RNA–Protein interactions for RNA: ENST00000406072.5

HDAC9-203, Transcript of histone deacetylase 9, humanhuman

TSL 5 BASIC

Gene HDAC9, Length 4,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-203ENST00000406072 NCBP1Q09161 790 aaKnown RBP6.75□□□□□ -1.33
HDAC9-203ENST00000406072 NAA30Q147X3 362 aaPredicted RBP6.75□□□□□ -1.33
HDAC9-203ENST00000406072 CWC27Q6UX04 472 aaKnown RBP6.75□□□□□ -1.33
HDAC9-203ENST00000406072 TAX1BP1Q86VP1 789 aa6.75□□□□□ -1.33
HDAC9-203ENST00000406072 ERC1Q8IUD2 1116 aa6.75□□□□□ -1.33
HDAC9-203ENST00000406072 NUP133Q8WUM0 1156 aa6.75□□□□□ -1.33
HDAC9-203ENST00000406072 CPLX3Q8WVH0 158 aa6.75□□□□□ -1.33
HDAC9-203ENST00000406072 RSRC1Q96IZ7 334 aaKnown RBP6.75□□□□□ -1.33
HDAC9-203ENST00000406072 CCDC114Q96M63 670 aa6.75□□□□□ -1.33
HDAC9-203ENST00000406072 CEP83Q9Y592 693 aa6.75□□□□□ -1.33
HDAC9-203ENST00000406072 RAD21O60216 631 aa6.75□□□□□ -1.33
HDAC9-203ENST00000406072 ZEB2O60315 1214 aa6.75□□□□□ -1.33
HDAC9-203ENST00000406072 BLOC1S2Q6QNY1 142 aa6.75□□□□□ -1.33
HDAC9-203ENST00000406072 PUF60Q9UHX1 559 aaKnown RBP6.75□□□□□ -1.33
HDAC9-203ENST00000406072 CTNNA3Q9UI47 895 aa6.75□□□□□ -1.33
HDAC9-203ENST00000406072 LRP5O75197 1615 aa6.74□□□□□ -1.33
HDAC9-203ENST00000406072 RHOXF2BP0C7M4 288 aa6.74□□□□□ -1.33
HDAC9-203ENST00000406072 PEX19P40855 299 aa6.74□□□□□ -1.33
HDAC9-203ENST00000406072 IQCEQ6IPM2 695 aa6.74□□□□□ -1.33
HDAC9-203ENST00000406072 RGS22Q8NE09 1264 aa6.74□□□□□ -1.33
HDAC9-203ENST00000406072 RHOXF2Q9BQY4 288 aa6.74□□□□□ -1.33
HDAC9-203ENST00000406072 SLC52A2Q9HAB3 445 aa6.74□□□□□ -1.33
HDAC9-203ENST00000406072 USP16Q9Y5T5 823 aa6.74□□□□□ -1.33
HDAC9-203ENST00000406072 MRVI1Q9Y6F6 885 aa6.74□□□□□ -1.33
HDAC9-203ENST00000406072 ANKRD65E5RJM6 399 aa6.74□□□□□ -1.33
HDAC9-203ENST00000406072 ATP2B1P20020 1258 aa6.74□□□□□ -1.33
HDAC9-203ENST00000406072 SYT1P21579 422 aa6.74□□□□□ -1.33
HDAC9-203ENST00000406072 ANKRD1Q15327 319 aa6.74□□□□□ -1.33
HDAC9-203ENST00000406072 ANKRD18AQ8IVF6 992 aa6.74□□□□□ -1.33
HDAC9-203ENST00000406072 RPAP2Q8IXW5 612 aaPredicted RBP6.74□□□□□ -1.33
HDAC9-203ENST00000406072 STK11IPQ8N1F8 1099 aa6.74□□□□□ -1.33
HDAC9-203ENST00000406072 DDX17Q92841 729 aaKnown RBP6.74□□□□□ -1.33
HDAC9-203ENST00000406072 EXOC6BQ9Y2D4 811 aa6.74□□□□□ -1.33
HDAC9-203ENST00000406072 DHX16O60231 1041 aaKnown RBP6.74□□□□□ -1.33
HDAC9-203ENST00000406072 ARID4AP29374 1257 aaPredicted RBP6.74□□□□□ -1.33
HDAC9-203ENST00000406072 CNKSR2Q8WXI2 1034 aa6.74□□□□□ -1.33
HDAC9-203ENST00000406072 PDLIM2Q96JY6 352 aa6.74□□□□□ -1.33
HDAC9-203ENST00000406072 BRWD3Q6RI45 1802 aa6.74□□□□□ -1.33
HDAC9-203ENST00000406072 CTAGE15A4D2H0 777 aa6.74□□□□□ -1.33
HDAC9-203ENST00000406072 SRGAP3O43295 1099 aa6.74□□□□□ -1.33
HDAC9-203ENST00000406072 CTAGE8P0CG41 777 aa6.74□□□□□ -1.33
HDAC9-203ENST00000406072 SDSP20132 328 aa6.74□□□□□ -1.33
HDAC9-203ENST00000406072 EIF5P55010 431 aaKnown RBP6.74□□□□□ -1.33
HDAC9-203ENST00000406072 EIF4A1P60842 406 aaKnown RBP6.74□□□□□ -1.33
HDAC9-203ENST00000406072 TTC22Q5TAA0 569 aa6.74□□□□□ -1.33
HDAC9-203ENST00000406072 ZSCAN25Q6NSZ9 544 aa6.74□□□□□ -1.33
HDAC9-203ENST00000406072 CTAGE6Q86UF2 777 aa6.74□□□□□ -1.33
HDAC9-203ENST00000406072 CTAGE4Q8IX94 777 aa6.74□□□□□ -1.33
HDAC9-203ENST00000406072 CEP89Q96ST8 783 aa6.74□□□□□ -1.33
HDAC9-203ENST00000406072 IL1RAPL2Q9NP60 686 aa6.74□□□□□ -1.33
HDAC9-203ENST00000406072 FEZ2Q9UHY8 353 aaPredicted RBP6.74□□□□□ -1.33
HDAC9-203ENST00000406072 DDX60Q8IY21 1712 aaKnown RBP6.73□□□□□ -1.33
HDAC9-203ENST00000406072 KIF4AO95239 1232 aa6.73□□□□□ -1.33
HDAC9-203ENST00000406072 F13A1P00488 732 aa6.73□□□□□ -1.33
HDAC9-203ENST00000406072 ACTN2P35609 894 aa6.73□□□□□ -1.33
HDAC9-203ENST00000406072 ZNF75DP51815 510 aa6.73□□□□□ -1.33
HDAC9-203ENST00000406072 BIRC2Q13490 618 aa6.73□□□□□ -1.33
HDAC9-203ENST00000406072 FBXO38Q6PIJ6 1188 aa6.73□□□□□ -1.33
HDAC9-203ENST00000406072 POTEDQ86YR6 584 aa6.73□□□□□ -1.33
HDAC9-203ENST00000406072 UNC5CLQ8IV45 518 aa6.73□□□□□ -1.33
HDAC9-203ENST00000406072 CLASRPQ8N2M8 674 aaKnown RBP6.73□□□□□ -1.33
HDAC9-203ENST00000406072 AOPEPQ8N6M6 819 aa6.73□□□□□ -1.33
HDAC9-203ENST00000406072 VEZTQ9HBM0 779 aa6.73□□□□□ -1.33
HDAC9-203ENST00000406072 PRDM11Q9NQV5 511 aa6.73□□□□□ -1.33
HDAC9-203ENST00000406072 ZNHIT6Q9NWK9 470 aaKnown RBP6.73□□□□□ -1.33
HDAC9-203ENST00000406072 CASZ1Q86V15 1759 aa6.73□□□□□ -1.33
HDAC9-203ENST00000406072 ENOX2Q16206 610 aaKnown RBP6.73□□□□□ -1.33
HDAC9-203ENST00000406072 FSIP1Q8NA03 581 aa6.73□□□□□ -1.33
HDAC9-203ENST00000406072 AFDNP55196 1824 aaKnown RBP6.73□□□□□ -1.33
HDAC9-203ENST00000406072 NDUFAB1O14561 156 aa6.73□□□□□ -1.33
HDAC9-203ENST00000406072 TRIM66O15016 1216 aa6.73□□□□□ -1.33
HDAC9-203ENST00000406072 MCTP2Q6DN12 878 aa6.73□□□□□ -1.33
HDAC9-203ENST00000406072 CCDC121Q6ZUS5 278 aa6.73□□□□□ -1.33
HDAC9-203ENST00000406072 AFAP1L1Q8TED9 768 aa6.73□□□□□ -1.33
HDAC9-203ENST00000406072 RAPGEF4Q8WZA2 1011 aa6.73□□□□□ -1.33
HDAC9-203ENST00000406072 FSD1Q9BTV5 496 aa6.73□□□□□ -1.33
HDAC9-203ENST00000406072 SIL1Q9H173 461 aa6.73□□□□□ -1.33
HDAC9-203ENST00000406072 SH2B1Q9NRF2 756 aaPredicted RBP6.73□□□□□ -1.33
HDAC9-203ENST00000406072 HYPKQ9NX55 129 aa6.73□□□□□ -1.33
HDAC9-203ENST00000406072 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.73□□□□□ -1.33
HDAC9-203ENST00000406072 GOLGA6L10A0A0M3HER8 536 aa6.72□□□□□ -1.33
HDAC9-203ENST00000406072 TMCO5BA8MYB1 307 aa6.72□□□□□ -1.33
HDAC9-203ENST00000406072 GNAI2P04899 355 aa6.72□□□□□ -1.33
HDAC9-203ENST00000406072 GNAI3P08754 354 aa6.72□□□□□ -1.33
HDAC9-203ENST00000406072 UBTFL1P0CB47 393 aaPredicted RBP6.72□□□□□ -1.33
HDAC9-203ENST00000406072 ZRSR2Q15696 482 aaKnown RBP6.72□□□□□ -1.33
HDAC9-203ENST00000406072 HSP90AB4PQ58FF6 505 aa6.72□□□□□ -1.33
HDAC9-203ENST00000406072 NUTM2GQ5VZR2 741 aa6.72□□□□□ -1.33
HDAC9-203ENST00000406072 CEP112Q8N8E3 955 aa6.72□□□□□ -1.33
HDAC9-203ENST00000406072 JMYQ8N9B5 988 aa6.72□□□□□ -1.33
HDAC9-203ENST00000406072 FAM76AQ8TAV0 307 aa6.72□□□□□ -1.33
HDAC9-203ENST00000406072 FAM212AQ96EL1 285 aa6.72□□□□□ -1.33
HDAC9-203ENST00000406072 UTP14AQ9BVJ6 771 aaKnown RBP6.72□□□□□ -1.33
HDAC9-203ENST00000406072 USP26Q9BXU7 913 aa6.72□□□□□ -1.33
HDAC9-203ENST00000406072 MORC2Q9Y6X9 1032 aaPredicted RBP6.72□□□□□ -1.33
HDAC9-203ENST00000406072 ARAP2Q8WZ64 1704 aa6.72□□□□□ -1.33
HDAC9-203ENST00000406072 CYP27B1O15528 508 aa6.72□□□□□ -1.33
HDAC9-203ENST00000406072 HMGB2P26583 209 aaKnown RBP6.72□□□□□ -1.33
HDAC9-203ENST00000406072 UBASH3AP57075 661 aa6.72□□□□□ -1.33
HDAC9-203ENST00000406072 SYCP1Q15431 976 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms