RNA–Protein interactions for RNA: ENST00000398495.6

MBD1-209, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 5 BASIC

Gene MBD1, Length 2,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-209ENST00000398495 PDE6AP16499 860 aa18.11■□□□□ 0.49
MBD1-209ENST00000398495 CHRNDQ07001 517 aa18.11■□□□□ 0.49
MBD1-209ENST00000398495 RC3H1Q5TC82 1133 aaKnown RBP18.11■□□□□ 0.49
MBD1-209ENST00000398495 MEX3CQ5U5Q3 659 aaKnown RBP18.11■□□□□ 0.49
MBD1-209ENST00000398495 LARP1BQ659C4 914 aaKnown RBP18.11■□□□□ 0.49
MBD1-209ENST00000398495 SPATA5Q8NB90 893 aa18.11■□□□□ 0.49
MBD1-209ENST00000398495 CTNNA3Q9UI47 895 aa18.11■□□□□ 0.49
MBD1-209ENST00000398495 JAK2O60674 1132 aa18.1■□□□□ 0.49
MBD1-209ENST00000398495 RPS6KA4O75676 772 aa18.1■□□□□ 0.49
MBD1-209ENST00000398495 FGAP02671 866 aa18.1■□□□□ 0.49
MBD1-209ENST00000398495 FGD1P98174 961 aa18.1■□□□□ 0.49
MBD1-209ENST00000398495 APOBRQ0VD83 1088 aa18.1■□□□□ 0.49
MBD1-209ENST00000398495 CCNL1Q9UK58 526 aaPredicted RBP18.1■□□□□ 0.49
MBD1-209ENST00000398495 ZNF532Q9HCE3 1301 aa18.1■□□□□ 0.49
MBD1-209ENST00000398495 TCRBV5S4A2TA0A5A2 114 aa18.1■□□□□ 0.49
MBD1-209ENST00000398495 GNPATO15228 680 aa18.1■□□□□ 0.49
MBD1-209ENST00000398495 CDC37L1Q7L3B6 337 aa18.1■□□□□ 0.49
MBD1-209ENST00000398495 CHST3Q7LGC8 479 aa18.1■□□□□ 0.49
MBD1-209ENST00000398495 C4AP0C0L4 1744 aa18.09■□□□□ 0.49
MBD1-209ENST00000398495 C4BP0C0L5 1744 aa18.09■□□□□ 0.49
MBD1-209ENST00000398495 SCRN1Q12765 414 aa18.09■□□□□ 0.49
MBD1-209ENST00000398495 UBE3CQ15386 1083 aa18.09■□□□□ 0.49
MBD1-209ENST00000398495 IMMTQ16891 758 aaKnown RBP18.09■□□□□ 0.49
MBD1-209ENST00000398495 AMIGO3Q86WK7 504 aa18.09■□□□□ 0.49
MBD1-209ENST00000398495 CDC5LQ99459 802 aaKnown RBP18.09■□□□□ 0.49
MBD1-209ENST00000398495 AGXT2Q9BYV1 514 aa18.09■□□□□ 0.49
MBD1-209ENST00000398495 NARFQ9UHQ1 456 aa18.09■□□□□ 0.49
MBD1-209ENST00000398495 AFF2P51816 1311 aa18.09■□□□□ 0.49
MBD1-209ENST00000398495 PFKFB2O60825 505 aa18.08■□□□□ 0.49
MBD1-209ENST00000398495 BCAMP50895 628 aa18.08■□□□□ 0.49
MBD1-209ENST00000398495 GJD4Q96KN9 370 aaPredicted RBP18.08■□□□□ 0.49
MBD1-209ENST00000398495 ATP6V1DQ9Y5K8 247 aa18.08■□□□□ 0.49
MBD1-209ENST00000398495 RGL2O15211 777 aa18.08■□□□□ 0.48
MBD1-209ENST00000398495 DNM1Q05193 864 aaKnown RBP18.08■□□□□ 0.48
MBD1-209ENST00000398495 SF3B3Q15393 1217 aaKnown RBP18.08■□□□□ 0.48
MBD1-209ENST00000398495 FIBPO43427 364 aa18.07■□□□□ 0.48
MBD1-209ENST00000398495 PDCP20941 246 aa18.07■□□□□ 0.48
MBD1-209ENST00000398495 HSPA1LP34931 641 aa18.07■□□□□ 0.48
MBD1-209ENST00000398495 FERMT3Q86UX7 667 aa18.07■□□□□ 0.48
MBD1-209ENST00000398495 ANKRD18AQ8IVF6 992 aa18.07■□□□□ 0.48
MBD1-209ENST00000398495 CERKQ8TCT0 537 aa18.06■□□□□ 0.48
MBD1-209ENST00000398495 NBPF3Q9H094 633 aa18.06■□□□□ 0.48
MBD1-209ENST00000398495 GPHNQ9NQX3 736 aaPredicted RBP18.06■□□□□ 0.48
MBD1-209ENST00000398495 MB21D2Q8IYB1 491 aaPredicted RBP18.06■□□□□ 0.48
MBD1-209ENST00000398495 WTIPA6NIX2 430 aaPredicted RBP18.05■□□□□ 0.48
MBD1-209ENST00000398495 GTF2E1P29083 439 aaPredicted RBP18.05■□□□□ 0.48
MBD1-209ENST00000398495 SLC10A5Q5PT55 438 aa18.05■□□□□ 0.48
MBD1-209ENST00000398495 MAGEB6Q8N7X4 407 aa18.05■□□□□ 0.48
MBD1-209ENST00000398495 NSUN7Q8NE18 718 aaKnown RBP18.05■□□□□ 0.48
MBD1-209ENST00000398495 SMARCC2Q8TAQ2 1214 aa18.05■□□□□ 0.48
MBD1-209ENST00000398495 DDX11Q96FC9 970 aa18.05■□□□□ 0.48
MBD1-209ENST00000398495 SYCE3A1L190 88 aa18.04■□□□□ 0.48
MBD1-209ENST00000398495 CTDNEP1O95476 244 aa18.04■□□□□ 0.48
MBD1-209ENST00000398495 ANTXR2P58335 489 aa18.04■□□□□ 0.48
MBD1-209ENST00000398495 RTCBQ9Y3I0 505 aaKnown RBP18.04■□□□□ 0.48
MBD1-209ENST00000398495 TNRC6CQ9HCJ0 1690 aaKnown RBP18.04■□□□□ 0.48
MBD1-209ENST00000398495 COL1A1P02452 1464 aaPredicted RBP18.04■□□□□ 0.48
MBD1-209ENST00000398495 ZNF213O14771 459 aa18.04■□□□□ 0.48
MBD1-209ENST00000398495 PRC1O43663 620 aa18.04■□□□□ 0.48
MBD1-209ENST00000398495 ZPR1O75312 459 aa18.04■□□□□ 0.48
MBD1-209ENST00000398495 CCT2P78371 535 aaKnown RBP18.04■□□□□ 0.48
MBD1-209ENST00000398495 TBC1D10CQ8IV04 446 aa18.04■□□□□ 0.48
MBD1-209ENST00000398495 CCDC24Q8N4L8 307 aa18.04■□□□□ 0.48
MBD1-209ENST00000398495 CELF1Q92879 486 aaKnown RBP18.04■□□□□ 0.48
MBD1-209ENST00000398495 STRBPQ96SI9 672 aaKnown RBP18.04■□□□□ 0.48
MBD1-209ENST00000398495 SETDB2Q96T68 719 aa18.04■□□□□ 0.48
MBD1-209ENST00000398495 NCOA5Q9HCD5 579 aaKnown RBP18.04■□□□□ 0.48
MBD1-209ENST00000398495 NAP1L2Q9ULW6 460 aaPredicted RBP18.04■□□□□ 0.48
MBD1-209ENST00000398495 PDIA4P13667 645 aaKnown RBP18.03■□□□□ 0.48
MBD1-209ENST00000398495 PDIA3P30101 505 aaKnown RBP18.03■□□□□ 0.48
MBD1-209ENST00000398495 MAP3K12Q12852 859 aa18.03■□□□□ 0.48
MBD1-209ENST00000398495 TPRNQ4KMQ1 711 aa18.03■□□□□ 0.48
MBD1-209ENST00000398495 FAM173BQ6P4H8 233 aa18.03■□□□□ 0.48
MBD1-209ENST00000398495 NBPF5PQ86XG9 351 aaPredicted RBP18.03■□□□□ 0.48
MBD1-209ENST00000398495 ARHGEF1Q92888 912 aaKnown RBP18.03■□□□□ 0.48
MBD1-209ENST00000398495 AIDAQ96BJ3 306 aa18.03■□□□□ 0.48
MBD1-209ENST00000398495 LLPHQ9BRT6 129 aaKnown RBP18.03■□□□□ 0.48
MBD1-209ENST00000398495 NYXQ9GZU5 481 aa18.03■□□□□ 0.48
MBD1-209ENST00000398495 BSDC1Q9NW68 430 aaPredicted RBP18.03■□□□□ 0.48
MBD1-209ENST00000398495 IQSEC3Q9UPP2 1182 aaPredicted RBP18.03■□□□□ 0.48
MBD1-209ENST00000398495 PTPDC1A2A3K4 754 aa18.03■□□□□ 0.48
MBD1-209ENST00000398495 MBD4O95243 580 aa18.03■□□□□ 0.48
MBD1-209ENST00000398495 SEPT12Q8IYM1 358 aa18.03■□□□□ 0.48
MBD1-209ENST00000398495 FBXL16Q8N461 479 aa18.03■□□□□ 0.48
MBD1-209ENST00000398495 ZNF274Q96GC6 653 aaPredicted RBP18.03■□□□□ 0.48
MBD1-209ENST00000398495 ZNF804BA4D1E1 1349 aa18.02■□□□□ 0.48
MBD1-209ENST00000398495 APPP05067 770 aa18.02■□□□□ 0.48
MBD1-209ENST00000398495 GYG1P46976 350 aa18.02■□□□□ 0.48
MBD1-209ENST00000398495 UBE2HP62256 183 aa18.02■□□□□ 0.48
MBD1-209ENST00000398495 LRSAM1Q6UWE0 723 aa18.02■□□□□ 0.48
MBD1-209ENST00000398495 NCOA7Q8NI08 942 aa18.02■□□□□ 0.48
MBD1-209ENST00000398495 NKX2-3Q8TAU0 364 aa18.02■□□□□ 0.48
MBD1-209ENST00000398495 EPB41L4AQ9HCS5 686 aaPredicted RBP18.02■□□□□ 0.48
MBD1-209ENST00000398495 DENND2AQ9ULE3 1009 aa18.02■□□□□ 0.48
MBD1-209ENST00000398495 MCM5P33992 734 aa18.01■□□□□ 0.47
MBD1-209ENST00000398495 RALYLQ86SE5 291 aaKnown RBP18.01■□□□□ 0.47
MBD1-209ENST00000398495 RBSNQ9H1K0 784 aa18.01■□□□□ 0.47
MBD1-209ENST00000398495 ARMT1Q9H993 441 aa18.01■□□□□ 0.47
MBD1-209ENST00000398495 MINPP1Q9UNW1 487 aa18.01■□□□□ 0.47
MBD1-209ENST00000398495 CHD4Q14839 1912 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 111.6 ms