RNA–Protein interactions for RNA: ENST00000405506.2

XRCC6-204, Transcript of X-ray repair cross complementing 6, humanhuman

TSL 5 BASIC

Gene XRCC6, Length 1,958 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC6-204ENST00000405506 NAP1L5Q96NT1 182 aaPredicted RBP12.36□□□□□ -0.43
XRCC6-204ENST00000405506 SETDB2Q96T68 719 aa12.36□□□□□ -0.43
XRCC6-204ENST00000405506 SEC62Q99442 399 aaKnown RBP12.36□□□□□ -0.43
XRCC6-204ENST00000405506 TPM2P07951 284 aa12.36□□□□□ -0.43
XRCC6-204ENST00000405506 PDCP20941 246 aa12.36□□□□□ -0.43
XRCC6-204ENST00000405506 RFC4P35249 363 aa12.36□□□□□ -0.43
XRCC6-204ENST00000405506 KRT32Q14532 448 aa12.36□□□□□ -0.43
XRCC6-204ENST00000405506 SF3B3Q15393 1217 aaKnown RBP12.36□□□□□ -0.43
XRCC6-204ENST00000405506 TTC39AQ5SRH9 613 aa12.36□□□□□ -0.43
XRCC6-204ENST00000405506 CCDC129Q6ZRS4 1044 aa12.36□□□□□ -0.43
XRCC6-204ENST00000405506 RGS17Q9UGC6 210 aaPredicted RBP12.36□□□□□ -0.43
XRCC6-204ENST00000405506 ELP1O95163 1332 aa12.36□□□□□ -0.43
XRCC6-204ENST00000405506 MROH5Q6ZUA9 1318 aa12.36□□□□□ -0.43
XRCC6-204ENST00000405506 TNS1Q9HBL0 1735 aaKnown RBP12.35□□□□□ -0.43
XRCC6-204ENST00000405506 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.35□□□□□ -0.43
XRCC6-204ENST00000405506 TOB2Q14106 344 aaPredicted RBP12.35□□□□□ -0.43
XRCC6-204ENST00000405506 SLC27A3Q5K4L6 730 aa12.35□□□□□ -0.43
XRCC6-204ENST00000405506 GORABQ5T7V8 394 aa12.35□□□□□ -0.43
XRCC6-204ENST00000405506 BLOC1S2Q6QNY1 142 aa12.35□□□□□ -0.43
XRCC6-204ENST00000405506 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.35□□□□□ -0.43
XRCC6-204ENST00000405506 LARP6Q9BRS8 491 aaKnown RBP12.35□□□□□ -0.43
XRCC6-204ENST00000405506 MCAMP43121 646 aa12.34□□□□□ -0.43
XRCC6-204ENST00000405506 ZAP70P43403 619 aa12.34□□□□□ -0.43
XRCC6-204ENST00000405506 PHKA1P46020 1223 aa12.34□□□□□ -0.43
XRCC6-204ENST00000405506 NFIXQ14938 502 aa12.34□□□□□ -0.43
XRCC6-204ENST00000405506 TXNRD1Q16881 649 aa12.34□□□□□ -0.43
XRCC6-204ENST00000405506 CCDC158Q5M9N0 1113 aa12.34□□□□□ -0.43
XRCC6-204ENST00000405506 NBPF5PQ86XG9 351 aaPredicted RBP12.34□□□□□ -0.43
XRCC6-204ENST00000405506 MPHOSPH8Q99549 860 aa12.34□□□□□ -0.43
XRCC6-204ENST00000405506 HSP90B1P14625 803 aaKnown RBP12.34□□□□□ -0.43
XRCC6-204ENST00000405506 FKBP4Q02790 459 aaKnown RBP eCLIP12.34□□□□□ -0.43
XRCC6-204ENST00000405506 DOCK2Q92608 1830 aa12.33□□□□□ -0.44
XRCC6-204ENST00000405506 WTIPA6NIX2 430 aaPredicted RBP12.33□□□□□ -0.44
XRCC6-204ENST00000405506 GTF2E1P29083 439 aaPredicted RBP12.33□□□□□ -0.44
XRCC6-204ENST00000405506 IGHMBP2P38935 993 aaKnown RBP12.33□□□□□ -0.44
XRCC6-204ENST00000405506 KCNJ4P48050 445 aa12.33□□□□□ -0.44
XRCC6-204ENST00000405506 DNM1Q05193 864 aaKnown RBP12.33□□□□□ -0.44
XRCC6-204ENST00000405506 CHRNDQ07001 517 aa12.33□□□□□ -0.44
XRCC6-204ENST00000405506 COL9A3Q14050 684 aaPredicted RBP12.33□□□□□ -0.44
XRCC6-204ENST00000405506 PUM3Q15397 648 aaKnown RBP12.33□□□□□ -0.44
XRCC6-204ENST00000405506 CELF1Q92879 486 aaKnown RBP12.33□□□□□ -0.44
XRCC6-204ENST00000405506 NYXQ9GZU5 481 aa12.33□□□□□ -0.44
XRCC6-204ENST00000405506 TAF6LQ9Y6J9 622 aa12.33□□□□□ -0.44
XRCC6-204ENST00000405506 GYS1P13807 737 aa12.32□□□□□ -0.44
XRCC6-204ENST00000405506 ADRA2BP18089 450 aa12.32□□□□□ -0.44
XRCC6-204ENST00000405506 RXRBP28702 533 aa12.32□□□□□ -0.44
XRCC6-204ENST00000405506 LARP1BQ659C4 914 aaKnown RBP12.32□□□□□ -0.44
XRCC6-204ENST00000405506 CCDC102BQ68D86 513 aa12.32□□□□□ -0.44
XRCC6-204ENST00000405506 NECAB1Q8N987 351 aa12.32□□□□□ -0.44
XRCC6-204ENST00000405506 RNF214Q8ND24 703 aa12.32□□□□□ -0.44
XRCC6-204ENST00000405506 LPIN2Q92539 896 aa12.32□□□□□ -0.44
XRCC6-204ENST00000405506 U3KPZ7 1027 aaPredicted RBP12.32□□□□□ -0.44
XRCC6-204ENST00000405506 FOXD4L6Q3SYB3 417 aaPredicted RBP12.32□□□□□ -0.44
XRCC6-204ENST00000405506 ZMYM1Q5SVZ6 1142 aa12.32□□□□□ -0.44
XRCC6-204ENST00000405506 POTEAQ6S8J7 498 aa12.32□□□□□ -0.44
XRCC6-204ENST00000405506 FOXD4L3Q6VB84 417 aaPredicted RBP12.32□□□□□ -0.44
XRCC6-204ENST00000405506 ZNF512BQ96KM6 892 aaPredicted RBP12.32□□□□□ -0.44
XRCC6-204ENST00000405506 LAMA4Q16363 1823 aa12.31□□□□□ -0.44
XRCC6-204ENST00000405506 RNF113AO15541 343 aaKnown RBP12.31□□□□□ -0.44
XRCC6-204ENST00000405506 ARID4AP29374 1257 aaPredicted RBP12.31□□□□□ -0.44
XRCC6-204ENST00000405506 TM4SF1P30408 202 aa12.31□□□□□ -0.44
XRCC6-204ENST00000405506 ZNF827Q17R98 1081 aa12.31□□□□□ -0.44
XRCC6-204ENST00000405506 MCMDC2Q4G0Z9 681 aa12.31□□□□□ -0.44
XRCC6-204ENST00000405506 TPTE2Q6XPS3 522 aa12.31□□□□□ -0.44
XRCC6-204ENST00000405506 SLC51AQ86UW1 340 aa12.31□□□□□ -0.44
XRCC6-204ENST00000405506 ANKRD18AQ8IVF6 992 aa12.31□□□□□ -0.44
XRCC6-204ENST00000405506 CDC5LQ99459 802 aaKnown RBP12.31□□□□□ -0.44
XRCC6-204ENST00000405506 CARMIL3Q8ND23 1372 aa12.31□□□□□ -0.44
XRCC6-204ENST00000405506 MAST3O60307 1309 aa12.31□□□□□ -0.44
XRCC6-204ENST00000405506 M0R2C6 588 aa12.3□□□□□ -0.44
XRCC6-204ENST00000405506 FIBPO43427 364 aa12.3□□□□□ -0.44
XRCC6-204ENST00000405506 SLC5A1P13866 664 aa12.3□□□□□ -0.44
XRCC6-204ENST00000405506 TTC6Q86TZ1 520 aa12.3□□□□□ -0.44
XRCC6-204ENST00000405506 NLRP3Q96P20 1036 aa12.3□□□□□ -0.44
XRCC6-204ENST00000405506 NEK1Q96PY6 1258 aa12.3□□□□□ -0.44
XRCC6-204ENST00000405506 AGXT2Q9BYV1 514 aa12.3□□□□□ -0.44
XRCC6-204ENST00000405506 PIH1D3Q9NQM4 214 aaKnown RBP12.3□□□□□ -0.44
XRCC6-204ENST00000405506 HELLSQ9NRZ9 838 aa12.3□□□□□ -0.44
XRCC6-204ENST00000405506 APBA3O96018 575 aa12.3□□□□□ -0.44
XRCC6-204ENST00000405506 KRT85P78386 507 aa12.3□□□□□ -0.44
XRCC6-204ENST00000405506 GTF3C6Q969F1 213 aa12.3□□□□□ -0.44
XRCC6-204ENST00000405506 OSBP2Q969R2 916 aa12.3□□□□□ -0.44
XRCC6-204ENST00000405506 BSDC1Q9NW68 430 aaPredicted RBP12.3□□□□□ -0.44
XRCC6-204ENST00000405506 MINPP1Q9UNW1 487 aa12.3□□□□□ -0.44
XRCC6-204ENST00000405506 PLSCR1O15162 318 aa12.29□□□□□ -0.44
XRCC6-204ENST00000405506 KDM4AO75164 1064 aa12.29□□□□□ -0.44
XRCC6-204ENST00000405506 RBM43Q6ZSC3 357 aaKnown RBP12.29□□□□□ -0.44
XRCC6-204ENST00000405506 SMARCC2Q8TAQ2 1214 aa12.29□□□□□ -0.44
XRCC6-204ENST00000405506 LLPHQ9BRT6 129 aaKnown RBP12.29□□□□□ -0.44
XRCC6-204ENST00000405506 DSCC1Q9BVC3 393 aa12.29□□□□□ -0.44
XRCC6-204ENST00000405506 SCAND2PQ9GZW5 306 aaPredicted RBP12.29□□□□□ -0.44
XRCC6-204ENST00000405506 HMGB1P09429 215 aaKnown RBP12.29□□□□□ -0.44
XRCC6-204ENST00000405506 BCAMP50895 628 aa12.29□□□□□ -0.44
XRCC6-204ENST00000405506 DDR1Q08345 913 aa12.29□□□□□ -0.44
XRCC6-204ENST00000405506 RASGRF1Q13972 1273 aa12.29□□□□□ -0.44
XRCC6-204ENST00000405506 PRR5LQ6MZQ0 368 aa12.29□□□□□ -0.44
XRCC6-204ENST00000405506 CDC37L1Q7L3B6 337 aa12.29□□□□□ -0.44
XRCC6-204ENST00000405506 FBXL16Q8N461 479 aa12.29□□□□□ -0.44
XRCC6-204ENST00000405506 ANKRD31Q8N7Z5 1873 aa12.28□□□□□ -0.44
XRCC6-204ENST00000405506 RGPD3A6NKT7 1758 aaPredicted RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 273.6 ms