RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 RTL1A6NKG5 1358 aa6□□□□□ -1.45
HERC4-205ENST00000412272 DISP3Q9P2K9 1392 aa6□□□□□ -1.45
HERC4-205ENST00000412272 PDLIM1O00151 329 aa6□□□□□ -1.45
HERC4-205ENST00000412272 APBB1O00213 710 aa6□□□□□ -1.45
HERC4-205ENST00000412272 RAB11FIP3O75154 756 aa6□□□□□ -1.45
HERC4-205ENST00000412272 OTUD6AQ7L8S5 288 aa6□□□□□ -1.45
HERC4-205ENST00000412272 LMBR1Q8WVP7 490 aa6□□□□□ -1.45
HERC4-205ENST00000412272 SPDL1Q96EA4 605 aa6□□□□□ -1.45
HERC4-205ENST00000412272 RBM41Q96IZ5 413 aaKnown RBP6□□□□□ -1.45
HERC4-205ENST00000412272 BRD8Q9H0E9 1235 aa6□□□□□ -1.45
HERC4-205ENST00000412272 NSFL1CQ9UNZ2 370 aaKnown RBP6□□□□□ -1.45
HERC4-205ENST00000412272 FRMD3A2A2Y4 597 aa6□□□□□ -1.45
HERC4-205ENST00000412272 RNF8O76064 485 aa6□□□□□ -1.45
HERC4-205ENST00000412272 HDAC4P56524 1084 aa6□□□□□ -1.45
HERC4-205ENST00000412272 MAP3K9P80192 1104 aa6□□□□□ -1.45
HERC4-205ENST00000412272 PDE4BQ07343 736 aa6□□□□□ -1.45
HERC4-205ENST00000412272 SMC1AQ14683 1233 aaKnown RBP6□□□□□ -1.45
HERC4-205ENST00000412272 MYBPC3Q14896 1274 aa6□□□□□ -1.45
HERC4-205ENST00000412272 KBTBD12Q3ZCT8 623 aa6□□□□□ -1.45
HERC4-205ENST00000412272 FAAH2Q6GMR7 532 aa6□□□□□ -1.45
HERC4-205ENST00000412272 SMYD1Q8NB12 490 aa6□□□□□ -1.45
HERC4-205ENST00000412272 ATP11CQ8NB49 1132 aa6□□□□□ -1.45
HERC4-205ENST00000412272 UTP14AQ9BVJ6 771 aaKnown RBP6□□□□□ -1.45
HERC4-205ENST00000412272 INO80Q9ULG1 1556 aaPredicted RBP5.99□□□□□ -1.45
HERC4-205ENST00000412272 CCDC171Q6TFL3 1326 aa5.99□□□□□ -1.45
HERC4-205ENST00000412272 TBC1D8O95759 1140 aa5.99□□□□□ -1.45
HERC4-205ENST00000412272 CDC25BP30305 580 aa5.99□□□□□ -1.45
HERC4-205ENST00000412272 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.99□□□□□ -1.45
HERC4-205ENST00000412272 KIRREL3Q8IZU9 778 aa5.99□□□□□ -1.45
HERC4-205ENST00000412272 CCDC114Q96M63 670 aa5.99□□□□□ -1.45
HERC4-205ENST00000412272 UBAP1Q9NZ09 502 aa5.99□□□□□ -1.45
HERC4-205ENST00000412272 ERC2O15083 957 aa5.99□□□□□ -1.45
HERC4-205ENST00000412272 HOXD11P31277 338 aaPredicted RBP5.99□□□□□ -1.45
HERC4-205ENST00000412272 LIG3P49916 1009 aa5.99□□□□□ -1.45
HERC4-205ENST00000412272 CABS1Q96KC9 395 aa5.99□□□□□ -1.45
HERC4-205ENST00000412272 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.99□□□□□ -1.45
HERC4-205ENST00000412272 DIS3Q9Y2L1 958 aaKnown RBP5.99□□□□□ -1.45
HERC4-205ENST00000412272 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.99□□□□□ -1.45
HERC4-205ENST00000412272 KCNA1Q09470 495 aa5.99□□□□□ -1.45
HERC4-205ENST00000412272 OLFML1Q6UWY5 402 aa5.99□□□□□ -1.45
HERC4-205ENST00000412272 FAM114A1Q8IWE2 563 aa5.99□□□□□ -1.45
HERC4-205ENST00000412272 PANK1Q8TE04 598 aa5.99□□□□□ -1.45
HERC4-205ENST00000412272 TMX3Q96JJ7 454 aa5.99□□□□□ -1.45
HERC4-205ENST00000412272 INCENPQ9NQS7 918 aa5.99□□□□□ -1.45
HERC4-205ENST00000412272 TFIP11Q9UBB9 837 aaKnown RBP5.99□□□□□ -1.45
HERC4-205ENST00000412272 NOS1P29475 1434 aa5.99□□□□□ -1.45
HERC4-205ENST00000412272 TTC37Q6PGP7 1564 aa5.99□□□□□ -1.45
HERC4-205ENST00000412272 DUOX2Q9NRD8 1548 aa5.98□□□□□ -1.45
HERC4-205ENST00000412272 PRPF40AO75400 957 aaKnown RBP5.98□□□□□ -1.45
HERC4-205ENST00000412272 MBD4O95243 580 aa5.98□□□□□ -1.45
HERC4-205ENST00000412272 FOSBP53539 338 aa5.98□□□□□ -1.45
HERC4-205ENST00000412272 WDR43Q15061 677 aaKnown RBP eCLIP5.98□□□□□ -1.45
HERC4-205ENST00000412272 KIF4BQ2VIQ3 1234 aa5.98□□□□□ -1.45
HERC4-205ENST00000412272 GJC2Q5T442 439 aaPredicted RBP5.98□□□□□ -1.45
HERC4-205ENST00000412272 AMOTL1Q8IY63 956 aa5.98□□□□□ -1.45
HERC4-205ENST00000412272 BICD2Q8TD16 824 aa5.98□□□□□ -1.45
HERC4-205ENST00000412272 PMM1Q92871 262 aa5.98□□□□□ -1.45
HERC4-205ENST00000412272 L2HGDHQ9H9P8 463 aa5.98□□□□□ -1.45
HERC4-205ENST00000412272 METTL14Q9HCE5 456 aaKnown RBP5.98□□□□□ -1.45
HERC4-205ENST00000412272 RPAP1Q9BWH6 1393 aaPredicted RBP5.98□□□□□ -1.45
HERC4-205ENST00000412272 CAVIN2O95810 425 aa5.98□□□□□ -1.45
HERC4-205ENST00000412272 GCLCP48506 637 aaPredicted RBP5.98□□□□□ -1.45
HERC4-205ENST00000412272 CCDC183Q5T5S1 534 aa5.98□□□□□ -1.45
HERC4-205ENST00000412272 MORC4Q8TE76 937 aa5.98□□□□□ -1.45
HERC4-205ENST00000412272 GIMAP1Q8WWP7 306 aa5.98□□□□□ -1.45
HERC4-205ENST00000412272 TRIM4Q9C037 500 aa5.98□□□□□ -1.45
HERC4-205ENST00000412272 LRRC27Q9C0I9 530 aa5.98□□□□□ -1.45
HERC4-205ENST00000412272 FAM107BQ9H098 131 aa5.98□□□□□ -1.45
HERC4-205ENST00000412272 MADDQ8WXG6 1647 aa5.98□□□□□ -1.45
HERC4-205ENST00000412272 EFCAB6Q5THR3 1501 aa5.98□□□□□ -1.45
HERC4-205ENST00000412272 H3BQF6 201 aa5.98□□□□□ -1.45
HERC4-205ENST00000412272 TSPY4P0CV99 314 aa5.98□□□□□ -1.45
HERC4-205ENST00000412272 TSPY10P0CW01 314 aa5.98□□□□□ -1.45
HERC4-205ENST00000412272 ZNF132P52740 706 aa5.98□□□□□ -1.45
HERC4-205ENST00000412272 GNAI1P63096 354 aa5.98□□□□□ -1.45
HERC4-205ENST00000412272 ATP2B2Q01814 1243 aa5.98□□□□□ -1.45
HERC4-205ENST00000412272 G3BP1Q13283 466 aaKnown RBP eCLIP5.98□□□□□ -1.45
HERC4-205ENST00000412272 KIAA0753Q2KHM9 967 aa5.98□□□□□ -1.45
HERC4-205ENST00000412272 Q4G0T1 1027 aa5.98□□□□□ -1.45
HERC4-205ENST00000412272 KIAA1328Q86T90 577 aa5.98□□□□□ -1.45
HERC4-205ENST00000412272 CCDC65Q8IXS2 484 aa5.98□□□□□ -1.45
HERC4-205ENST00000412272 CUL5Q93034 780 aa5.98□□□□□ -1.45
HERC4-205ENST00000412272 INTS4Q96HW7 963 aaKnown RBP5.98□□□□□ -1.45
HERC4-205ENST00000412272 WDR37Q9Y2I8 494 aa5.98□□□□□ -1.45
HERC4-205ENST00000412272 PIK3R4Q99570 1358 aa5.98□□□□□ -1.45
HERC4-205ENST00000412272 AP5Z1O43299 807 aa5.98□□□□□ -1.45
HERC4-205ENST00000412272 SLU7O95391 586 aaKnown RBP5.98□□□□□ -1.45
HERC4-205ENST00000412272 FNTAP49354 379 aa5.98□□□□□ -1.45
HERC4-205ENST00000412272 CUL4AQ13619 759 aa5.98□□□□□ -1.45
HERC4-205ENST00000412272 ERCC6LQ2NKX8 1250 aa5.98□□□□□ -1.45
HERC4-205ENST00000412272 GALNT17Q6IS24 598 aa5.98□□□□□ -1.45
HERC4-205ENST00000412272 DDX11Q96FC9 970 aa5.98□□□□□ -1.45
HERC4-205ENST00000412272 SPHKAPQ2M3C7 1700 aa5.97□□□□□ -1.45
HERC4-205ENST00000412272 A0A1B0GVG6 124 aa5.97□□□□□ -1.45
HERC4-205ENST00000412272 TRIM64CA6NLI5 447 aa5.97□□□□□ -1.45
HERC4-205ENST00000412272 NEMFO60524 1076 aa5.97□□□□□ -1.45
HERC4-205ENST00000412272 HMMRO75330 724 aa5.97□□□□□ -1.45
HERC4-205ENST00000412272 USP11P51784 963 aa5.97□□□□□ -1.45
HERC4-205ENST00000412272 CLCN2P51788 898 aa5.97□□□□□ -1.45
HERC4-205ENST00000412272 GUCY1B3Q02153 619 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 114.2 ms