RNA–Protein interactions for RNA: ENST00000392023.1

SPTBN4-203, Transcript of spectrin beta, non-erythrocytic 4, humanhuman

TSL 1 (best) BASIC

Gene SPTBN4, Length 2,419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4-203ENST00000392023 ZNF532Q9HCE3 1301 aa25.11■■□□□ 1.61
SPTBN4-203ENST00000392023 APPP05067 770 aa25.11■■□□□ 1.61
SPTBN4-203ENST00000392023 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.11■■□□□ 1.61
SPTBN4-203ENST00000392023 TFIP11Q9UBB9 837 aaKnown RBP25.11■■□□□ 1.61
SPTBN4-203ENST00000392023 HMGB1P09429 215 aaKnown RBP25.11■■□□□ 1.61
SPTBN4-203ENST00000392023 RAB11FIP4Q86YS3 637 aa25.11■■□□□ 1.61
SPTBN4-203ENST00000392023 RNF214Q8ND24 703 aa25.11■■□□□ 1.61
SPTBN4-203ENST00000392023 USP21Q9UK80 565 aa25.11■■□□□ 1.61
SPTBN4-203ENST00000392023 SPEF2Q9C093 1822 aa25.1■■□□□ 1.61
SPTBN4-203ENST00000392023 NWD2Q9ULI1 1742 aa25.1■■□□□ 1.61
SPTBN4-203ENST00000392023 RASGRF1Q13972 1273 aa25.1■■□□□ 1.61
SPTBN4-203ENST00000392023 IGHMBP2P38935 993 aaKnown RBP25.1■■□□□ 1.61
SPTBN4-203ENST00000392023 IMMTQ16891 758 aaKnown RBP25.1■■□□□ 1.61
SPTBN4-203ENST00000392023 LRSAM1Q6UWE0 723 aa25.1■■□□□ 1.61
SPTBN4-203ENST00000392023 NKX2-3Q8TAU0 364 aa25.1■■□□□ 1.61
SPTBN4-203ENST00000392023 SRP68Q9UHB9 627 aaKnown RBP25.1■■□□□ 1.61
SPTBN4-203ENST00000392023 COL4A1P02462 1669 aa25.09■■□□□ 1.61
SPTBN4-203ENST00000392023 SLC5A1P13866 664 aa25.09■■□□□ 1.61
SPTBN4-203ENST00000392023 SPATA5Q8NB90 893 aa25.09■■□□□ 1.61
SPTBN4-203ENST00000392023 ARID4AP29374 1257 aaPredicted RBP25.08■■□□□ 1.61
SPTBN4-203ENST00000392023 AK7Q96M32 723 aa25.08■■□□□ 1.61
SPTBN4-203ENST00000392023 TAF1P21675 1872 aa25.08■■□□□ 1.61
SPTBN4-203ENST00000392023 PDE6AP16499 860 aa25.08■■□□□ 1.61
SPTBN4-203ENST00000392023 CHRNDQ07001 517 aa25.08■■□□□ 1.61
SPTBN4-203ENST00000392023 TBC1D9BQ66K14 1250 aa25.08■■□□□ 1.61
SPTBN4-203ENST00000392023 TMEM87AQ8NBN3 555 aa25.08■■□□□ 1.61
SPTBN4-203ENST00000392023 CTDNEP1O95476 244 aa25.07■■□□□ 1.6
SPTBN4-203ENST00000392023 PDCP20941 246 aa25.07■■□□□ 1.6
SPTBN4-203ENST00000392023 AMIGO3Q86WK7 504 aa25.07■■□□□ 1.6
SPTBN4-203ENST00000392023 ZNF652Q9Y2D9 606 aa25.07■■□□□ 1.6
SPTBN4-203ENST00000392023 ZNF213O14771 459 aa25.07■■□□□ 1.6
SPTBN4-203ENST00000392023 GTF2E1P29083 439 aaPredicted RBP25.07■■□□□ 1.6
SPTBN4-203ENST00000392023 TTF1Q15361 905 aaPredicted RBP25.07■■□□□ 1.6
SPTBN4-203ENST00000392023 ZNF512BQ96KM6 892 aaPredicted RBP25.07■■□□□ 1.6
SPTBN4-203ENST00000392023 INCENPQ9NQS7 918 aa25.07■■□□□ 1.6
SPTBN4-203ENST00000392023 CTNNA3Q9UI47 895 aa25.07■■□□□ 1.6
SPTBN4-203ENST00000392023 PFKFB2O60825 505 aa25.06■■□□□ 1.6
SPTBN4-203ENST00000392023 TICAM2Q86XR7 235 aa25.06■■□□□ 1.6
SPTBN4-203ENST00000392023 MAGEB6Q8N7X4 407 aa25.06■■□□□ 1.6
SPTBN4-203ENST00000392023 PDIA3P30101 505 aaKnown RBP25.06■■□□□ 1.6
SPTBN4-203ENST00000392023 UBE2HP62256 183 aa25.06■■□□□ 1.6
SPTBN4-203ENST00000392023 FAM184AQ8NB25 1140 aa25.06■■□□□ 1.6
SPTBN4-203ENST00000392023 MYH7P12883 1935 aa25.06■■□□□ 1.6
SPTBN4-203ENST00000392023 DDX60Q8IY21 1712 aaKnown RBP25.05■■□□□ 1.6
SPTBN4-203ENST00000392023 UQCRFS1P1P0C7P4 283 aa25.05■■□□□ 1.6
SPTBN4-203ENST00000392023 ABCC12Q96J65 1359 aa25.05■■□□□ 1.6
SPTBN4-203ENST00000392023 TTC6Q86TZ1 520 aa25.05■■□□□ 1.6
SPTBN4-203ENST00000392023 NSUN7Q8NE18 718 aaKnown RBP25.05■■□□□ 1.6
SPTBN4-203ENST00000392023 H3BQV1 296 aa25.04■■□□□ 1.6
SPTBN4-203ENST00000392023 IFFO2Q5TF58 517 aa25.04■■□□□ 1.6
SPTBN4-203ENST00000392023 ZSCAN25Q6NSZ9 544 aa25.04■■□□□ 1.6
SPTBN4-203ENST00000392023 NBPF3Q9H094 633 aa25.04■■□□□ 1.6
SPTBN4-203ENST00000392023 BCL2L12Q9HB09 334 aa25.04■■□□□ 1.6
SPTBN4-203ENST00000392023 TCRBV5S4A2TA0A5A2 114 aa25.04■■□□□ 1.6
SPTBN4-203ENST00000392023 GNPATO15228 680 aa25.04■■□□□ 1.6
SPTBN4-203ENST00000392023 FNBP4Q8N3X1 1017 aaPredicted RBP25.04■■□□□ 1.6
SPTBN4-203ENST00000392023 AGXT2Q9BYV1 514 aa25.04■■□□□ 1.6
SPTBN4-203ENST00000392023 PTPDC1A2A3K4 754 aa25.03■■□□□ 1.6
SPTBN4-203ENST00000392023 PRC1O43663 620 aa25.03■■□□□ 1.6
SPTBN4-203ENST00000392023 GUCY1B3Q02153 619 aa25.03■■□□□ 1.6
SPTBN4-203ENST00000392023 AIDAQ96BJ3 306 aa25.03■■□□□ 1.6
SPTBN4-203ENST00000392023 MAP7D2Q96T17 732 aa25.03■■□□□ 1.6
SPTBN4-203ENST00000392023 STK11IPQ8N1F8 1099 aa25.03■■□□□ 1.6
SPTBN4-203ENST00000392023 TRIM44Q96DX7 344 aaPredicted RBP25.03■■□□□ 1.6
SPTBN4-203ENST00000392023 TAOK2Q9UL54 1235 aa25.03■■□□□ 1.6
SPTBN4-203ENST00000392023 GYG1P46976 350 aa25.02■■□□□ 1.6
SPTBN4-203ENST00000392023 ANTXR2P58335 489 aa25.02■■□□□ 1.6
SPTBN4-203ENST00000392023 UBE3CQ15386 1083 aa25.02■■□□□ 1.6
SPTBN4-203ENST00000392023 CLEC4GQ6UXB4 293 aa25.02■■□□□ 1.6
SPTBN4-203ENST00000392023 SYAP1Q96A49 352 aaPredicted RBP25.02■■□□□ 1.6
SPTBN4-203ENST00000392023 KRT85P78386 507 aa25.02■■□□□ 1.6
SPTBN4-203ENST00000392023 CEBPZQ03701 1054 aaKnown RBP25.02■■□□□ 1.6
SPTBN4-203ENST00000392023 TBC1D10CQ8IV04 446 aa25.02■■□□□ 1.6
SPTBN4-203ENST00000392023 ARMT1Q9H993 441 aa25.02■■□□□ 1.6
SPTBN4-203ENST00000392023 CELF1Q92879 486 aaKnown RBP25.01■■□□□ 1.59
SPTBN4-203ENST00000392023 RALYLQ86SE5 291 aaKnown RBP25.01■■□□□ 1.59
SPTBN4-203ENST00000392023 MB21D2Q8IYB1 491 aaPredicted RBP25.01■■□□□ 1.59
SPTBN4-203ENST00000392023 SMARCC2Q8TAQ2 1214 aa25.01■■□□□ 1.59
SPTBN4-203ENST00000392023 PRKAB2O43741 272 aa25■■□□□ 1.59
SPTBN4-203ENST00000392023 MIGA1Q8NAN2 632 aa25■■□□□ 1.59
SPTBN4-203ENST00000392023 NCOA7Q8NI08 942 aa25■■□□□ 1.59
SPTBN4-203ENST00000392023 STRBPQ96SI9 672 aaKnown RBP25■■□□□ 1.59
SPTBN4-203ENST00000392023 CCNL1Q9UK58 526 aaPredicted RBP25■■□□□ 1.59
SPTBN4-203ENST00000392023 RREB1Q92766 1687 aa25■■□□□ 1.59
SPTBN4-203ENST00000392023 COL5A3P25940 1745 aaPredicted RBP25■■□□□ 1.59
SPTBN4-203ENST00000392023 PHF14O94880 888 aa25■■□□□ 1.59
SPTBN4-203ENST00000392023 MBD4O95243 580 aa25■■□□□ 1.59
SPTBN4-203ENST00000392023 MCM5P33992 734 aa25■■□□□ 1.59
SPTBN4-203ENST00000392023 TERF1P54274 439 aa25■■□□□ 1.59
SPTBN4-203ENST00000392023 ANKRD18AQ8IVF6 992 aa25■■□□□ 1.59
SPTBN4-203ENST00000392023 KLF18A0A0U1RQI7 1052 aa24.98■■□□□ 1.59
SPTBN4-203ENST00000392023 MAP3K12Q12852 859 aa24.98■■□□□ 1.59
SPTBN4-203ENST00000392023 GIMAP6Q6P9H5 292 aa24.98■■□□□ 1.59
SPTBN4-203ENST00000392023 ANP32BQ92688 251 aaKnown RBP24.98■■□□□ 1.59
SPTBN4-203ENST00000392023 CDC5LQ99459 802 aaKnown RBP24.98■■□□□ 1.59
SPTBN4-203ENST00000392023 TSPY26PQ9H489 355 aa24.98■■□□□ 1.59
SPTBN4-203ENST00000392023 ABCF2Q9UG63 623 aa24.98■■□□□ 1.59
SPTBN4-203ENST00000392023 LRP5O75197 1615 aa24.98■■□□□ 1.59
SPTBN4-203ENST00000392023 MEX3CQ5U5Q3 659 aaKnown RBP24.98■■□□□ 1.59
SPTBN4-203ENST00000392023 LRP2BPQ9P2M1 347 aa24.98■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms