RNA–Protein interactions for RNA: ENST00000389645.7

CAPRIN1-202, Transcript of cell cycle associated protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPRIN1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-202ENST00000389645 ST3GAL1Q11201 340 aa14.21□□□□□ -0.13
CAPRIN1-202ENST00000389645 LUZP1Q86V48 1076 aa14.21□□□□□ -0.13
CAPRIN1-202ENST00000389645 SEPT12Q8IYM1 358 aa14.21□□□□□ -0.13
CAPRIN1-202ENST00000389645 U3KPZ7 1027 aaPredicted RBP14.21□□□□□ -0.13
CAPRIN1-202ENST00000389645 SNAP23O00161 211 aa14.21□□□□□ -0.13
CAPRIN1-202ENST00000389645 SF3A1Q15459 793 aaKnown RBP14.21□□□□□ -0.13
CAPRIN1-202ENST00000389645 TTLL5Q6EMB2 1281 aa14.21□□□□□ -0.13
CAPRIN1-202ENST00000389645 AMIGO3Q86WK7 504 aa14.21□□□□□ -0.13
CAPRIN1-202ENST00000389645 HMG20BQ9P0W2 317 aa14.21□□□□□ -0.13
CAPRIN1-202ENST00000389645 ZRSR1Q15695 479 aaKnown RBP14.21□□□□□ -0.14
CAPRIN1-202ENST00000389645 QTRT2Q9H974 415 aaKnown RBP14.21□□□□□ -0.14
CAPRIN1-202ENST00000389645 NUP98P52948 1817 aa14.2□□□□□ -0.14
CAPRIN1-202ENST00000389645 TOB2Q14106 344 aaPredicted RBP14.2□□□□□ -0.14
CAPRIN1-202ENST00000389645 CCDC24Q8N4L8 307 aa14.2□□□□□ -0.14
CAPRIN1-202ENST00000389645 TSC1Q92574 1164 aa14.2□□□□□ -0.14
CAPRIN1-202ENST00000389645 SEC31BQ9NQW1 1179 aa14.2□□□□□ -0.14
CAPRIN1-202ENST00000389645 CNNM1Q9NRU3 951 aa14.2□□□□□ -0.14
CAPRIN1-202ENST00000389645 PLA2G12BQ9BX93 195 aa14.2□□□□□ -0.14
CAPRIN1-202ENST00000389645 SRP68Q9UHB9 627 aaKnown RBP14.2□□□□□ -0.14
CAPRIN1-202ENST00000389645 A0A0G2JLW4 131 aa14.2□□□□□ -0.14
CAPRIN1-202ENST00000389645 ME1P48163 572 aa14.2□□□□□ -0.14
CAPRIN1-202ENST00000389645 CCDC158Q5M9N0 1113 aa14.2□□□□□ -0.14
CAPRIN1-202ENST00000389645 FTOQ9C0B1 505 aaKnown RBP eCLIP14.2□□□□□ -0.14
CAPRIN1-202ENST00000389645 SCAND2PQ9GZW5 306 aaPredicted RBP14.2□□□□□ -0.14
CAPRIN1-202ENST00000389645 TOMM22Q9NS69 142 aa14.2□□□□□ -0.14
CAPRIN1-202ENST00000389645 CPLX1O14810 134 aa14.19□□□□□ -0.14
CAPRIN1-202ENST00000389645 PDE8AO60658 829 aa14.19□□□□□ -0.14
CAPRIN1-202ENST00000389645 METTL24Q5JXM2 366 aa14.19□□□□□ -0.14
CAPRIN1-202ENST00000389645 ERCC4Q92889 916 aaPredicted RBP14.19□□□□□ -0.14
CAPRIN1-202ENST00000389645 UTP14AQ9BVJ6 771 aaKnown RBP14.19□□□□□ -0.14
CAPRIN1-202ENST00000389645 GOLGB1Q14789 3259 aaKnown RBP14.19□□□□□ -0.14
CAPRIN1-202ENST00000389645 A0A087WWV3 80 aa14.19□□□□□ -0.14
CAPRIN1-202ENST00000389645 ANKRD18BA2A2Z9 1011 aa14.19□□□□□ -0.14
CAPRIN1-202ENST00000389645 CBX1P83916 185 aa14.19□□□□□ -0.14
CAPRIN1-202ENST00000389645 ANO6Q4KMQ2 910 aa14.19□□□□□ -0.14
CAPRIN1-202ENST00000389645 HS1BP3Q53T59 392 aa14.19□□□□□ -0.14
CAPRIN1-202ENST00000389645 OTUD7BQ6GQQ9 843 aa14.19□□□□□ -0.14
CAPRIN1-202ENST00000389645 KBTBD3Q8NAB2 608 aa14.19□□□□□ -0.14
CAPRIN1-202ENST00000389645 CCNL1Q9UK58 526 aaPredicted RBP14.19□□□□□ -0.14
CAPRIN1-202ENST00000389645 CDHR2Q9BYE9 1310 aa14.19□□□□□ -0.14
CAPRIN1-202ENST00000389645 PI16Q6UXB8 463 aa14.18□□□□□ -0.14
CAPRIN1-202ENST00000389645 GNPATO15228 680 aa14.18□□□□□ -0.14
CAPRIN1-202ENST00000389645 CIAO1O76071 339 aa14.18□□□□□ -0.14
CAPRIN1-202ENST00000389645 XAGE2Q96GT9 111 aa14.18□□□□□ -0.14
CAPRIN1-202ENST00000389645 SH3TC1Q8TE82 1336 aa14.18□□□□□ -0.14
CAPRIN1-202ENST00000389645 BECN2A8MW95 431 aa14.18□□□□□ -0.14
CAPRIN1-202ENST00000389645 GOLGA6L19H0YKK7 550 aa14.18□□□□□ -0.14
CAPRIN1-202ENST00000389645 HAUS7Q99871 368 aa14.18□□□□□ -0.14
CAPRIN1-202ENST00000389645 DNAJC25Q9H1X3 360 aa14.18□□□□□ -0.14
CAPRIN1-202ENST00000389645 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.18□□□□□ -0.14
CAPRIN1-202ENST00000389645 RIPOR2Q9Y4F9 1068 aa14.18□□□□□ -0.14
CAPRIN1-202ENST00000389645 IDH1O75874 414 aaKnown RBP14.17□□□□□ -0.14
CAPRIN1-202ENST00000389645 POLR3DP05423 398 aaPredicted RBP14.17□□□□□ -0.14
CAPRIN1-202ENST00000389645 TYRO3Q06418 890 aa14.17□□□□□ -0.14
CAPRIN1-202ENST00000389645 SCARF1Q14162 830 aa14.17□□□□□ -0.14
CAPRIN1-202ENST00000389645 RALYLQ86SE5 291 aaKnown RBP14.17□□□□□ -0.14
CAPRIN1-202ENST00000389645 GOLGA6L6A8MZA4 724 aa14.17□□□□□ -0.14
CAPRIN1-202ENST00000389645 GNL2Q13823 731 aaKnown RBP14.17□□□□□ -0.14
CAPRIN1-202ENST00000389645 LEO1Q8WVC0 666 aaPredicted RBP14.17□□□□□ -0.14
CAPRIN1-202ENST00000389645 GPHNQ9NQX3 736 aaPredicted RBP14.17□□□□□ -0.14
CAPRIN1-202ENST00000389645 TRPC5Q9UL62 973 aaPredicted RBP14.17□□□□□ -0.14
CAPRIN1-202ENST00000389645 USPL1Q5W0Q7 1092 aa14.17□□□□□ -0.14
CAPRIN1-202ENST00000389645 CCDC73Q6ZRK6 1079 aa14.17□□□□□ -0.14
CAPRIN1-202ENST00000389645 PTPDC1A2A3K4 754 aa14.16□□□□□ -0.14
CAPRIN1-202ENST00000389645 NR1I2O75469 434 aa14.16□□□□□ -0.14
CAPRIN1-202ENST00000389645 SCRN1Q12765 414 aa14.16□□□□□ -0.14
CAPRIN1-202ENST00000389645 GTF3C6Q969F1 213 aa14.16□□□□□ -0.14
CAPRIN1-202ENST00000389645 KIF3AQ9Y496 699 aa14.16□□□□□ -0.14
CAPRIN1-202ENST00000389645 PPP4R3BQ5MIZ7 849 aa14.16□□□□□ -0.14
CAPRIN1-202ENST00000389645 SDF4Q9BRK5 362 aa14.16□□□□□ -0.14
CAPRIN1-202ENST00000389645 NOLC1Q14978 699 aaKnown RBP eCLIP14.16□□□□□ -0.14
CAPRIN1-202ENST00000389645 UVSSAQ2YD98 709 aa14.16□□□□□ -0.14
CAPRIN1-202ENST00000389645 C3orf67Q6ZVT6 689 aa14.16□□□□□ -0.14
CAPRIN1-202ENST00000389645 DHX32Q7L7V1 743 aaKnown RBP14.16□□□□□ -0.14
CAPRIN1-202ENST00000389645 NTSR2O95665 410 aa14.15□□□□□ -0.14
CAPRIN1-202ENST00000389645 RXRAP19793 462 aa14.15□□□□□ -0.14
CAPRIN1-202ENST00000389645 ZNF165P49910 485 aa14.15□□□□□ -0.14
CAPRIN1-202ENST00000389645 ATP2B3Q16720 1220 aa14.15□□□□□ -0.14
CAPRIN1-202ENST00000389645 ERFEQ4G0M1 354 aa14.15□□□□□ -0.14
CAPRIN1-202ENST00000389645 TBC1D9BQ66K14 1250 aa14.15□□□□□ -0.14
CAPRIN1-202ENST00000389645 CCDC144CPQ8IYA2 1237 aa14.15□□□□□ -0.14
CAPRIN1-202ENST00000389645 TMEM87AQ8NBN3 555 aa14.15□□□□□ -0.14
CAPRIN1-202ENST00000389645 CHAF1AQ13111 956 aaPredicted RBP14.15□□□□□ -0.14
CAPRIN1-202ENST00000389645 STOX1Q6ZVD7 989 aa14.15□□□□□ -0.14
CAPRIN1-202ENST00000389645 ZNF592Q92610 1267 aa14.15□□□□□ -0.14
CAPRIN1-202ENST00000389645 GPR108Q9NPR9 543 aa14.15□□□□□ -0.14
CAPRIN1-202ENST00000389645 ZNF500O60304 480 aaPredicted RBP14.14□□□□□ -0.15
CAPRIN1-202ENST00000389645 KINO60870 393 aaKnown RBP14.14□□□□□ -0.15
CAPRIN1-202ENST00000389645 CERS3Q8IU89 383 aa14.14□□□□□ -0.15
CAPRIN1-202ENST00000389645 BCL2L12Q9HB09 334 aa14.14□□□□□ -0.15
CAPRIN1-202ENST00000389645 CFAP45Q9UL16 551 aa14.14□□□□□ -0.15
CAPRIN1-202ENST00000389645 WTIPA6NIX2 430 aaPredicted RBP14.14□□□□□ -0.15
CAPRIN1-202ENST00000389645 HSPD1P10809 573 aaKnown RBP14.14□□□□□ -0.15
CAPRIN1-202ENST00000389645 FAM200AQ8TCP9 573 aa14.14□□□□□ -0.15
CAPRIN1-202ENST00000389645 ZNF609O15014 1411 aa14.14□□□□□ -0.15
CAPRIN1-202ENST00000389645 LRRC4BQ9NT99 713 aa14.14□□□□□ -0.15
CAPRIN1-202ENST00000389645 AKAP2Q9Y2D5 859 aa14.14□□□□□ -0.15
CAPRIN1-202ENST00000389645 RNF113AO15541 343 aaKnown RBP14.13□□□□□ -0.15
CAPRIN1-202ENST00000389645 PTGS1P23219 599 aa14.13□□□□□ -0.15
CAPRIN1-202ENST00000389645 TRDNQ13061 729 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms