47
HDLBP-209ENST00000422933 AKAP11Q9UKA4 1901 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms