RNA–Protein interactions for RNA: ENST00000416918.5

TRAPPC12-205, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 473 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-205ENST00000416918 FAM177BA6PVY3 158 aa13.05□□□□□ -0.32
TRAPPC12-205ENST00000416918 PATL2C9JE40 543 aaKnown RBP13.05□□□□□ -0.32
TRAPPC12-205ENST00000416918 M0R2C6 588 aa13.05□□□□□ -0.32
TRAPPC12-205ENST00000416918 IDH1O75874 414 aaKnown RBP13.05□□□□□ -0.32
TRAPPC12-205ENST00000416918 PHF14O94880 888 aa13.05□□□□□ -0.32
TRAPPC12-205ENST00000416918 LETM1O95202 739 aaPredicted RBP13.05□□□□□ -0.32
TRAPPC12-205ENST00000416918 FGAP02671 866 aa13.05□□□□□ -0.32
TRAPPC12-205ENST00000416918 PCP11498 1178 aaKnown RBP13.05□□□□□ -0.32
TRAPPC12-205ENST00000416918 GJB2P29033 226 aa13.05□□□□□ -0.32
TRAPPC12-205ENST00000416918 SCARF1Q14162 830 aa13.05□□□□□ -0.32
TRAPPC12-205ENST00000416918 LARP1BQ659C4 914 aaKnown RBP13.05□□□□□ -0.32
TRAPPC12-205ENST00000416918 ATL3Q6DD88 541 aa13.05□□□□□ -0.32
TRAPPC12-205ENST00000416918 CCDC129Q6ZRS4 1044 aa13.05□□□□□ -0.32
TRAPPC12-205ENST00000416918 Q6ZUG5 572 aa13.05□□□□□ -0.32
TRAPPC12-205ENST00000416918 NOL8Q76FK4 1167 aaKnown RBP13.05□□□□□ -0.32
TRAPPC12-205ENST00000416918 KRT27Q7Z3Y8 459 aa13.05□□□□□ -0.32
TRAPPC12-205ENST00000416918 TMC4Q7Z404 712 aa13.05□□□□□ -0.32
TRAPPC12-205ENST00000416918 CCDC83Q8IWF9 413 aa13.05□□□□□ -0.32
TRAPPC12-205ENST00000416918 GTF3C6Q969F1 213 aa13.05□□□□□ -0.32
TRAPPC12-205ENST00000416918 MINPP1Q9UNW1 487 aa13.05□□□□□ -0.32
TRAPPC12-205ENST00000416918 NDUFB9Q9Y6M9 179 aa13.05□□□□□ -0.32
TRAPPC12-205ENST00000416918 PNPLA7Q6ZV29 1317 aa13.05□□□□□ -0.32
TRAPPC12-205ENST00000416918 SCN7AQ01118 1682 aa13.05□□□□□ -0.32
TRAPPC12-205ENST00000416918 BTAF1O14981 1849 aa13.04□□□□□ -0.32
TRAPPC12-205ENST00000416918 F13A1P00488 732 aa13.04□□□□□ -0.32
TRAPPC12-205ENST00000416918 RASGRF1Q13972 1273 aa13.04□□□□□ -0.32
TRAPPC12-205ENST00000416918 VPS37DQ86XT2 251 aa13.04□□□□□ -0.32
TRAPPC12-205ENST00000416918 CERS3Q8IU89 383 aa13.04□□□□□ -0.32
TRAPPC12-205ENST00000416918 FLAD1Q8NFF5 587 aa13.04□□□□□ -0.32
TRAPPC12-205ENST00000416918 ZSCAN16Q9H4T2 348 aaPredicted RBP13.04□□□□□ -0.32
TRAPPC12-205ENST00000416918 LEMD3Q9Y2U8 911 aa13.04□□□□□ -0.32
TRAPPC12-205ENST00000416918 ZNF532Q9HCE3 1301 aa13.04□□□□□ -0.32
TRAPPC12-205ENST00000416918 ARAP2Q8WZ64 1704 aa13.04□□□□□ -0.32
TRAPPC12-205ENST00000416918 TCRBV5S4A2TA0A5A2 114 aa13.03□□□□□ -0.32
TRAPPC12-205ENST00000416918 NPHP1O15259 732 aa13.03□□□□□ -0.32
TRAPPC12-205ENST00000416918 PRPF40AO75400 957 aaKnown RBP13.03□□□□□ -0.32
TRAPPC12-205ENST00000416918 ZNF445P59923 1031 aa13.03□□□□□ -0.32
TRAPPC12-205ENST00000416918 SPTY2D1Q68D10 685 aaPredicted RBP13.03□□□□□ -0.32
TRAPPC12-205ENST00000416918 GIMAP6Q6P9H5 292 aa13.03□□□□□ -0.32
TRAPPC12-205ENST00000416918 FBXO33Q7Z6M2 555 aa13.03□□□□□ -0.32
TRAPPC12-205ENST00000416918 TMTC2Q8N394 836 aa13.03□□□□□ -0.32
TRAPPC12-205ENST00000416918 TMEM87BQ96K49 555 aa13.03□□□□□ -0.32
TRAPPC12-205ENST00000416918 STRBPQ96SI9 672 aaKnown RBP13.03□□□□□ -0.32
TRAPPC12-205ENST00000416918 PUS7LQ9H0K6 701 aaKnown RBP13.03□□□□□ -0.32
TRAPPC12-205ENST00000416918 RNF41Q9H4P4 317 aaPredicted RBP13.03□□□□□ -0.32
TRAPPC12-205ENST00000416918 PIH1D3Q9NQM4 214 aaKnown RBP13.03□□□□□ -0.32
TRAPPC12-205ENST00000416918 LRP2BPQ9P2M1 347 aa13.03□□□□□ -0.32
TRAPPC12-205ENST00000416918 LY75O60449 1722 aa13.02□□□□□ -0.32
TRAPPC12-205ENST00000416918 CPA1P15085 419 aa13.02□□□□□ -0.33
TRAPPC12-205ENST00000416918 RBM6P78332 1123 aaKnown RBP13.02□□□□□ -0.33
TRAPPC12-205ENST00000416918 PKP1Q13835 747 aa13.02□□□□□ -0.33
TRAPPC12-205ENST00000416918 NAA16Q6N069 864 aaPredicted RBP13.02□□□□□ -0.33
TRAPPC12-205ENST00000416918 CPLX2Q6PUV4 134 aaKnown RBP13.02□□□□□ -0.33
TRAPPC12-205ENST00000416918 C15orf52Q6ZUT6 534 aaKnown RBP13.02□□□□□ -0.33
TRAPPC12-205ENST00000416918 HELBQ8NG08 1087 aaPredicted RBP13.02□□□□□ -0.33
TRAPPC12-205ENST00000416918 KRT23Q9C075 422 aa13.02□□□□□ -0.33
TRAPPC12-205ENST00000416918 SCAND2PQ9GZW5 306 aaPredicted RBP13.02□□□□□ -0.33
TRAPPC12-205ENST00000416918 MTMR6Q9Y217 621 aa13.02□□□□□ -0.33
TRAPPC12-205ENST00000416918 DDX60Q8IY21 1712 aaKnown RBP13.02□□□□□ -0.33
TRAPPC12-205ENST00000416918 PLSCR1O15162 318 aa13.01□□□□□ -0.33
TRAPPC12-205ENST00000416918 APPP05067 770 aa13.01□□□□□ -0.33
TRAPPC12-205ENST00000416918 RCAN1P53805 252 aa13.01□□□□□ -0.33
TRAPPC12-205ENST00000416918 UBE2HP62256 183 aa13.01□□□□□ -0.33
TRAPPC12-205ENST00000416918 ST5P78524 1137 aa13.01□□□□□ -0.33
TRAPPC12-205ENST00000416918 BICDL1Q6ZP65 573 aa13.01□□□□□ -0.33
TRAPPC12-205ENST00000416918 CNBD1Q8NA66 436 aa13.01□□□□□ -0.33
TRAPPC12-205ENST00000416918 FAM184AQ8NB25 1140 aa13.01□□□□□ -0.33
TRAPPC12-205ENST00000416918 SMARCC2Q8TAQ2 1214 aa13.01□□□□□ -0.33
TRAPPC12-205ENST00000416918 BRF1Q92994 677 aa13.01□□□□□ -0.33
TRAPPC12-205ENST00000416918 ELP1O95163 1332 aa13□□□□□ -0.33
TRAPPC12-205ENST00000416918 BBOX1O75936 387 aa13□□□□□ -0.33
TRAPPC12-205ENST00000416918 CDKL5O76039 1030 aa13□□□□□ -0.33
TRAPPC12-205ENST00000416918 HIBADHP31937 336 aaKnown RBP13□□□□□ -0.33
TRAPPC12-205ENST00000416918 BCAMP50895 628 aa13□□□□□ -0.33
TRAPPC12-205ENST00000416918 KRT85P78386 507 aa13□□□□□ -0.33
TRAPPC12-205ENST00000416918 GRAPQ13588 217 aa13□□□□□ -0.33
TRAPPC12-205ENST00000416918 SART3Q15020 963 aaKnown RBP13□□□□□ -0.33
TRAPPC12-205ENST00000416918 PPP2R5BQ15173 497 aa13□□□□□ -0.33
TRAPPC12-205ENST00000416918 STOX1Q6ZVD7 989 aa13□□□□□ -0.33
TRAPPC12-205ENST00000416918 MB21D2Q8IYB1 491 aaPredicted RBP13□□□□□ -0.33
TRAPPC12-205ENST00000416918 MAGEB6Q8N7X4 407 aa13□□□□□ -0.33
TRAPPC12-205ENST00000416918 GRAPLQ8TC17 118 aaPredicted RBP13□□□□□ -0.33
TRAPPC12-205ENST00000416918 ANP32BQ92688 251 aaKnown RBP13□□□□□ -0.33
TRAPPC12-205ENST00000416918 NAPBQ9H115 298 aa13□□□□□ -0.33
TRAPPC12-205ENST00000416918 AKAP11Q9UKA4 1901 aa13□□□□□ -0.33
TRAPPC12-205ENST00000416918 COL24A1Q17RW2 1714 aa12.99□□□□□ -0.33
TRAPPC12-205ENST00000416918 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.99□□□□□ -0.33
TRAPPC12-205ENST00000416918 PRC1O43663 620 aa12.99□□□□□ -0.33
TRAPPC12-205ENST00000416918 LARGE1O95461 756 aa12.99□□□□□ -0.33
TRAPPC12-205ENST00000416918 LIFRP42702 1097 aa12.99□□□□□ -0.33
TRAPPC12-205ENST00000416918 NECAB1Q8N987 351 aa12.99□□□□□ -0.33
TRAPPC12-205ENST00000416918 RBM17Q96I25 401 aaKnown RBP12.99□□□□□ -0.33
TRAPPC12-205ENST00000416918 FAM84BQ96KN1 310 aaPredicted RBP12.99□□□□□ -0.33
TRAPPC12-205ENST00000416918 SRP68Q9UHB9 627 aaKnown RBP12.99□□□□□ -0.33
TRAPPC12-205ENST00000416918 CFAP45Q9UL16 551 aa12.99□□□□□ -0.33
TRAPPC12-205ENST00000416918 C4BP0C0L5 1744 aa12.99□□□□□ -0.33
TRAPPC12-205ENST00000416918 SALL1Q9NSC2 1324 aa12.98□□□□□ -0.33
TRAPPC12-205ENST00000416918 H3BQV1 296 aa12.98□□□□□ -0.33
TRAPPC12-205ENST00000416918 FOXP2O15409 715 aa12.98□□□□□ -0.33
TRAPPC12-205ENST00000416918 PDIA3P30101 505 aaKnown RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms