RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 MBD4O95243 580 aa5.71□□□□□ -1.49
SMAD4-202ENST00000398417 FAM160A1Q05DH4 1040 aa5.71□□□□□ -1.49
SMAD4-202ENST00000398417 CCDC144BQ3MJ40 725 aa5.71□□□□□ -1.49
SMAD4-202ENST00000398417 PIK3R5Q8WYR1 880 aa5.71□□□□□ -1.49
SMAD4-202ENST00000398417 ZHX1Q9UKY1 873 aaPredicted RBP5.71□□□□□ -1.49
SMAD4-202ENST00000398417 CAMSAP1Q5T5Y3 1602 aa5.71□□□□□ -1.49
SMAD4-202ENST00000398417 CHMP4BP1P59074 171 aa5.71□□□□□ -1.49
SMAD4-202ENST00000398417 AIFM3Q96NN9 605 aa5.71□□□□□ -1.49
SMAD4-202ENST00000398417 SLC12A7Q9Y666 1083 aa5.71□□□□□ -1.49
SMAD4-202ENST00000398417 PES1O00541 588 aaKnown RBP5.71□□□□□ -1.5
SMAD4-202ENST00000398417 U2AF2P26368 475 aaKnown RBP eCLIP5.71□□□□□ -1.58e-7■■■□□ 17.4
SMAD4-202ENST00000398417 FOXO4P98177 505 aa5.71□□□□□ -1.5
SMAD4-202ENST00000398417 TDRD7Q8NHU6 1098 aaKnown RBP5.71□□□□□ -1.5
SMAD4-202ENST00000398417 KIAA1524Q8TCG1 905 aa5.71□□□□□ -1.5
SMAD4-202ENST00000398417 CLIC6Q96NY7 704 aa5.71□□□□□ -1.5
SMAD4-202ENST00000398417 LRP2BPQ9P2M1 347 aa5.71□□□□□ -1.5
SMAD4-202ENST00000398417 ABCF2Q9UG63 623 aa5.71□□□□□ -1.5
SMAD4-202ENST00000398417 TECPR2O15040 1411 aa5.71□□□□□ -1.5
SMAD4-202ENST00000398417 MYO3AQ8NEV4 1616 aa5.71□□□□□ -1.5
SMAD4-202ENST00000398417 ADGRB2O60241 1585 aa5.71□□□□□ -1.5
SMAD4-202ENST00000398417 TERF1P54274 439 aa5.71□□□□□ -1.5
SMAD4-202ENST00000398417 CFAP100Q494V2 611 aa5.71□□□□□ -1.5
SMAD4-202ENST00000398417 ATG9AQ7Z3C6 839 aa5.71□□□□□ -1.5
SMAD4-202ENST00000398417 MTERF4Q7Z6M4 381 aaKnown RBP5.71□□□□□ -1.5
SMAD4-202ENST00000398417 MPHOSPH8Q99549 860 aa5.71□□□□□ -1.5
SMAD4-202ENST00000398417 URI1O94763 535 aaPredicted RBP5.71□□□□□ -1.5
SMAD4-202ENST00000398417 NAA16Q6N069 864 aaPredicted RBP5.71□□□□□ -1.5
SMAD4-202ENST00000398417 KCNJ14Q9UNX9 436 aa5.71□□□□□ -1.5
SMAD4-202ENST00000398417 ANKARQ7Z5J8 1434 aa5.71□□□□□ -1.5
SMAD4-202ENST00000398417 UQCRFS1P1P0C7P4 283 aa5.71□□□□□ -1.5
SMAD4-202ENST00000398417 ADD1P35611 737 aaKnown RBP5.71□□□□□ -1.5
SMAD4-202ENST00000398417 DZIP3Q86Y13 1208 aaKnown RBP5.71□□□□□ -1.5
SMAD4-202ENST00000398417 CMTR1Q8N1G2 835 aaKnown RBP5.71□□□□□ -1.5
SMAD4-202ENST00000398417 ZBTB9Q96C00 473 aa5.71□□□□□ -1.5
SMAD4-202ENST00000398417 INCENPQ9NQS7 918 aa5.71□□□□□ -1.5
SMAD4-202ENST00000398417 NPHP4O75161 1426 aaPredicted RBP5.71□□□□□ -1.5
SMAD4-202ENST00000398417 SLC5A1P13866 664 aa5.7□□□□□ -1.5
SMAD4-202ENST00000398417 NAA30Q147X3 362 aaPredicted RBP5.7□□□□□ -1.5
SMAD4-202ENST00000398417 CNNM3Q8NE01 707 aa5.7□□□□□ -1.5
SMAD4-202ENST00000398417 NAPBQ9H115 298 aa5.7□□□□□ -1.5
SMAD4-202ENST00000398417 CCDC191Q8NCU4 936 aa5.7□□□□□ -1.5
SMAD4-202ENST00000398417 KCNB2Q92953 911 aa5.7□□□□□ -1.5
SMAD4-202ENST00000398417 GPAA1O43292 621 aa5.7□□□□□ -1.5
SMAD4-202ENST00000398417 ANO1Q5XXA6 986 aa5.7□□□□□ -1.5
SMAD4-202ENST00000398417 CACTINQ8WUQ7 758 aaKnown RBP5.7□□□□□ -1.5
SMAD4-202ENST00000398417 ASAP1Q9ULH1 1129 aa5.7□□□□□ -1.5
SMAD4-202ENST00000398417 PCDH11XQ9BZA7 1347 aa5.7□□□□□ -1.5
SMAD4-202ENST00000398417 PCDH11YQ9BZA8 1340 aa5.7□□□□□ -1.5
SMAD4-202ENST00000398417 USP27XA6NNY8 438 aa5.7□□□□□ -1.5
SMAD4-202ENST00000398417 CYP7A1P22680 504 aa5.7□□□□□ -1.5
SMAD4-202ENST00000398417 LMOD1P29536 600 aaPredicted RBP5.7□□□□□ -1.5
SMAD4-202ENST00000398417 SCARF1Q14162 830 aa5.7□□□□□ -1.5
SMAD4-202ENST00000398417 VPS37DQ86XT2 251 aa5.7□□□□□ -1.5
SMAD4-202ENST00000398417 CCDC94Q9BW85 323 aaPredicted RBP5.7□□□□□ -1.5
SMAD4-202ENST00000398417 NACAP1Q9BZK3 213 aa5.7□□□□□ -1.5
SMAD4-202ENST00000398417 SERTAD1Q9UHV2 236 aa5.7□□□□□ -1.5
SMAD4-202ENST00000398417 KIF28PB7ZC32 967 aa5.7□□□□□ -1.5
SMAD4-202ENST00000398417 ZBTB43O43298 467 aa5.7□□□□□ -1.5
SMAD4-202ENST00000398417 CBFA2T2O43439 604 aa5.7□□□□□ -1.5
SMAD4-202ENST00000398417 ZFYP08048 801 aaPredicted RBP5.7□□□□□ -1.5
SMAD4-202ENST00000398417 APPBP2Q92624 585 aa5.7□□□□□ -1.5
SMAD4-202ENST00000398417 PHKBQ93100 1093 aa5.7□□□□□ -1.5
SMAD4-202ENST00000398417 CDC42BPGQ6DT37 1551 aa5.7□□□□□ -1.5
SMAD4-202ENST00000398417 PFKFB1P16118 471 aa5.7□□□□□ -1.5
SMAD4-202ENST00000398417 IGHMBP2P38935 993 aaKnown RBP5.7□□□□□ -1.5
SMAD4-202ENST00000398417 UBAC1Q9BSL1 405 aa5.7□□□□□ -1.5
SMAD4-202ENST00000398417 CFAP65Q6ZU64 1925 aaKnown RBP5.7□□□□□ -1.5
SMAD4-202ENST00000398417 CFAP74Q9C0B2 1584 aa5.7□□□□□ -1.5
SMAD4-202ENST00000398417 TMEM94Q12767 1356 aa5.7□□□□□ -1.5
SMAD4-202ENST00000398417 MPHOSPH10O00566 681 aaKnown RBP5.7□□□□□ -1.5
SMAD4-202ENST00000398417 PRKAB2O43741 272 aa5.7□□□□□ -1.5
SMAD4-202ENST00000398417 RANBP6O60518 1105 aaKnown RBP5.7□□□□□ -1.5
SMAD4-202ENST00000398417 STX17P56962 302 aa5.7□□□□□ -1.5
SMAD4-202ENST00000398417 NLRP12P59046 1061 aa5.7□□□□□ -1.5
SMAD4-202ENST00000398417 SMARCC2Q8TAQ2 1214 aa5.7□□□□□ -1.5
SMAD4-202ENST00000398417 GREM2Q9H772 168 aa5.7□□□□□ -1.5
SMAD4-202ENST00000398417 GPR108Q9NPR9 543 aa5.7□□□□□ -1.5
SMAD4-202ENST00000398417 MAP10Q9P2G4 905 aa5.7□□□□□ -1.5
SMAD4-202ENST00000398417 MROH2AA6NES4 1674 aa5.69□□□□□ -1.5
SMAD4-202ENST00000398417 EXOC5O00471 708 aa5.69□□□□□ -1.5
SMAD4-202ENST00000398417 RAD21O60216 631 aa5.69□□□□□ -1.5
SMAD4-202ENST00000398417 ADAMTS2O95450 1211 aa5.69□□□□□ -1.5
SMAD4-202ENST00000398417 SYKP43405 635 aa5.69□□□□□ -1.5
SMAD4-202ENST00000398417 MAP3K12Q12852 859 aa5.69□□□□□ -1.5
SMAD4-202ENST00000398417 SART3Q15020 963 aaKnown RBP5.69□□□□□ -1.5
SMAD4-202ENST00000398417 MYSM1Q5VVJ2 828 aa5.69□□□□□ -1.5
SMAD4-202ENST00000398417 FUCA2Q9BTY2 467 aa5.69□□□□□ -1.5
SMAD4-202ENST00000398417 CDKL5O76039 1030 aa5.69□□□□□ -1.5
SMAD4-202ENST00000398417 FDPSP14324 419 aaKnown RBP5.69□□□□□ -1.5
SMAD4-202ENST00000398417 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.69□□□□□ -1.5
SMAD4-202ENST00000398417 MAGEB6Q8N7X4 407 aa5.69□□□□□ -1.5
SMAD4-202ENST00000398417 RCOR1Q9UKL0 485 aa5.69□□□□□ -1.5
SMAD4-202ENST00000398417 SNW1Q13573 536 aaKnown RBP5.69□□□□□ -1.5
SMAD4-202ENST00000398417 TRIM22Q8IYM9 498 aa5.69□□□□□ -1.5
SMAD4-202ENST00000398417 CCDC24Q8N4L8 307 aa5.69□□□□□ -1.5
SMAD4-202ENST00000398417 DHX58Q96C10 678 aa5.69□□□□□ -1.5
SMAD4-202ENST00000398417 WWC3Q9ULE0 1092 aa5.69□□□□□ -1.5
SMAD4-202ENST00000398417 ZNF532Q9HCE3 1301 aa5.69□□□□□ -1.5
SMAD4-202ENST00000398417 AGLP35573 1532 aa5.69□□□□□ -1.5
SMAD4-202ENST00000398417 SNAP23O00161 211 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms