RNA–Protein interactions for RNA: ENST00000381033.4

PDX1-201, Transcript of pancreatic and duodenal homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDX1, Length 2,501 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1-201ENST00000381033 DHX32Q7L7V1 743 aaKnown RBP20.33■□□□□ 0.85
PDX1-201ENST00000381033 GTF3C6Q969F1 213 aa20.33■□□□□ 0.85
PDX1-201ENST00000381033 NTSR2O95665 410 aa20.33■□□□□ 0.84
PDX1-201ENST00000381033 RRAGDQ9NQL2 400 aaPredicted RBP20.33■□□□□ 0.84
PDX1-201ENST00000381033 ISY1Q9ULR0 285 aaKnown RBP20.33■□□□□ 0.84
PDX1-201ENST00000381033 GPAA1O43292 621 aa20.32■□□□□ 0.84
PDX1-201ENST00000381033 WWC3Q9ULE0 1092 aa20.32■□□□□ 0.84
PDX1-201ENST00000381033 BCL9LQ86UU0 1499 aa20.32■□□□□ 0.84
PDX1-201ENST00000381033 EXOSC10Q01780 885 aaKnown RBP20.32■□□□□ 0.84
PDX1-201ENST00000381033 CCDC24Q8N4L8 307 aa20.32■□□□□ 0.84
PDX1-201ENST00000381033 RNF214Q8ND24 703 aa20.32■□□□□ 0.84
PDX1-201ENST00000381033 MPHOSPH8Q99549 860 aa20.32■□□□□ 0.84
PDX1-201ENST00000381033 PRDM10Q9NQV6 1147 aa20.32■□□□□ 0.84
PDX1-201ENST00000381033 TMEM51Q9NW97 253 aa20.32■□□□□ 0.84
PDX1-201ENST00000381033 MBD3O95983 291 aa20.31■□□□□ 0.84
PDX1-201ENST00000381033 RAB11FIP4Q86YS3 637 aa20.31■□□□□ 0.84
PDX1-201ENST00000381033 APPBP2Q92624 585 aa20.31■□□□□ 0.84
PDX1-201ENST00000381033 NWD2Q9ULI1 1742 aa20.31■□□□□ 0.84
PDX1-201ENST00000381033 FGFR2P21802 821 aa20.31■□□□□ 0.84
PDX1-201ENST00000381033 IQSEC3Q9UPP2 1182 aaPredicted RBP20.31■□□□□ 0.84
PDX1-201ENST00000381033 TAF1P21675 1872 aa20.31■□□□□ 0.84
PDX1-201ENST00000381033 AMIGO3Q86WK7 504 aa20.3■□□□□ 0.84
PDX1-201ENST00000381033 TFIP11Q9UBB9 837 aaKnown RBP20.3■□□□□ 0.84
PDX1-201ENST00000381033 CTDNEP1O95476 244 aa20.3■□□□□ 0.84
PDX1-201ENST00000381033 BCAMP50895 628 aa20.3■□□□□ 0.84
PDX1-201ENST00000381033 PUM3Q15397 648 aaKnown RBP20.3■□□□□ 0.84
PDX1-201ENST00000381033 ADD2P35612 726 aa20.29■□□□□ 0.84
PDX1-201ENST00000381033 RASGRF1Q13972 1273 aa20.29■□□□□ 0.84
PDX1-201ENST00000381033 LRSAM1Q6UWE0 723 aa20.29■□□□□ 0.84
PDX1-201ENST00000381033 ZNF532Q9HCE3 1301 aa20.29■□□□□ 0.84
PDX1-201ENST00000381033 ERFEQ4G0M1 354 aa20.29■□□□□ 0.84
PDX1-201ENST00000381033 LPIN2Q92539 896 aa20.29■□□□□ 0.84
PDX1-201ENST00000381033 SPEF2Q9C093 1822 aa20.28■□□□□ 0.84
PDX1-201ENST00000381033 TMEM87AQ8NBN3 555 aa20.28■□□□□ 0.84
PDX1-201ENST00000381033 INCENPQ9NQS7 918 aa20.28■□□□□ 0.84
PDX1-201ENST00000381033 ZFYP08048 801 aaPredicted RBP20.27■□□□□ 0.84
PDX1-201ENST00000381033 TTC6Q86TZ1 520 aa20.27■□□□□ 0.84
PDX1-201ENST00000381033 NBPF3Q9H094 633 aa20.27■□□□□ 0.84
PDX1-201ENST00000381033 SRP68Q9UHB9 627 aaKnown RBP20.27■□□□□ 0.84
PDX1-201ENST00000381033 MROH5Q6ZUA9 1318 aa20.27■□□□□ 0.83
PDX1-201ENST00000381033 DDX60Q8IY21 1712 aaKnown RBP20.27■□□□□ 0.83
PDX1-201ENST00000381033 KCNA4P22459 653 aa20.26■□□□□ 0.83
PDX1-201ENST00000381033 ARID4AP29374 1257 aaPredicted RBP20.26■□□□□ 0.83
PDX1-201ENST00000381033 APPP05067 770 aa20.26■□□□□ 0.83
PDX1-201ENST00000381033 PDE6AP16499 860 aa20.26■□□□□ 0.83
PDX1-201ENST00000381033 CCDC152Q4G0S7 254 aa20.26■□□□□ 0.83
PDX1-201ENST00000381033 PARP10Q53GL7 1025 aa20.26■□□□□ 0.83
PDX1-201ENST00000381033 SPATA5Q8NB90 893 aa20.26■□□□□ 0.83
PDX1-201ENST00000381033 NSUN7Q8NE18 718 aaKnown RBP20.26■□□□□ 0.83
PDX1-201ENST00000381033 ATP6V1DQ9Y5K8 247 aa20.26■□□□□ 0.83
PDX1-201ENST00000381033 MYH7P12883 1935 aa20.26■□□□□ 0.83
PDX1-201ENST00000381033 PFKFB2O60825 505 aa20.25■□□□□ 0.83
PDX1-201ENST00000381033 HMGB1P09429 215 aaKnown RBP20.25■□□□□ 0.83
PDX1-201ENST00000381033 PDIA3P30101 505 aaKnown RBP20.25■□□□□ 0.83
PDX1-201ENST00000381033 CHRNDQ07001 517 aa20.25■□□□□ 0.83
PDX1-201ENST00000381033 VPS72Q15906 364 aa20.25■□□□□ 0.83
PDX1-201ENST00000381033 IMMTQ16891 758 aaKnown RBP20.25■□□□□ 0.83
PDX1-201ENST00000381033 TBC1D9BQ66K14 1250 aa20.25■□□□□ 0.83
PDX1-201ENST00000381033 SMARCC1Q92922 1105 aaPredicted RBP20.25■□□□□ 0.83
PDX1-201ENST00000381033 UBE2HP62256 183 aa20.25■□□□□ 0.83
PDX1-201ENST00000381033 AGXT2Q9BYV1 514 aa20.25■□□□□ 0.83
PDX1-201ENST00000381033 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.25■□□□□ 0.83
PDX1-201ENST00000381033 BCL2L12Q9HB09 334 aa20.25■□□□□ 0.83
PDX1-201ENST00000381033 TCRBV5S4A2TA0A5A2 114 aa20.24■□□□□ 0.83
PDX1-201ENST00000381033 ANTXR2P58335 489 aa20.24■□□□□ 0.83
PDX1-201ENST00000381033 GUCY1B3Q02153 619 aa20.24■□□□□ 0.83
PDX1-201ENST00000381033 RGS22Q8NE09 1264 aa20.24■□□□□ 0.83
PDX1-201ENST00000381033 MAGEB6Q8N7X4 407 aa20.24■□□□□ 0.83
PDX1-201ENST00000381033 ZNF512BQ96KM6 892 aaPredicted RBP20.24■□□□□ 0.83
PDX1-201ENST00000381033 USP21Q9UK80 565 aa20.24■□□□□ 0.83
PDX1-201ENST00000381033 PTPDC1A2A3K4 754 aa20.23■□□□□ 0.83
PDX1-201ENST00000381033 SLC5A1P13866 664 aa20.23■□□□□ 0.83
PDX1-201ENST00000381033 PDCP20941 246 aa20.23■□□□□ 0.83
PDX1-201ENST00000381033 IGHMBP2P38935 993 aaKnown RBP20.23■□□□□ 0.83
PDX1-201ENST00000381033 LRRFIP1Q32MZ4 808 aaKnown RBP20.23■□□□□ 0.83
PDX1-201ENST00000381033 SLC51AQ86UW1 340 aa20.23■□□□□ 0.83
PDX1-201ENST00000381033 TBC1D10CQ8IV04 446 aa20.23■□□□□ 0.83
PDX1-201ENST00000381033 ZNF213O14771 459 aa20.23■□□□□ 0.83
PDX1-201ENST00000381033 FTOQ9C0B1 505 aaKnown RBP eCLIP20.23■□□□□ 0.83
PDX1-201ENST00000381033 ABCC12Q96J65 1359 aa20.23■□□□□ 0.83
PDX1-201ENST00000381033 PRC1O43663 620 aa20.22■□□□□ 0.83
PDX1-201ENST00000381033 CEBPZQ03701 1054 aaKnown RBP20.22■□□□□ 0.83
PDX1-201ENST00000381033 STK11IPQ8N1F8 1099 aa20.22■□□□□ 0.83
PDX1-201ENST00000381033 SMARCC2Q8TAQ2 1214 aa20.22■□□□□ 0.83
PDX1-201ENST00000381033 AK7Q96M32 723 aa20.22■□□□□ 0.83
PDX1-201ENST00000381033 LRP5O75197 1615 aa20.22■□□□□ 0.83
PDX1-201ENST00000381033 GIMAP6Q6P9H5 292 aa20.22■□□□□ 0.83
PDX1-201ENST00000381033 MB21D2Q8IYB1 491 aaPredicted RBP20.22■□□□□ 0.83
PDX1-201ENST00000381033 FAM184AQ8NB25 1140 aa20.22■□□□□ 0.83
PDX1-201ENST00000381033 CTNNA3Q9UI47 895 aa20.22■□□□□ 0.83
PDX1-201ENST00000381033 RREB1Q92766 1687 aa20.21■□□□□ 0.83
PDX1-201ENST00000381033 VGLL3A8MV65 326 aa20.21■□□□□ 0.83
PDX1-201ENST00000381033 PRKAB2O43741 272 aa20.21■□□□□ 0.83
PDX1-201ENST00000381033 GYG1P46976 350 aa20.21■□□□□ 0.83
PDX1-201ENST00000381033 TTF1Q15361 905 aaPredicted RBP20.21■□□□□ 0.83
PDX1-201ENST00000381033 ARMT1Q9H993 441 aa20.21■□□□□ 0.83
PDX1-201ENST00000381033 SENP2Q9HC62 589 aa20.21■□□□□ 0.83
PDX1-201ENST00000381033 GJB4Q9NTQ9 266 aa20.21■□□□□ 0.83
PDX1-201ENST00000381033 COL5A3P25940 1745 aaPredicted RBP20.21■□□□□ 0.83
PDX1-201ENST00000381033 H3BQV1 296 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms