RNA–Protein interactions for RNA: ENST00000417033.1

MDC1-203, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 916 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-203ENST00000417033 FBXO33Q7Z6M2 555 aa9.89□□□□□ -0.83
MDC1-203ENST00000417033 PI4K2BQ8TCG2 481 aa9.89□□□□□ -0.83
MDC1-203ENST00000417033 RNF25Q96BH1 459 aaPredicted RBP9.89□□□□□ -0.83
MDC1-203ENST00000417033 EDC3Q96F86 508 aaKnown RBP9.89□□□□□ -0.83
MDC1-203ENST00000417033 TAOK3Q9H2K8 898 aa9.89□□□□□ -0.83
MDC1-203ENST00000417033 DBNDD1Q9H9R9 158 aa9.89□□□□□ -0.83
MDC1-203ENST00000417033 PPIP5K2O43314 1243 aa9.88□□□□□ -0.83
MDC1-203ENST00000417033 MAP4K4O95819 1239 aaPredicted RBP9.88□□□□□ -0.83
MDC1-203ENST00000417033 GSPT1P15170 499 aaKnown RBP9.88□□□□□ -0.83
MDC1-203ENST00000417033 MCAMP43121 646 aa9.88□□□□□ -0.83
MDC1-203ENST00000417033 RASGRF1Q13972 1273 aa9.88□□□□□ -0.83
MDC1-203ENST00000417033 WASHC4Q2M389 1173 aa9.88□□□□□ -0.83
MDC1-203ENST00000417033 ARHGAP27Q6ZUM4 889 aa9.88□□□□□ -0.83
MDC1-203ENST00000417033 ZNF467Q7Z7K2 595 aaPredicted RBP9.88□□□□□ -0.83
MDC1-203ENST00000417033 RTKN2Q8IZC4 609 aa9.88□□□□□ -0.83
MDC1-203ENST00000417033 PSMD1Q99460 953 aa9.88□□□□□ -0.83
MDC1-203ENST00000417033 TMX4Q9H1E5 349 aaPredicted RBP9.88□□□□□ -0.83
MDC1-203ENST00000417033 BOLA2Q9H3K6 86 aa9.88□□□□□ -0.83
MDC1-203ENST00000417033 KCNQ5Q9NR82 932 aa9.88□□□□□ -0.83
MDC1-203ENST00000417033 SNRKQ9NRH2 765 aa9.88□□□□□ -0.83
MDC1-203ENST00000417033 YDJCA8MPS7 323 aa9.87□□□□□ -0.83
MDC1-203ENST00000417033 ARID4AP29374 1257 aaPredicted RBP9.87□□□□□ -0.83
MDC1-203ENST00000417033 HIBADHP31937 336 aaKnown RBP9.87□□□□□ -0.83
MDC1-203ENST00000417033 IARSP41252 1262 aaKnown RBP9.87□□□□□ -0.83
MDC1-203ENST00000417033 KIAA2012Q0VF49 1180 aa9.87□□□□□ -0.83
MDC1-203ENST00000417033 GPR162Q16538 588 aa9.87□□□□□ -0.83
MDC1-203ENST00000417033 TTC39AQ5SRH9 613 aa9.87□□□□□ -0.83
MDC1-203ENST00000417033 GORABQ5T7V8 394 aa9.87□□□□□ -0.83
MDC1-203ENST00000417033 SOGA3Q5TF21 947 aa9.87□□□□□ -0.83
MDC1-203ENST00000417033 CD209Q9NNX6 404 aa9.87□□□□□ -0.83
MDC1-203ENST00000417033 ECHDC1Q9NTX5 307 aa9.87□□□□□ -0.83
MDC1-203ENST00000417033 STAP2Q9UGK3 403 aa9.87□□□□□ -0.83
MDC1-203ENST00000417033 LTBP3Q9NS15 1303 aa9.86□□□□□ -0.83
MDC1-203ENST00000417033 CHD4Q14839 1912 aa9.86□□□□□ -0.83
MDC1-203ENST00000417033 ECE2O60344 883 aa9.86□□□□□ -0.83
MDC1-203ENST00000417033 ZAP70P43403 619 aa9.86□□□□□ -0.83
MDC1-203ENST00000417033 CHAF1AQ13111 956 aaPredicted RBP9.86□□□□□ -0.83
MDC1-203ENST00000417033 GRIK5Q16478 980 aa9.86□□□□□ -0.83
MDC1-203ENST00000417033 ZNF804AQ7Z570 1209 aa9.86□□□□□ -0.83
MDC1-203ENST00000417033 LARGE2Q8N3Y3 721 aa9.86□□□□□ -0.83
MDC1-203ENST00000417033 TDRD7Q8NHU6 1098 aaKnown RBP9.86□□□□□ -0.83
MDC1-203ENST00000417033 EYA3Q99504 573 aa9.86□□□□□ -0.83
MDC1-203ENST00000417033 DNAJC2Q99543 621 aaKnown RBP9.86□□□□□ -0.83
MDC1-203ENST00000417033 MXD3Q9BW11 206 aa9.86□□□□□ -0.83
MDC1-203ENST00000417033 ZC3H12CQ9C0D7 883 aaKnown RBP9.86□□□□□ -0.83
MDC1-203ENST00000417033 ANTXR1Q9H6X2 564 aa9.86□□□□□ -0.83
MDC1-203ENST00000417033 HMG20BQ9P0W2 317 aa9.86□□□□□ -0.83
MDC1-203ENST00000417033 SCN9AQ15858 1988 aa9.86□□□□□ -0.83
MDC1-203ENST00000417033 TTC41PQ6P2S7 1318 aa9.85□□□□□ -0.83
MDC1-203ENST00000417033 CHGBP05060 677 aa9.85□□□□□ -0.83
MDC1-203ENST00000417033 ATP5JP18859 108 aa9.85□□□□□ -0.83
MDC1-203ENST00000417033 CAVIN4Q5BKX8 364 aa9.85□□□□□ -0.83
MDC1-203ENST00000417033 CCDC158Q5M9N0 1113 aa9.85□□□□□ -0.83
MDC1-203ENST00000417033 TTC22Q5TAA0 569 aa9.85□□□□□ -0.83
MDC1-203ENST00000417033 TBC1D9Q6ZT07 1266 aa9.85□□□□□ -0.83
MDC1-203ENST00000417033 VPS37DQ86XT2 251 aa9.85□□□□□ -0.83
MDC1-203ENST00000417033 SUPT20HQ8NEM7 779 aa9.85□□□□□ -0.83
MDC1-203ENST00000417033 COA1Q9GZY4 146 aa9.85□□□□□ -0.83
MDC1-203ENST00000417033 OSBPL3Q9H4L5 887 aa9.85□□□□□ -0.83
MDC1-203ENST00000417033 PIH1D3Q9NQM4 214 aaKnown RBP9.85□□□□□ -0.83
MDC1-203ENST00000417033 AKAP11Q9UKA4 1901 aa9.85□□□□□ -0.83
MDC1-203ENST00000417033 AOX1Q06278 1338 aa9.84□□□□□ -0.83
MDC1-203ENST00000417033 GOLIM4O00461 696 aa9.84□□□□□ -0.83
MDC1-203ENST00000417033 GLRX3O76003 335 aaKnown RBP9.84□□□□□ -0.83
MDC1-203ENST00000417033 UQCRFS1P1P0C7P4 283 aa9.84□□□□□ -0.83
MDC1-203ENST00000417033 IL1R1P14778 569 aa9.84□□□□□ -0.83
MDC1-203ENST00000417033 GTF2IP78347 998 aa9.84□□□□□ -0.83
MDC1-203ENST00000417033 SLFNL1Q499Z3 407 aa9.84□□□□□ -0.83
MDC1-203ENST00000417033 GRIPAP1Q4V328 841 aa9.84□□□□□ -0.83
MDC1-203ENST00000417033 SPATA5Q8NB90 893 aa9.84□□□□□ -0.83
MDC1-203ENST00000417033 FBXW7Q969H0 707 aa9.84□□□□□ -0.83
MDC1-203ENST00000417033 GPATCH3Q96I76 525 aa9.84□□□□□ -0.83
MDC1-203ENST00000417033 ZNF512BQ96KM6 892 aaPredicted RBP9.84□□□□□ -0.83
MDC1-203ENST00000417033 HAUS7Q99871 368 aa9.84□□□□□ -0.83
MDC1-203ENST00000417033 ZNF646O15015 1829 aaPredicted RBP9.84□□□□□ -0.83
MDC1-203ENST00000417033 ZNF541Q9H0D2 1346 aa9.83□□□□□ -0.84
MDC1-203ENST00000417033 RAD17O75943 681 aa9.83□□□□□ -0.84
MDC1-203ENST00000417033 CYP2E1P05181 493 aaPredicted RBP9.83□□□□□ -0.84
MDC1-203ENST00000417033 POTEHQ6S545 545 aa9.83□□□□□ -0.84
MDC1-203ENST00000417033 NIM1KQ8IY84 436 aa9.83□□□□□ -0.84
MDC1-203ENST00000417033 CERS5Q8N5B7 392 aa9.83□□□□□ -0.84
MDC1-203ENST00000417033 ZNF579Q8NAF0 562 aaKnown RBP9.83□□□□□ -0.84
MDC1-203ENST00000417033 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.83□□□□□ -0.84
MDC1-203ENST00000417033 RNF181Q9P0P0 153 aa9.83□□□□□ -0.84
MDC1-203ENST00000417033 G3V3G9 751 aa9.82□□□□□ -0.84
MDC1-203ENST00000417033 HAX1O00165 279 aa9.82□□□□□ -0.84
MDC1-203ENST00000417033 ERC2O15083 957 aa9.82□□□□□ -0.84
MDC1-203ENST00000417033 FRAT2O75474 233 aaPredicted RBP9.82□□□□□ -0.84
MDC1-203ENST00000417033 SDSP20132 328 aa9.82□□□□□ -0.84
MDC1-203ENST00000417033 LMNB1P20700 586 aa9.82□□□□□ -0.84
MDC1-203ENST00000417033 PRDX5P30044 214 aa9.82□□□□□ -0.84
MDC1-203ENST00000417033 C9orf131Q5VYM1 1079 aa9.82□□□□□ -0.84
MDC1-203ENST00000417033 HS6ST3Q8IZP7 471 aa9.82□□□□□ -0.84
MDC1-203ENST00000417033 GNL3LQ9NVN8 582 aaKnown RBP9.82□□□□□ -0.84
MDC1-203ENST00000417033 PAG1Q9NWQ8 432 aa9.82□□□□□ -0.84
MDC1-203ENST00000417033 DENND2AQ9ULE3 1009 aa9.82□□□□□ -0.84
MDC1-203ENST00000417033 SBF1O95248 1867 aa9.82□□□□□ -0.84
MDC1-203ENST00000417033 CCDC88AQ3V6T2 1871 aa9.82□□□□□ -0.84
MDC1-203ENST00000417033 FAM205AQ6ZU69 1335 aa9.82□□□□□ -0.84
MDC1-203ENST00000417033 SHTN1A0MZ66 631 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms