RNA–Protein interactions for RNA: ENST00000394083.6

GAPVD1-204, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 5 BASIC

Gene GAPVD1, Length 4,747 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-204ENST00000394083 KIF28PB7ZC32 967 aa10.2□□□□□ -0.78
GAPVD1-204ENST00000394083 DDX58O95786 925 aaKnown RBP10.2□□□□□ -0.78
GAPVD1-204ENST00000394083 BCAMP50895 628 aa10.2□□□□□ -0.78
GAPVD1-204ENST00000394083 NTRK3Q16288 839 aa10.2□□□□□ -0.78
GAPVD1-204ENST00000394083 OLFM4Q6UX06 510 aa10.2□□□□□ -0.78
GAPVD1-204ENST00000394083 RASGRP2Q7LDG7 609 aa10.2□□□□□ -0.78
GAPVD1-204ENST00000394083 PDLIM2Q96JY6 352 aa10.2□□□□□ -0.78
GAPVD1-204ENST00000394083 PDGFDQ9GZP0 370 aaPredicted RBP10.2□□□□□ -0.78
GAPVD1-204ENST00000394083 DNM1Q05193 864 aaKnown RBP10.2□□□□□ -0.78
GAPVD1-204ENST00000394083 RANBP6O60518 1105 aaKnown RBP10.19□□□□□ -0.78
GAPVD1-204ENST00000394083 ZNF445P59923 1031 aa10.19□□□□□ -0.78
GAPVD1-204ENST00000394083 BECN1Q14457 450 aa10.19□□□□□ -0.78
GAPVD1-204ENST00000394083 DDB1Q16531 1140 aa10.19□□□□□ -0.78
GAPVD1-204ENST00000394083 NSUN7Q8NE18 718 aaKnown RBP10.19□□□□□ -0.78
GAPVD1-204ENST00000394083 PRPF40AO75400 957 aaKnown RBP10.19□□□□□ -0.78
GAPVD1-204ENST00000394083 IFIT2P09913 472 aaKnown RBP10.19□□□□□ -0.78
GAPVD1-204ENST00000394083 CDC27P30260 824 aa10.19□□□□□ -0.78
GAPVD1-204ENST00000394083 SYTL4Q96C24 671 aaPredicted RBP10.19□□□□□ -0.78
GAPVD1-204ENST00000394083 THRAP3Q9Y2W1 955 aaKnown RBP10.19□□□□□ -0.78
GAPVD1-204ENST00000394083 MYH4Q9Y623 1939 aa10.19□□□□□ -0.78
GAPVD1-204ENST00000394083 EXOC5O00471 708 aa10.19□□□□□ -0.78
GAPVD1-204ENST00000394083 GJB2P29033 226 aa10.19□□□□□ -0.78
GAPVD1-204ENST00000394083 NFIXQ14938 502 aa10.19□□□□□ -0.78
GAPVD1-204ENST00000394083 ADD2P35612 726 aa10.18□□□□□ -0.78
GAPVD1-204ENST00000394083 NOM1Q5C9Z4 860 aaKnown RBP10.18□□□□□ -0.78
GAPVD1-204ENST00000394083 FBXL16Q8N461 479 aa10.18□□□□□ -0.78
GAPVD1-204ENST00000394083 C8orf37Q96NL8 207 aa10.18□□□□□ -0.78
GAPVD1-204ENST00000394083 DAXXQ9UER7 740 aaPredicted RBP10.18□□□□□ -0.78
GAPVD1-204ENST00000394083 LIG1P18858 919 aa10.18□□□□□ -0.78
GAPVD1-204ENST00000394083 ATP6V1AP38606 617 aa10.18□□□□□ -0.78
GAPVD1-204ENST00000394083 IL15P40933 162 aaPredicted RBP10.18□□□□□ -0.78
GAPVD1-204ENST00000394083 RESTQ13127 1097 aa10.18□□□□□ -0.78
GAPVD1-204ENST00000394083 NPY5RQ15761 445 aa10.18□□□□□ -0.78
GAPVD1-204ENST00000394083 GTF3C6Q969F1 213 aa10.18□□□□□ -0.78
GAPVD1-204ENST00000394083 GPR101Q96P66 508 aaPredicted RBP10.18□□□□□ -0.78
GAPVD1-204ENST00000394083 GOLPH3LQ9H4A5 285 aa10.18□□□□□ -0.78
GAPVD1-204ENST00000394083 MKRN1Q9UHC7 482 aaKnown RBP10.18□□□□□ -0.78
GAPVD1-204ENST00000394083 PARP14Q460N5 1801 aa10.18□□□□□ -0.78
GAPVD1-204ENST00000394083 ZNF512BQ96KM6 892 aaPredicted RBP10.18□□□□□ -0.78
GAPVD1-204ENST00000394083 UPF2Q9HAU5 1272 aaKnown RBP10.18□□□□□ -0.78
GAPVD1-204ENST00000394083 CCDC87Q9NVE4 849 aa10.18□□□□□ -0.78
GAPVD1-204ENST00000394083 ZNF330Q9Y3S2 320 aaPredicted RBP10.18□□□□□ -0.78
GAPVD1-204ENST00000394083 G3BP1Q13283 466 aaKnown RBP eCLIP10.18□□□□□ -0.78
GAPVD1-204ENST00000394083 ERICH6Q7L0X2 663 aa10.18□□□□□ -0.78
GAPVD1-204ENST00000394083 RAB11FIP4Q86YS3 637 aa10.18□□□□□ -0.78
GAPVD1-204ENST00000394083 RIOK1Q9BRS2 568 aaKnown RBP10.18□□□□□ -0.78
GAPVD1-204ENST00000394083 C5orf42Q9H799 3197 aa10.17□□□□□ -0.78
GAPVD1-204ENST00000394083 GSG1L2A8MUP6 293 aa10.17□□□□□ -0.78
GAPVD1-204ENST00000394083 GUCY1A2P33402 732 aa10.17□□□□□ -0.78
GAPVD1-204ENST00000394083 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.17□□□□□ -0.78
GAPVD1-204ENST00000394083 LIMCH1Q9UPQ0 1083 aa10.17□□□□□ -0.78
GAPVD1-204ENST00000394083 APOBRQ0VD83 1088 aa10.17□□□□□ -0.78
GAPVD1-204ENST00000394083 SNW1Q13573 536 aaKnown RBP10.17□□□□□ -0.78
GAPVD1-204ENST00000394083 MCMDC2Q4G0Z9 681 aa10.17□□□□□ -0.78
GAPVD1-204ENST00000394083 Q6ZUG5 572 aa10.17□□□□□ -0.78
GAPVD1-204ENST00000394083 HSD3B7Q9H2F3 369 aa10.17□□□□□ -0.78
GAPVD1-204ENST00000394083 MYH7BA7E2Y1 1941 aa10.17□□□□□ -0.78
GAPVD1-204ENST00000394083 WDR81Q562E7 1941 aa10.17□□□□□ -0.78
GAPVD1-204ENST00000394083 HAND2P61296 217 aa10.17□□□□□ -0.78
GAPVD1-204ENST00000394083 OTUD7BQ6GQQ9 843 aa10.17□□□□□ -0.78
GAPVD1-204ENST00000394083 IGDCC4Q8TDY8 1250 aa10.17□□□□□ -0.78
GAPVD1-204ENST00000394083 FSD1Q9BTV5 496 aa10.17□□□□□ -0.78
GAPVD1-204ENST00000394083 CYP2D7A0A087X1C5 515 aa10.16□□□□□ -0.78
GAPVD1-204ENST00000394083 FAM177BA6PVY3 158 aa10.16□□□□□ -0.78
GAPVD1-204ENST00000394083 ARXQ96QS3 562 aa10.16□□□□□ -0.78
GAPVD1-204ENST00000394083 PDIA3P30101 505 aaKnown RBP10.16□□□□□ -0.78
GAPVD1-204ENST00000394083 EARS2Q5JPH6 523 aaKnown RBP10.16□□□□□ -0.78
GAPVD1-204ENST00000394083 ARHGEF1Q92888 912 aaKnown RBP10.16□□□□□ -0.78
GAPVD1-204ENST00000394083 STRBPQ96SI9 672 aaKnown RBP10.16□□□□□ -0.78
GAPVD1-204ENST00000394083 NEXNQ0ZGT2 675 aa10.16□□□□□ -0.78
GAPVD1-204ENST00000394083 CAVIN1Q6NZI2 390 aaKnown RBP10.16□□□□□ -0.78
GAPVD1-204ENST00000394083 LCORLQ8N3X6 602 aa10.16□□□□□ -0.78
GAPVD1-204ENST00000394083 DDR1Q08345 913 aa10.16□□□□□ -0.78
GAPVD1-204ENST00000394083 ERC1Q8IUD2 1116 aa10.16□□□□□ -0.78
GAPVD1-204ENST00000394083 GRPEL1Q9HAV7 217 aa10.16□□□□□ -0.78
GAPVD1-204ENST00000394083 F13A1P00488 732 aa10.15□□□□□ -0.78
GAPVD1-204ENST00000394083 STK3Q13188 491 aa10.15□□□□□ -0.78
GAPVD1-204ENST00000394083 NBPF11Q86T75 865 aa10.15□□□□□ -0.78
GAPVD1-204ENST00000394083 CNTNAP4Q9C0A0 1308 aa10.15□□□□□ -0.78
GAPVD1-204ENST00000394083 EDIL3O43854 480 aa10.15□□□□□ -0.78
GAPVD1-204ENST00000394083 FUT2Q10981 343 aa10.15□□□□□ -0.78
GAPVD1-204ENST00000394083 IQSEC3Q9UPP2 1182 aaPredicted RBP10.15□□□□□ -0.78
GAPVD1-204ENST00000394083 ZSCAN22P10073 491 aaPredicted RBP10.15□□□□□ -0.78
GAPVD1-204ENST00000394083 GYG1P46976 350 aa10.15□□□□□ -0.78
GAPVD1-204ENST00000394083 ZNF827Q17R98 1081 aa10.15□□□□□ -0.78
GAPVD1-204ENST00000394083 FERMT3Q86UX7 667 aa10.15□□□□□ -0.78
GAPVD1-204ENST00000394083 FAM84BQ96KN1 310 aaPredicted RBP10.15□□□□□ -0.79
GAPVD1-204ENST00000394083 PDRG1Q9NUG6 133 aa10.15□□□□□ -0.79
GAPVD1-204ENST00000394083 SYCE3A1L190 88 aa10.14□□□□□ -0.79
GAPVD1-204ENST00000394083 STX6O43752 255 aa10.14□□□□□ -0.79
GAPVD1-204ENST00000394083 CHRNDQ07001 517 aa10.14□□□□□ -0.79
GAPVD1-204ENST00000394083 NEUROD6Q96NK8 337 aa10.14□□□□□ -0.79
GAPVD1-204ENST00000394083 MINPP1Q9UNW1 487 aa10.14□□□□□ -0.79
GAPVD1-204ENST00000394083 MROH7-TTC4A0A0A0MT08 1334 aa10.14□□□□□ -0.79
GAPVD1-204ENST00000394083 GPAA1O43292 621 aa10.14□□□□□ -0.79
GAPVD1-204ENST00000394083 PDE8AO60658 829 aa10.14□□□□□ -0.79
GAPVD1-204ENST00000394083 MED15Q96RN5 788 aa10.14□□□□□ -0.79
GAPVD1-204ENST00000394083 ZNF532Q9HCE3 1301 aa10.14□□□□□ -0.79
GAPVD1-204ENST00000394083 RANBP2P49792 3224 aaKnown RBP10.14□□□□□ -0.79
GAPVD1-204ENST00000394083 PDE6AP16499 860 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms