RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 PARNO95453 639 aaKnown RBP6.84□□□□□ -1.31
GABPB1-204ENST00000396464 ATP2B1P20020 1258 aa6.84□□□□□ -1.31
GABPB1-204ENST00000396464 ZNF211Q13398 564 aaPredicted RBP6.84□□□□□ -1.31
GABPB1-204ENST00000396464 LDLRAD1Q5T700 205 aa6.84□□□□□ -1.31
GABPB1-204ENST00000396464 TRIM33Q9UPN9 1127 aa6.84□□□□□ -1.31
GABPB1-204ENST00000396464 F8W735 103 aaPredicted RBP6.84□□□□□ -1.32
GABPB1-204ENST00000396464 SMNDC1O75940 238 aaKnown RBP eCLIP6.84□□□□□ -1.32
GABPB1-204ENST00000396464 FSTP19883 344 aa6.84□□□□□ -1.32
GABPB1-204ENST00000396464 HYAL2Q12891 473 aa6.84□□□□□ -1.32
GABPB1-204ENST00000396464 EAPPQ56P03 285 aaPredicted RBP6.84□□□□□ -1.32
GABPB1-204ENST00000396464 METTL16Q86W50 562 aaKnown RBP6.84□□□□□ -1.32
GABPB1-204ENST00000396464 NT5DC4Q86YG4 428 aa6.84□□□□□ -1.32
GABPB1-204ENST00000396464 ETFBKMTQ8IXQ9 262 aa6.84□□□□□ -1.32
GABPB1-204ENST00000396464 MKNK1Q9BUB5 465 aa6.84□□□□□ -1.32
GABPB1-204ENST00000396464 EGFL7Q9UHF1 273 aa6.84□□□□□ -1.32
GABPB1-204ENST00000396464 ABL1P00519 1130 aa6.83□□□□□ -1.32
GABPB1-204ENST00000396464 HOXD8P13378 290 aaPredicted RBP6.83□□□□□ -1.32
GABPB1-204ENST00000396464 COL19A1Q14993 1142 aa6.83□□□□□ -1.32
GABPB1-204ENST00000396464 SETDB1Q15047 1291 aa6.83□□□□□ -1.32
GABPB1-204ENST00000396464 TCEAL1Q15170 157 aa6.83□□□□□ -1.32
GABPB1-204ENST00000396464 FAM117BQ6P1L5 589 aa6.83□□□□□ -1.32
GABPB1-204ENST00000396464 DZIP1LQ8IYY4 767 aaKnown RBP6.83□□□□□ -1.32
GABPB1-204ENST00000396464 SLC43A3Q8NBI5 491 aa6.83□□□□□ -1.32
GABPB1-204ENST00000396464 ARMC5Q96C12 935 aa6.83□□□□□ -1.32
GABPB1-204ENST00000396464 LACRTQ9GZZ8 138 aa6.83□□□□□ -1.32
GABPB1-204ENST00000396464 GSC2O15499 205 aa6.82□□□□□ -1.32
GABPB1-204ENST00000396464 MAP4K4O95819 1239 aaPredicted RBP6.82□□□□□ -1.32
GABPB1-204ENST00000396464 CEP135Q66GS9 1140 aa6.82□□□□□ -1.32
GABPB1-204ENST00000396464 AGGF1Q8N302 714 aaeCLIP6.82□□□□□ -1.32
GABPB1-204ENST00000396464 PMFBP1Q8TBY8 1022 aa6.82□□□□□ -1.32
GABPB1-204ENST00000396464 CEP41Q9BYV8 373 aa6.82□□□□□ -1.32
GABPB1-204ENST00000396464 SAP130Q9H0E3 1048 aa6.82□□□□□ -1.32
GABPB1-204ENST00000396464 CAPN10Q9HC96 672 aa6.82□□□□□ -1.32
GABPB1-204ENST00000396464 ANO2Q9NQ90 1003 aa6.82□□□□□ -1.32
GABPB1-204ENST00000396464 DCTN4Q9UJW0 460 aa6.82□□□□□ -1.32
GABPB1-204ENST00000396464 LINC01387J3KSC0 135 aa6.81□□□□□ -1.32
GABPB1-204ENST00000396464 PEX14O75381 377 aa6.81□□□□□ -1.32
GABPB1-204ENST00000396464 CDC27P30260 824 aa6.81□□□□□ -1.32
GABPB1-204ENST00000396464 CDC25BP30305 580 aa6.81□□□□□ -1.32
GABPB1-204ENST00000396464 NAA30Q147X3 362 aaPredicted RBP6.81□□□□□ -1.32
GABPB1-204ENST00000396464 TRIP4Q15650 581 aaPredicted RBP6.81□□□□□ -1.32
GABPB1-204ENST00000396464 GLYCTKQ8IVS8 523 aa6.81□□□□□ -1.32
GABPB1-204ENST00000396464 ZSCAN29Q8IWY8 852 aaPredicted RBP6.81□□□□□ -1.32
GABPB1-204ENST00000396464 OR13H1Q8NG92 308 aa6.81□□□□□ -1.32
GABPB1-204ENST00000396464 MORC4Q8TE76 937 aa6.81□□□□□ -1.32
GABPB1-204ENST00000396464 COL26A1Q96A83 441 aa6.81□□□□□ -1.32
GABPB1-204ENST00000396464 ZSWIM4Q9H7M6 989 aa6.81□□□□□ -1.32
GABPB1-204ENST00000396464 NLRP2Q9NX02 1062 aa6.81□□□□□ -1.32
GABPB1-204ENST00000396464 STOML1Q9UBI4 398 aa6.81□□□□□ -1.32
GABPB1-204ENST00000396464 RAXQ9Y2V3 346 aa6.81□□□□□ -1.32
GABPB1-204ENST00000396464 ICMTO60725 284 aa6.8□□□□□ -1.32
GABPB1-204ENST00000396464 IBSPP21815 317 aaPredicted RBP6.8□□□□□ -1.32
GABPB1-204ENST00000396464 SSTR4P31391 388 aa6.8□□□□□ -1.32
GABPB1-204ENST00000396464 CD68P34810 354 aaPredicted RBP6.8□□□□□ -1.32
GABPB1-204ENST00000396464 ZAP70P43403 619 aa6.8□□□□□ -1.32
GABPB1-204ENST00000396464 ANAPC15P60006 121 aa6.8□□□□□ -1.32
GABPB1-204ENST00000396464 ACAD11Q709F0 780 aa6.8□□□□□ -1.32
GABPB1-204ENST00000396464 JAZF1Q86VZ6 243 aa6.8□□□□□ -1.32
GABPB1-204ENST00000396464 NCAPG2Q86XI2 1143 aa6.8□□□□□ -1.32
GABPB1-204ENST00000396464 GPR152Q8TDT2 470 aa6.8□□□□□ -1.32
GABPB1-204ENST00000396464 TGIF2Q9GZN2 237 aa6.8□□□□□ -1.32
GABPB1-204ENST00000396464 CCSER2Q9H7U1 834 aa6.8□□□□□ -1.32
GABPB1-204ENST00000396464 DHX15O43143 795 aaKnown RBP6.79□□□□□ -1.32
GABPB1-204ENST00000396464 OCLNQ16625 522 aa6.79□□□□□ -1.32
GABPB1-204ENST00000396464 TXNDC11Q6PKC3 985 aa6.79□□□□□ -1.32
GABPB1-204ENST00000396464 ABTB2Q8N961 1025 aa6.79□□□□□ -1.32
GABPB1-204ENST00000396464 KRTAP9-2Q9BYQ4 174 aa6.79□□□□□ -1.32
GABPB1-204ENST00000396464 CXXC1Q9P0U4 656 aaPredicted RBP6.79□□□□□ -1.32
GABPB1-204ENST00000396464 NOP58Q9Y2X3 529 aaKnown RBP6.79□□□□□ -1.32
GABPB1-204ENST00000396464 CCDC194A0A1B0GVG4 234 aa6.78□□□□□ -1.32
GABPB1-204ENST00000396464 P4HBP07237 508 aaKnown RBP6.78□□□□□ -1.32
GABPB1-204ENST00000396464 ATP11AP98196 1134 aa6.78□□□□□ -1.32
GABPB1-204ENST00000396464 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.78□□□□□ -1.32
GABPB1-204ENST00000396464 TEX2Q8IWB9 1127 aa6.78□□□□□ -1.32
GABPB1-204ENST00000396464 TMEM87AQ8NBN3 555 aa6.78□□□□□ -1.32
GABPB1-204ENST00000396464 TTC16Q8NEE8 873 aa6.78□□□□□ -1.32
GABPB1-204ENST00000396464 ABI2Q9NYB9 513 aaPredicted RBP6.78□□□□□ -1.32
GABPB1-204ENST00000396464 STIM2Q9P246 746 aa6.78□□□□□ -1.32
GABPB1-204ENST00000396464 MAGEC2Q9UBF1 373 aaPredicted RBP6.78□□□□□ -1.32
GABPB1-204ENST00000396464 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.77□□□□□ -1.33
GABPB1-204ENST00000396464 PTPRAP18433 802 aa6.77□□□□□ -1.33
GABPB1-204ENST00000396464 DNAJA1P31689 397 aaKnown RBP6.77□□□□□ -1.33
GABPB1-204ENST00000396464 TNNI2P48788 182 aa6.77□□□□□ -1.33
GABPB1-204ENST00000396464 CABP4P57796 275 aa6.77□□□□□ -1.33
GABPB1-204ENST00000396464 FANCCQ00597 558 aa6.77□□□□□ -1.33
GABPB1-204ENST00000396464 ECM1Q16610 540 aa6.77□□□□□ -1.33
GABPB1-204ENST00000396464 DUOXA2Q1HG44 320 aa6.77□□□□□ -1.33
GABPB1-204ENST00000396464 UTP4Q969X6 686 aaKnown RBP6.77□□□□□ -1.33
GABPB1-204ENST00000396464 BRINP2Q9C0B6 783 aa6.77□□□□□ -1.33
GABPB1-204ENST00000396464 ACBD3Q9H3P7 528 aa6.77□□□□□ -1.33
GABPB1-204ENST00000396464 CHPF2Q9P2E5 772 aa6.77□□□□□ -1.33
GABPB1-204ENST00000396464 IGLV1-40P01703 118 aa6.76□□□□□ -1.33
GABPB1-204ENST00000396464 NEFLP07196 543 aa6.76□□□□□ -1.33
GABPB1-204ENST00000396464 HSP90AB2PQ58FF8 381 aa6.76□□□□□ -1.33
GABPB1-204ENST00000396464 COL13A1Q5TAT6 717 aaPredicted RBP6.76□□□□□ -1.33
GABPB1-204ENST00000396464 ZNF746Q6NUN9 644 aaPredicted RBP6.76□□□□□ -1.33
GABPB1-204ENST00000396464 Q6ZS46 218 aa6.76□□□□□ -1.33
GABPB1-204ENST00000396464 KLHL23Q8NBE8 558 aa6.76□□□□□ -1.33
GABPB1-204ENST00000396464 GALNT11Q8NCW6 608 aa6.76□□□□□ -1.33
GABPB1-204ENST00000396464 GMLQ99445 158 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms