RNA–Protein interactions for RNA: ENST00000396545.4

TNFSF13-205, Transcript of TNF superfamily member 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TNFSF13, Length 1,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-205ENST00000396545 COA1Q9GZY4 146 aa21.67■■□□□ 1.06
TNFSF13-205ENST00000396545 MXD3Q9BW11 206 aa21.66■■□□□ 1.06
TNFSF13-205ENST00000396545 SLC10A3P09131 477 aa21.65■■□□□ 1.06
TNFSF13-205ENST00000396545 KIF23Q02241 960 aaPredicted RBP21.65■■□□□ 1.06
TNFSF13-205ENST00000396545 STRIP1Q5VSL9 837 aa21.65■■□□□ 1.06
TNFSF13-205ENST00000396545 PAPPA2Q9BXP8 1791 aa21.65■■□□□ 1.06
TNFSF13-205ENST00000396545 ZNF804BA4D1E1 1349 aa21.65■■□□□ 1.06
TNFSF13-205ENST00000396545 MYO3BQ8WXR4 1341 aa21.65■■□□□ 1.06
TNFSF13-205ENST00000396545 KLRK1P26718 216 aa21.65■■□□□ 1.06
TNFSF13-205ENST00000396545 FKBP1BP68106 108 aa21.65■■□□□ 1.06
TNFSF13-205ENST00000396545 ANKRD2Q9GZV1 360 aa21.65■■□□□ 1.06
TNFSF13-205ENST00000396545 SAGE1Q9NXZ1 904 aa21.65■■□□□ 1.06
TNFSF13-205ENST00000396545 RGS3P49796 1198 aa21.64■■□□□ 1.05
TNFSF13-205ENST00000396545 NBPF9Q3BBW0 867 aa21.64■■□□□ 1.05
TNFSF13-205ENST00000396545 MPHOSPH8Q99549 860 aa21.64■■□□□ 1.05
TNFSF13-205ENST00000396545 MCOLN1Q9GZU1 580 aa21.64■■□□□ 1.05
TNFSF13-205ENST00000396545 SMC5Q8IY18 1101 aa21.63■■□□□ 1.05
TNFSF13-205ENST00000396545 OGFOD1Q8N543 542 aa21.63■■□□□ 1.05
TNFSF13-205ENST00000396545 SCAF8Q9UPN6 1271 aaKnown RBP21.62■■□□□ 1.05
TNFSF13-205ENST00000396545 CCDC85CA6NKD9 419 aa21.61■■□□□ 1.05
TNFSF13-205ENST00000396545 WNT10BO00744 389 aa21.61■■□□□ 1.05
TNFSF13-205ENST00000396545 CHRNDQ07001 517 aa21.61■■□□□ 1.05
TNFSF13-205ENST00000396545 C8orf34Q49A92 452 aa21.61■■□□□ 1.05
TNFSF13-205ENST00000396545 RASAL3Q86YV0 1011 aa21.61■■□□□ 1.05
TNFSF13-205ENST00000396545 FBXW7Q969H0 707 aa21.61■■□□□ 1.05
TNFSF13-205ENST00000396545 MMP14P50281 582 aa21.61■■□□□ 1.05
TNFSF13-205ENST00000396545 BEND3Q5T5X7 828 aa21.61■■□□□ 1.05
TNFSF13-205ENST00000396545 CSRNP1Q96S65 589 aa21.61■■□□□ 1.05
TNFSF13-205ENST00000396545 RNF186Q9NXI6 227 aa21.61■■□□□ 1.05
TNFSF13-205ENST00000396545 IRS2Q9Y4H2 1338 aa21.6■■□□□ 1.05
TNFSF13-205ENST00000396545 ANKRD18BA2A2Z9 1011 aa21.6■■□□□ 1.05
TNFSF13-205ENST00000396545 F6X3S4 739 aa21.6■■□□□ 1.05
TNFSF13-205ENST00000396545 FOXO4P98177 505 aa21.6■■□□□ 1.05
TNFSF13-205ENST00000396545 TTLL5Q6EMB2 1281 aa21.6■■□□□ 1.05
TNFSF13-205ENST00000396545 DGKZQ13574 1117 aa21.59■■□□□ 1.05
TNFSF13-205ENST00000396545 AKAP11Q9UKA4 1901 aa21.59■■□□□ 1.05
TNFSF13-205ENST00000396545 TRPA1O75762 1119 aa21.58■■□□□ 1.05
TNFSF13-205ENST00000396545 KCNJ4P48050 445 aa21.58■■□□□ 1.05
TNFSF13-205ENST00000396545 PRAMEF18Q5VWM3 479 aa21.58■■□□□ 1.05
TNFSF13-205ENST00000396545 MOB2Q70IA6 237 aa21.58■■□□□ 1.05
TNFSF13-205ENST00000396545 A0A1B0GUL6 1792 aa21.58■■□□□ 1.05
TNFSF13-205ENST00000396545 SASH1O94885 1247 aa21.57■■□□□ 1.04
TNFSF13-205ENST00000396545 IFIT5Q13325 482 aaKnown RBP21.57■■□□□ 1.04
TNFSF13-205ENST00000396545 C15orf52Q6ZUT6 534 aaKnown RBP21.57■■□□□ 1.04
TNFSF13-205ENST00000396545 REM2Q8IYK8 340 aaPredicted RBP21.57■■□□□ 1.04
TNFSF13-205ENST00000396545 ZBED3Q96IU2 234 aaPredicted RBP21.57■■□□□ 1.04
TNFSF13-205ENST00000396545 CD209Q9NNX6 404 aa21.57■■□□□ 1.04
TNFSF13-205ENST00000396545 SNAP23O00161 211 aa21.57■■□□□ 1.04
TNFSF13-205ENST00000396545 RGS19P49795 217 aa21.57■■□□□ 1.04
TNFSF13-205ENST00000396545 GTF2IP78347 998 aa21.57■■□□□ 1.04
TNFSF13-205ENST00000396545 SLC4A10Q6U841 1118 aa21.57■■□□□ 1.04
TNFSF13-205ENST00000396545 KIAA0825Q8IV33 1275 aa21.57■■□□□ 1.04
TNFSF13-205ENST00000396545 TAF5LO75529 589 aa21.56■■□□□ 1.04
TNFSF13-205ENST00000396545 ANP32AP39687 249 aaKnown RBP21.56■■□□□ 1.04
TNFSF13-205ENST00000396545 UBE2Q2LH0YL09 131 aa21.55■■□□□ 1.04
TNFSF13-205ENST00000396545 GNAI3P08754 354 aa21.55■■□□□ 1.04
TNFSF13-205ENST00000396545 HELBQ8NG08 1087 aaPredicted RBP21.55■■□□□ 1.04
TNFSF13-205ENST00000396545 HDAC9Q9UKV0 1011 aa21.55■■□□□ 1.04
TNFSF13-205ENST00000396545 GRM8O00222 908 aa21.54■■□□□ 1.04
TNFSF13-205ENST00000396545 EPHA10Q5JZY3 1008 aa21.54■■□□□ 1.04
TNFSF13-205ENST00000396545 CHMP3Q9Y3E7 222 aa21.54■■□□□ 1.04
TNFSF13-205ENST00000396545 LMBR1LQ6UX01 489 aa21.53■■□□□ 1.04
TNFSF13-205ENST00000396545 APOBEC3FQ8IUX4 373 aaKnown RBP21.53■■□□□ 1.04
TNFSF13-205ENST00000396545 CERS5Q8N5B7 392 aa21.53■■□□□ 1.04
TNFSF13-205ENST00000396545 SRCIN1Q9C0H9 1055 aa21.53■■□□□ 1.04
TNFSF13-205ENST00000396545 ALDH1L1O75891 902 aa21.53■■□□□ 1.04
TNFSF13-205ENST00000396545 NF2P35240 595 aa21.53■■□□□ 1.04
TNFSF13-205ENST00000396545 HDAC5Q9UQL6 1122 aa21.53■■□□□ 1.04
TNFSF13-205ENST00000396545 IL1R1P14778 569 aa21.52■■□□□ 1.04
TNFSF13-205ENST00000396545 NUCB1Q02818 461 aa21.52■■□□□ 1.04
TNFSF13-205ENST00000396545 TTLL12Q14166 644 aaPredicted RBP21.52■■□□□ 1.04
TNFSF13-205ENST00000396545 SIRT2Q8IXJ6 389 aa21.52■■□□□ 1.04
TNFSF13-205ENST00000396545 RPAP2Q8IXW5 612 aaPredicted RBP21.52■■□□□ 1.04
TNFSF13-205ENST00000396545 GCC1Q96CN9 775 aa21.52■■□□□ 1.04
TNFSF13-205ENST00000396545 COL1A1P02452 1464 aaPredicted RBP21.51■■□□□ 1.03
TNFSF13-205ENST00000396545 MLLT1Q03111 559 aaPredicted RBP21.51■■□□□ 1.03
TNFSF13-205ENST00000396545 ZNF804AQ7Z570 1209 aa21.51■■□□□ 1.03
TNFSF13-205ENST00000396545 C1orf115Q9H7X2 142 aa21.51■■□□□ 1.03
TNFSF13-205ENST00000396545 CCDC57Q2TAC2 916 aa21.5■■□□□ 1.03
TNFSF13-205ENST00000396545 MTMR14Q8NCE2 650 aa21.5■■□□□ 1.03
TNFSF13-205ENST00000396545 ZNF594Q96JF6 807 aaPredicted RBP21.5■■□□□ 1.03
TNFSF13-205ENST00000396545 TNRC18O15417 2968 aaPredicted RBP21.49■■□□□ 1.03
TNFSF13-205ENST00000396545 DLGAP5Q15398 846 aa21.49■■□□□ 1.03
TNFSF13-205ENST00000396545 LDHAL6AQ6ZMR3 332 aa21.49■■□□□ 1.03
TNFSF13-205ENST00000396545 C9orf78Q9NZ63 289 aaPredicted RBP21.49■■□□□ 1.03
TNFSF13-205ENST00000396545 FKBP1AP62942 108 aaKnown RBP21.48■■□□□ 1.03
TNFSF13-205ENST00000396545 IPO9Q96P70 1041 aaKnown RBP21.48■■□□□ 1.03
TNFSF13-205ENST00000396545 MEIS3Q99687 375 aa21.48■■□□□ 1.03
TNFSF13-205ENST00000396545 GNAI2P04899 355 aa21.48■■□□□ 1.03
TNFSF13-205ENST00000396545 TM4SF4P48230 202 aa21.48■■□□□ 1.03
TNFSF13-205ENST00000396545 PTPN12Q05209 780 aaKnown RBP21.48■■□□□ 1.03
TNFSF13-205ENST00000396545 TAF7LQ5H9L4 462 aa21.48■■□□□ 1.03
TNFSF13-205ENST00000396545 ARMC9Q7Z3E5 817 aa21.48■■□□□ 1.03
TNFSF13-205ENST00000396545 DEFB129Q9H1M3 183 aa21.48■■□□□ 1.03
TNFSF13-205ENST00000396545 CNNM1Q9NRU3 951 aa21.48■■□□□ 1.03
TNFSF13-205ENST00000396545 LDLRAD1Q5T700 205 aa21.47■■□□□ 1.03
TNFSF13-205ENST00000396545 ECM29Q5VYK3 1845 aa21.47■■□□□ 1.03
TNFSF13-205ENST00000396545 CTU1Q7Z7A3 348 aaKnown RBP21.47■■□□□ 1.03
TNFSF13-205ENST00000396545 ANKRD44Q8N8A2 993 aa21.47■■□□□ 1.03
TNFSF13-205ENST00000396545 PCDHAC2Q9Y5I4 1007 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms