RNA–Protein interactions for RNA: ENST00000400060.8

PTPRM-203, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5 BASIC

Gene PTPRM, Length 5,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-203ENST00000400060 ADGRL2O95490 1459 aa11.3□□□□□ -0.6
PTPRM-203ENST00000400060 MAP7Q14244 749 aa11.29□□□□□ -0.6
PTPRM-203ENST00000400060 VIPAS39Q9H9C1 493 aa11.29□□□□□ -0.6
PTPRM-203ENST00000400060 MMP14P50281 582 aa11.29□□□□□ -0.6
PTPRM-203ENST00000400060 MTMR3Q13615 1198 aa11.29□□□□□ -0.6
PTPRM-203ENST00000400060 BICC1Q9H694 974 aaKnown RBP11.29□□□□□ -0.6
PTPRM-203ENST00000400060 FAM169AQ9Y6X4 670 aa11.29□□□□□ -0.6
PTPRM-203ENST00000400060 FGFR1OPO95684 399 aaKnown RBP11.29□□□□□ -0.6
PTPRM-203ENST00000400060 KARSQ15046 597 aaKnown RBP11.29□□□□□ -0.6
PTPRM-203ENST00000400060 PLCB4Q15147 1175 aa11.29□□□□□ -0.6
PTPRM-203ENST00000400060 CYP26C1Q6V0L0 522 aa11.29□□□□□ -0.6
PTPRM-203ENST00000400060 SPINK5Q9NQ38 1064 aaPredicted RBP11.29□□□□□ -0.6
PTPRM-203ENST00000400060 POLKQ9UBT6 870 aa11.29□□□□□ -0.6
PTPRM-203ENST00000400060 CCDC57Q2TAC2 916 aa11.29□□□□□ -0.6
PTPRM-203ENST00000400060 RUBCNQ92622 972 aa11.29□□□□□ -0.6
PTPRM-203ENST00000400060 LRRC45Q96CN5 670 aa11.29□□□□□ -0.6
PTPRM-203ENST00000400060 CREB3O43889 395 aa11.28□□□□□ -0.6
PTPRM-203ENST00000400060 KIF4AO95239 1232 aa11.28□□□□□ -0.6
PTPRM-203ENST00000400060 EPS15P42566 896 aa11.28□□□□□ -0.6
PTPRM-203ENST00000400060 PAK2Q13177 524 aa11.28□□□□□ -0.6
PTPRM-203ENST00000400060 SEPT2Q15019 361 aa11.28□□□□□ -0.6
PTPRM-203ENST00000400060 SEPT7Q16181 437 aaKnown RBP11.28□□□□□ -0.6
PTPRM-203ENST00000400060 OSBPL5Q9H0X9 879 aaPredicted RBP11.28□□□□□ -0.6
PTPRM-203ENST00000400060 TSKSQ9UJT2 592 aa11.28□□□□□ -0.6
PTPRM-203ENST00000400060 RTEL1-TNFRSF6BF6WH68 1400 aa11.28□□□□□ -0.6
PTPRM-203ENST00000400060 VIRMAQ69YN4 1812 aaKnown RBP11.28□□□□□ -0.6
PTPRM-203ENST00000400060 CFAP74Q9C0B2 1584 aa11.28□□□□□ -0.6
PTPRM-203ENST00000400060 HLTFQ14527 1009 aaKnown RBP eCLIP11.28□□□□□ -0.68e-7■■■□□ 17
PTPRM-203ENST00000400060 WASHC4Q2M389 1173 aa11.28□□□□□ -0.6
PTPRM-203ENST00000400060 HSP90AB2PQ58FF8 381 aa11.28□□□□□ -0.6
PTPRM-203ENST00000400060 EXOC6BQ9Y2D4 811 aa11.28□□□□□ -0.6
PTPRM-203ENST00000400060 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.28□□□□□ -0.6
PTPRM-203ENST00000400060 TRAPPC8Q9Y2L5 1435 aa11.28□□□□□ -0.6
PTPRM-203ENST00000400060 FLOT1O75955 427 aa11.28□□□□□ -0.6
PTPRM-203ENST00000400060 H2AFXP16104 143 aaPredicted RBP11.28□□□□□ -0.6
PTPRM-203ENST00000400060 PRPHP41219 470 aa11.28□□□□□ -0.6
PTPRM-203ENST00000400060 TNNC1P63316 161 aa11.28□□□□□ -0.6
PTPRM-203ENST00000400060 RMND1Q9NWS8 449 aa11.28□□□□□ -0.6
PTPRM-203ENST00000400060 ATP10BO94823 1461 aa11.28□□□□□ -0.6
PTPRM-203ENST00000400060 SMIM24O75264 130 aa11.27□□□□□ -0.6
PTPRM-203ENST00000400060 PKP1Q13835 747 aa11.27□□□□□ -0.6
PTPRM-203ENST00000400060 CCDC174Q6PII3 467 aa11.27□□□□□ -0.6
PTPRM-203ENST00000400060 OSBPL9Q96SU4 736 aa11.27□□□□□ -0.6
PTPRM-203ENST00000400060 WDR62O43379 1518 aa11.27□□□□□ -0.6
PTPRM-203ENST00000400060 PLEKHG2Q9H7P9 1386 aa11.27□□□□□ -0.6
PTPRM-203ENST00000400060 TRIM66O15016 1216 aa11.27□□□□□ -0.61
PTPRM-203ENST00000400060 LMOD1P29536 600 aaPredicted RBP11.27□□□□□ -0.61
PTPRM-203ENST00000400060 AIMP1Q12904 312 aaKnown RBP11.27□□□□□ -0.61
PTPRM-203ENST00000400060 NBPF14Q5TI25 921 aa11.27□□□□□ -0.61
PTPRM-203ENST00000400060 ALS2CLQ60I27 953 aa11.27□□□□□ -0.61
PTPRM-203ENST00000400060 NAA16Q6N069 864 aaPredicted RBP11.27□□□□□ -0.61
PTPRM-203ENST00000400060 CEP128Q6ZU80 1094 aa11.27□□□□□ -0.61
PTPRM-203ENST00000400060 LZTFL1Q9NQ48 299 aa11.27□□□□□ -0.61
PTPRM-203ENST00000400060 NLRP1Q9C000 1473 aa11.27□□□□□ -0.61
PTPRM-203ENST00000400060 NLRP6P59044 892 aa11.27□□□□□ -0.61
PTPRM-203ENST00000400060 CEP85Q6P2H3 762 aa11.27□□□□□ -0.61
PTPRM-203ENST00000400060 DAAM2Q86T65 1068 aa11.27□□□□□ -0.61
PTPRM-203ENST00000400060 TTC5Q8N0Z6 440 aa11.27□□□□□ -0.61
PTPRM-203ENST00000400060 NECTIN2Q92692 538 aa11.27□□□□□ -0.61
PTPRM-203ENST00000400060 TSC22D3Q99576 134 aa11.27□□□□□ -0.61
PTPRM-203ENST00000400060 KCNF1Q9H3M0 494 aa11.27□□□□□ -0.61
PTPRM-203ENST00000400060 SSBP05455 408 aaKnown RBP eCLIP11.27□□□□□ -0.61
PTPRM-203ENST00000400060 XPO4Q9C0E2 1151 aaKnown RBP11.27□□□□□ -0.61
PTPRM-203ENST00000400060 TNNQ9UQP3 1299 aa11.27□□□□□ -0.61
PTPRM-203ENST00000400060 BIN1O00499 593 aa11.26□□□□□ -0.61
PTPRM-203ENST00000400060 IKBKBO14920 756 aa11.26□□□□□ -0.61
PTPRM-203ENST00000400060 SGSM2O43147 1006 aa11.26□□□□□ -0.61
PTPRM-203ENST00000400060 CASP8Q14790 479 aa11.26□□□□□ -0.61
PTPRM-203ENST00000400060 SETDB1Q15047 1291 aa11.26□□□□□ -0.61
PTPRM-203ENST00000400060 DDX46Q7L014 1031 aaKnown RBP11.26□□□□□ -0.61
PTPRM-203ENST00000400060 CNKSR2Q8WXI2 1034 aa11.26□□□□□ -0.61
PTPRM-203ENST00000400060 IQCDQ96DY2 449 aa11.26□□□□□ -0.61
PTPRM-203ENST00000400060 PLCB1Q9NQ66 1216 aa11.26□□□□□ -0.61
PTPRM-203ENST00000400060 ATP2C2O75185 946 aa11.26□□□□□ -0.61
PTPRM-203ENST00000400060 CD2BP2O95400 341 aaKnown RBP11.26□□□□□ -0.61
PTPRM-203ENST00000400060 KIF5AQ12840 1032 aa11.26□□□□□ -0.61
PTPRM-203ENST00000400060 RNF10Q8N5U6 811 aaKnown RBP11.26□□□□□ -0.61
PTPRM-203ENST00000400060 BAIAP2L1Q9UHR4 511 aa11.26□□□□□ -0.61
PTPRM-203ENST00000400060 PEX19P40855 299 aa11.26□□□□□ -0.61
PTPRM-203ENST00000400060 ADGRF5Q8IZF2 1346 aa11.26□□□□□ -0.61
PTPRM-203ENST00000400060 GBP5Q96PP8 586 aa11.26□□□□□ -0.61
PTPRM-203ENST00000400060 NEK1Q96PY6 1258 aa11.26□□□□□ -0.61
PTPRM-203ENST00000400060 KDM5AP29375 1690 aaKnown RBP11.26□□□□□ -0.61
PTPRM-203ENST00000400060 ARHGAP31Q2M1Z3 1444 aa11.26□□□□□ -0.61
PTPRM-203ENST00000400060 SPTLC2O15270 562 aa11.26□□□□□ -0.61
PTPRM-203ENST00000400060 BMP15O95972 392 aa11.26□□□□□ -0.61
PTPRM-203ENST00000400060 GKAP1Q5VSY0 366 aaPredicted RBP11.26□□□□□ -0.61
PTPRM-203ENST00000400060 NBPF10Q6P3W6 841 aaKnown RBP11.26□□□□□ -0.61
PTPRM-203ENST00000400060 SELENOOQ9BVL4 669 aa11.26□□□□□ -0.61
PTPRM-203ENST00000400060 KDM5BQ9UGL1 1544 aa11.25□□□□□ -0.61
PTPRM-203ENST00000400060 MAP4K4O95819 1239 aaPredicted RBP11.25□□□□□ -0.61
PTPRM-203ENST00000400060 ATP5DP30049 168 aa11.25□□□□□ -0.61
PTPRM-203ENST00000400060 NOP2P46087 812 aaKnown RBP11.25□□□□□ -0.61
PTPRM-203ENST00000400060 NOP53Q9NZM5 478 aaKnown RBP11.25□□□□□ -0.61
PTPRM-203ENST00000400060 STIM2Q9P246 746 aa11.25□□□□□ -0.61
PTPRM-203ENST00000400060 SULT6B1Q6IMI4 303 aa11.25□□□□□ -0.61
PTPRM-203ENST00000400060 HOOK3Q86VS8 718 aa11.25□□□□□ -0.61
PTPRM-203ENST00000400060 ECHDC1Q9NTX5 307 aa11.25□□□□□ -0.61
PTPRM-203ENST00000400060 IRAK4Q9NWZ3 460 aa11.25□□□□□ -0.61
PTPRM-203ENST00000400060 MTMR6Q9Y217 621 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 134.9 ms