RNA–Protein interactions for RNA: ENST00000410016.5

HOXD3-202, Transcript of homeobox D3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HOXD3, Length 2,384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-202ENST00000410016 HLFQ16534 295 aa18.62■□□□□ 0.57
HOXD3-202ENST00000410016 ABCC12Q96J65 1359 aa18.62■□□□□ 0.57
HOXD3-202ENST00000410016 ZNF396Q96N95 335 aaPredicted RBP18.62■□□□□ 0.57
HOXD3-202ENST00000410016 NWD2Q9ULI1 1742 aa18.61■□□□□ 0.57
HOXD3-202ENST00000410016 MAP3K15Q6ZN16 1313 aa18.61■□□□□ 0.57
HOXD3-202ENST00000410016 PTGS1P23219 599 aa18.61■□□□□ 0.57
HOXD3-202ENST00000410016 ZNF75DP51815 510 aa18.61■□□□□ 0.57
HOXD3-202ENST00000410016 IQCB1Q15051 598 aa18.61■□□□□ 0.57
HOXD3-202ENST00000410016 TTLL11Q8NHH1 800 aa18.61■□□□□ 0.57
HOXD3-202ENST00000410016 HPS5Q9UPZ3 1129 aa18.61■□□□□ 0.57
HOXD3-202ENST00000410016 CDHR2Q9BYE9 1310 aa18.61■□□□□ 0.57
HOXD3-202ENST00000410016 CTAGE5O15320 804 aa18.61■□□□□ 0.57
HOXD3-202ENST00000410016 TAF7LQ5H9L4 462 aa18.61■□□□□ 0.57
HOXD3-202ENST00000410016 RIC1Q4ADV7 1423 aa18.6■□□□□ 0.57
HOXD3-202ENST00000410016 STARD3NLO95772 234 aa18.6■□□□□ 0.57
HOXD3-202ENST00000410016 MCAMP43121 646 aa18.6■□□□□ 0.57
HOXD3-202ENST00000410016 ANTXR2P58335 489 aa18.6■□□□□ 0.57
HOXD3-202ENST00000410016 NLRP10Q86W26 655 aa18.6■□□□□ 0.57
HOXD3-202ENST00000410016 PRC1O43663 620 aa18.6■□□□□ 0.57
HOXD3-202ENST00000410016 ATP2B3Q16720 1220 aa18.6■□□□□ 0.57
HOXD3-202ENST00000410016 HSP90AB3PQ58FF7 597 aa18.6■□□□□ 0.57
HOXD3-202ENST00000410016 CCDC186Q7Z3E2 898 aa18.6■□□□□ 0.57
HOXD3-202ENST00000410016 TRIM5Q9C035 493 aa18.6■□□□□ 0.57
HOXD3-202ENST00000410016 GREM2Q9H772 168 aa18.6■□□□□ 0.57
HOXD3-202ENST00000410016 GPAA1O43292 621 aa18.59■□□□□ 0.57
HOXD3-202ENST00000410016 ITGA6P23229 1130 aa18.59■□□□□ 0.57
HOXD3-202ENST00000410016 LDHAL6AQ6ZMR3 332 aa18.59■□□□□ 0.57
HOXD3-202ENST00000410016 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.59■□□□□ 0.57
HOXD3-202ENST00000410016 NRBP1Q9UHY1 535 aa18.59■□□□□ 0.57
HOXD3-202ENST00000410016 GTF2F1P35269 517 aaKnown RBP eCLIP18.59■□□□□ 0.57
HOXD3-202ENST00000410016 FAM160A1Q05DH4 1040 aa18.59■□□□□ 0.57
HOXD3-202ENST00000410016 C11orf57Q6ZUT1 292 aaPredicted RBP18.59■□□□□ 0.57
HOXD3-202ENST00000410016 VGLL2Q8N8G2 317 aa18.59■□□□□ 0.57
HOXD3-202ENST00000410016 ZNF512BQ96KM6 892 aaPredicted RBP18.59■□□□□ 0.57
HOXD3-202ENST00000410016 RTEL1Q9NZ71 1219 aa18.59■□□□□ 0.57
HOXD3-202ENST00000410016 GPTP24298 496 aa18.58■□□□□ 0.56
HOXD3-202ENST00000410016 METTL24Q5JXM2 366 aa18.58■□□□□ 0.56
HOXD3-202ENST00000410016 OTUD7BQ6GQQ9 843 aa18.58■□□□□ 0.56
HOXD3-202ENST00000410016 SLC4A9Q96Q91 983 aa18.58■□□□□ 0.56
HOXD3-202ENST00000410016 PCDHA7Q9UN72 937 aa18.58■□□□□ 0.56
HOXD3-202ENST00000410016 MYH15Q9Y2K3 1946 aa18.58■□□□□ 0.56
HOXD3-202ENST00000410016 ME1P48163 572 aa18.57■□□□□ 0.56
HOXD3-202ENST00000410016 CCDC73Q6ZRK6 1079 aa18.57■□□□□ 0.56
HOXD3-202ENST00000410016 FBXO18Q8NFZ0 1043 aa18.57■□□□□ 0.56
HOXD3-202ENST00000410016 NCOA7Q8NI08 942 aa18.57■□□□□ 0.56
HOXD3-202ENST00000410016 NBPF3Q9H094 633 aa18.57■□□□□ 0.56
HOXD3-202ENST00000410016 KLF18A0A0U1RQI7 1052 aa18.57■□□□□ 0.56
HOXD3-202ENST00000410016 ZNF213O14771 459 aa18.57■□□□□ 0.56
HOXD3-202ENST00000410016 ADD2P35612 726 aa18.56■□□□□ 0.56
HOXD3-202ENST00000410016 CTSWP56202 376 aa18.56■□□□□ 0.56
HOXD3-202ENST00000410016 ADALQ6DHV7 355 aa18.56■□□□□ 0.56
HOXD3-202ENST00000410016 SARM1Q6SZW1 724 aa18.56■□□□□ 0.56
HOXD3-202ENST00000410016 FMR1NBQ8N0W7 255 aaPredicted RBP18.56■□□□□ 0.56
HOXD3-202ENST00000410016 FSIP1Q8NA03 581 aa18.56■□□□□ 0.56
HOXD3-202ENST00000410016 LINC00301Q8NCQ3 95 aa18.56■□□□□ 0.56
HOXD3-202ENST00000410016 MAP7D2Q96T17 732 aa18.56■□□□□ 0.56
HOXD3-202ENST00000410016 ABCA3Q99758 1704 aa18.56■□□□□ 0.56
HOXD3-202ENST00000410016 WDR19Q8NEZ3 1342 aa18.56■□□□□ 0.56
HOXD3-202ENST00000410016 DHX16O60231 1041 aaKnown RBP18.56■□□□□ 0.56
HOXD3-202ENST00000410016 LRMPQ12912 555 aa18.56■□□□□ 0.56
HOXD3-202ENST00000410016 STX1AQ16623 288 aa18.56■□□□□ 0.56
HOXD3-202ENST00000410016 GOLGA8BA8MQT2 603 aa18.55■□□□□ 0.56
HOXD3-202ENST00000410016 KINO60870 393 aaKnown RBP18.55■□□□□ 0.56
HOXD3-202ENST00000410016 CYP19A1P11511 503 aaPredicted RBP18.55■□□□□ 0.56
HOXD3-202ENST00000410016 NKX2-3Q8TAU0 364 aa18.55■□□□□ 0.56
HOXD3-202ENST00000410016 C8orf76Q96K31 380 aa18.55■□□□□ 0.56
HOXD3-202ENST00000410016 DENND2AQ9ULE3 1009 aa18.55■□□□□ 0.56
HOXD3-202ENST00000410016 A0A1W2PQ27 194 aa18.55■□□□□ 0.56
HOXD3-202ENST00000410016 A0A1W2PQ64 194 aa18.55■□□□□ 0.56
HOXD3-202ENST00000410016 A0A1W2PQD8 194 aa18.55■□□□□ 0.56
HOXD3-202ENST00000410016 CDC25BP30305 580 aa18.55■□□□□ 0.56
HOXD3-202ENST00000410016 ZSCAN25Q6NSZ9 544 aa18.55■□□□□ 0.56
HOXD3-202ENST00000410016 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.55■□□□□ 0.56
HOXD3-202ENST00000410016 ORC3Q9UBD5 711 aaPredicted RBP18.55■□□□□ 0.56
HOXD3-202ENST00000410016 ANKRD18BA2A2Z9 1011 aa18.54■□□□□ 0.56
HOXD3-202ENST00000410016 IRS4O14654 1257 aaPredicted RBP18.54■□□□□ 0.56
HOXD3-202ENST00000410016 PDE8BO95263 885 aa18.54■□□□□ 0.56
HOXD3-202ENST00000410016 SLC9C2Q5TAH2 1124 aa18.54■□□□□ 0.56
HOXD3-202ENST00000410016 RALYLQ86SE5 291 aaKnown RBP18.54■□□□□ 0.56
HOXD3-202ENST00000410016 DRC7Q8IY82 874 aa18.54■□□□□ 0.56
HOXD3-202ENST00000410016 GJB4Q9NTQ9 266 aa18.54■□□□□ 0.56
HOXD3-202ENST00000410016 CLIC4Q9Y696 253 aa18.54■□□□□ 0.56
HOXD3-202ENST00000410016 AKAP11Q9UKA4 1901 aa18.54■□□□□ 0.56
HOXD3-202ENST00000410016 POLR3DP05423 398 aaPredicted RBP18.54■□□□□ 0.56
HOXD3-202ENST00000410016 DHX40Q8IX18 779 aaKnown RBP18.54■□□□□ 0.56
HOXD3-202ENST00000410016 PIH1D3Q9NQM4 214 aaKnown RBP18.54■□□□□ 0.56
HOXD3-202ENST00000410016 CNNM1Q9NRU3 951 aa18.54■□□□□ 0.56
HOXD3-202ENST00000410016 POLR3EQ9NVU0 708 aa18.54■□□□□ 0.56
HOXD3-202ENST00000410016 A0A087WWV3 80 aa18.53■□□□□ 0.56
HOXD3-202ENST00000410016 UBE3CQ15386 1083 aa18.53■□□□□ 0.56
HOXD3-202ENST00000410016 CCDC144BQ3MJ40 725 aa18.53■□□□□ 0.56
HOXD3-202ENST00000410016 RAB11FIP4Q86YS3 637 aa18.53■□□□□ 0.56
HOXD3-202ENST00000410016 CCDC144CPQ8IYA2 1237 aa18.53■□□□□ 0.56
HOXD3-202ENST00000410016 MRPS27Q92552 414 aaKnown RBP18.53■□□□□ 0.56
HOXD3-202ENST00000410016 CLIP2Q9UDT6 1046 aa18.53■□□□□ 0.56
HOXD3-202ENST00000410016 ATRNO75882 1429 aa18.53■□□□□ 0.56
HOXD3-202ENST00000410016 CACTINQ8WUQ7 758 aaKnown RBP18.53■□□□□ 0.56
HOXD3-202ENST00000410016 ZBTB1Q9Y2K1 713 aa18.53■□□□□ 0.56
HOXD3-202ENST00000410016 ZNF335Q9H4Z2 1342 aaPredicted RBP18.52■□□□□ 0.56
HOXD3-202ENST00000410016 BCL9O00512 1426 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms