RNA–Protein interactions for RNA: ENST00000378133.4

PCDHA1-201, Transcript of protocadherin alpha 1, humanhuman

BASIC

Gene PCDHA1, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-201ENST00000378133 NAA16Q6N069 864 aaPredicted RBP19.36■□□□□ 0.69
PCDHA1-201ENST00000378133 FAM53CQ9NYF3 392 aa19.36■□□□□ 0.69
PCDHA1-201ENST00000378133 RCOR1Q9UKL0 485 aa19.36■□□□□ 0.69
PCDHA1-201ENST00000378133 SLU7O95391 586 aaKnown RBP19.35■□□□□ 0.69
PCDHA1-201ENST00000378133 IFIT1P09914 478 aaKnown RBP19.35■□□□□ 0.69
PCDHA1-201ENST00000378133 IL15P40933 162 aaPredicted RBP19.35■□□□□ 0.69
PCDHA1-201ENST00000378133 MAPK8IP2Q13387 824 aaPredicted RBP19.35■□□□□ 0.69
PCDHA1-201ENST00000378133 USP28Q96RU2 1077 aa19.35■□□□□ 0.69
PCDHA1-201ENST00000378133 ZBTB3Q9H5J0 574 aa19.35■□□□□ 0.69
PCDHA1-201ENST00000378133 LAMA4Q16363 1823 aa19.35■□□□□ 0.69
PCDHA1-201ENST00000378133 CCAR2Q8N163 923 aaKnown RBP19.35■□□□□ 0.69
PCDHA1-201ENST00000378133 CCZ1BP86790 482 aa19.34■□□□□ 0.69
PCDHA1-201ENST00000378133 CCZ1P86791 482 aaPredicted RBP19.34■□□□□ 0.69
PCDHA1-201ENST00000378133 STX1AQ16623 288 aa19.34■□□□□ 0.69
PCDHA1-201ENST00000378133 TTLL5Q6EMB2 1281 aa19.34■□□□□ 0.69
PCDHA1-201ENST00000378133 AGXT2Q9BYV1 514 aa19.34■□□□□ 0.69
PCDHA1-201ENST00000378133 GOLPH3LQ9H4A5 285 aa19.34■□□□□ 0.69
PCDHA1-201ENST00000378133 LTBP4Q8N2S1 1624 aa19.34■□□□□ 0.69
PCDHA1-201ENST00000378133 A0A1B0GUL7 405 aa19.34■□□□□ 0.69
PCDHA1-201ENST00000378133 EYA2O00167 538 aa19.34■□□□□ 0.69
PCDHA1-201ENST00000378133 NPHP1O15259 732 aa19.34■□□□□ 0.69
PCDHA1-201ENST00000378133 PDIA3P30101 505 aaKnown RBP19.34■□□□□ 0.69
PCDHA1-201ENST00000378133 PUS3Q9BZE2 481 aaKnown RBP19.34■□□□□ 0.69
PCDHA1-201ENST00000378133 GPR108Q9NPR9 543 aa19.34■□□□□ 0.69
PCDHA1-201ENST00000378133 MAST3O60307 1309 aa19.34■□□□□ 0.69
PCDHA1-201ENST00000378133 A0A087WWV3 80 aa19.33■□□□□ 0.68
PCDHA1-201ENST00000378133 RNF113AO15541 343 aaKnown RBP19.33■□□□□ 0.68
PCDHA1-201ENST00000378133 SOS2Q07890 1332 aaPredicted RBP19.32■□□□□ 0.68
PCDHA1-201ENST00000378133 CTAGE5O15320 804 aa19.32■□□□□ 0.68
PCDHA1-201ENST00000378133 FKBP4Q02790 459 aaKnown RBP eCLIP19.32■□□□□ 0.68
PCDHA1-201ENST00000378133 SNW1Q13573 536 aaKnown RBP19.32■□□□□ 0.68
PCDHA1-201ENST00000378133 COL18A1P39060 1754 aa19.32■□□□□ 0.68
PCDHA1-201ENST00000378133 ERICH4A6NGS2 130 aa19.32■□□□□ 0.68
PCDHA1-201ENST00000378133 M0R2C6 588 aa19.32■□□□□ 0.68
PCDHA1-201ENST00000378133 OSBP2Q969R2 916 aa19.31■□□□□ 0.68
PCDHA1-201ENST00000378133 GPHNQ9NQX3 736 aaPredicted RBP19.31■□□□□ 0.68
PCDHA1-201ENST00000378133 NHSL1Q5SYE7 1610 aa19.31■□□□□ 0.68
PCDHA1-201ENST00000378133 KIF2AO00139 706 aaPredicted RBP19.31■□□□□ 0.68
PCDHA1-201ENST00000378133 CCDC73Q6ZRK6 1079 aa19.31■□□□□ 0.68
PCDHA1-201ENST00000378133 TIGD1Q96MW7 591 aa19.31■□□□□ 0.68
PCDHA1-201ENST00000378133 ST7Q9NRC1 585 aa19.31■□□□□ 0.68
PCDHA1-201ENST00000378133 SALL1Q9NSC2 1324 aa19.31■□□□□ 0.68
PCDHA1-201ENST00000378133 ME1P48163 572 aa19.31■□□□□ 0.68
PCDHA1-201ENST00000378133 ILDR1Q86SU0 546 aaPredicted RBP19.31■□□□□ 0.68
PCDHA1-201ENST00000378133 ZNF274Q96GC6 653 aaPredicted RBP19.31■□□□□ 0.68
PCDHA1-201ENST00000378133 ZNF396Q96N95 335 aaPredicted RBP19.31■□□□□ 0.68
PCDHA1-201ENST00000378133 DHX40Q8IX18 779 aaKnown RBP19.3■□□□□ 0.68
PCDHA1-201ENST00000378133 ERCC4Q92889 916 aaPredicted RBP19.3■□□□□ 0.68
PCDHA1-201ENST00000378133 ZNF446Q9NWS9 450 aa19.3■□□□□ 0.68
PCDHA1-201ENST00000378133 CCDC191Q8NCU4 936 aa19.3■□□□□ 0.68
PCDHA1-201ENST00000378133 KINO60870 393 aaKnown RBP19.29■□□□□ 0.68
PCDHA1-201ENST00000378133 FDPSP14324 419 aaKnown RBP19.29■□□□□ 0.68
PCDHA1-201ENST00000378133 CDK11BP21127 795 aaKnown RBP19.29■□□□□ 0.68
PCDHA1-201ENST00000378133 HAND2P61296 217 aa19.29■□□□□ 0.68
PCDHA1-201ENST00000378133 BMS1Q14692 1282 aaKnown RBP19.29■□□□□ 0.68
PCDHA1-201ENST00000378133 ENGASEQ8NFI3 743 aa19.29■□□□□ 0.68
PCDHA1-201ENST00000378133 ZFP91Q96JP5 570 aaPredicted RBP19.29■□□□□ 0.68
PCDHA1-201ENST00000378133 KCND1Q9NSA2 647 aa19.29■□□□□ 0.68
PCDHA1-201ENST00000378133 ANO10Q9NW15 660 aa19.29■□□□□ 0.68
PCDHA1-201ENST00000378133 FSIP1Q8NA03 581 aa19.29■□□□□ 0.68
PCDHA1-201ENST00000378133 CEP126Q9P2H0 1117 aa19.29■□□□□ 0.68
PCDHA1-201ENST00000378133 GSDMDP57764 484 aa19.28■□□□□ 0.68
PCDHA1-201ENST00000378133 IRX5P78411 483 aaPredicted RBP19.28■□□□□ 0.68
PCDHA1-201ENST00000378133 OTUD7BQ6GQQ9 843 aa19.28■□□□□ 0.68
PCDHA1-201ENST00000378133 CCDC85AQ96PX6 553 aaPredicted RBP19.28■□□□□ 0.68
PCDHA1-201ENST00000378133 CARMIL3Q8ND23 1372 aa19.28■□□□□ 0.68
PCDHA1-201ENST00000378133 FAM193AP78312 1265 aa19.28■□□□□ 0.68
PCDHA1-201ENST00000378133 FAM160A1Q05DH4 1040 aa19.28■□□□□ 0.68
PCDHA1-201ENST00000378133 WASHC4Q2M389 1173 aa19.28■□□□□ 0.68
PCDHA1-201ENST00000378133 ERCC6LQ2NKX8 1250 aa19.28■□□□□ 0.68
PCDHA1-201ENST00000378133 ATL3Q6DD88 541 aa19.28■□□□□ 0.68
PCDHA1-201ENST00000378133 FBXW7Q969H0 707 aa19.28■□□□□ 0.68
PCDHA1-201ENST00000378133 CALCOCO1Q9P1Z2 691 aa19.28■□□□□ 0.68
PCDHA1-201ENST00000378133 ADORA1P30542 326 aa19.27■□□□□ 0.68
PCDHA1-201ENST00000378133 GORABQ5T7V8 394 aa19.27■□□□□ 0.68
PCDHA1-201ENST00000378133 NOL10Q9BSC4 688 aaKnown RBP19.27■□□□□ 0.68
PCDHA1-201ENST00000378133 GLI3P10071 1580 aa19.27■□□□□ 0.68
PCDHA1-201ENST00000378133 CIAO1O76071 339 aa19.27■□□□□ 0.67
PCDHA1-201ENST00000378133 AOPEPQ8N6M6 819 aa19.27■□□□□ 0.67
PCDHA1-201ENST00000378133 ZCRB1Q8TBF4 217 aaKnown RBP19.27■□□□□ 0.67
PCDHA1-201ENST00000378133 PCDHA7Q9UN72 937 aa19.27■□□□□ 0.67
PCDHA1-201ENST00000378133 MYH15Q9Y2K3 1946 aa19.26■□□□□ 0.67
PCDHA1-201ENST00000378133 TICAM2Q86XR7 235 aa19.26■□□□□ 0.67
PCDHA1-201ENST00000378133 CEP57L1Q8IYX8 460 aa19.26■□□□□ 0.67
PCDHA1-201ENST00000378133 ZNF330Q9Y3S2 320 aaPredicted RBP19.26■□□□□ 0.67
PCDHA1-201ENST00000378133 CCDC57Q2TAC2 916 aa19.26■□□□□ 0.67
PCDHA1-201ENST00000378133 HSP90AB3PQ58FF7 597 aa19.26■□□□□ 0.67
PCDHA1-201ENST00000378133 CCDC158Q5M9N0 1113 aa19.26■□□□□ 0.67
PCDHA1-201ENST00000378133 TTC39AQ5SRH9 613 aa19.26■□□□□ 0.67
PCDHA1-201ENST00000378133 FOXP2O15409 715 aa19.25■□□□□ 0.67
PCDHA1-201ENST00000378133 H2AFXP16104 143 aaPredicted RBP19.25■□□□□ 0.67
PCDHA1-201ENST00000378133 RAB11FIP4Q86YS3 637 aa19.25■□□□□ 0.67
PCDHA1-201ENST00000378133 XAGE2Q96GT9 111 aa19.25■□□□□ 0.67
PCDHA1-201ENST00000378133 NAT10Q9H0A0 1025 aaKnown RBP19.25■□□□□ 0.67
PCDHA1-201ENST00000378133 L2HGDHQ9H9P8 463 aa19.25■□□□□ 0.67
PCDHA1-201ENST00000378133 ATG3Q9NT62 314 aa19.25■□□□□ 0.67
PCDHA1-201ENST00000378133 PKD1L3Q7Z443 1732 aa19.25■□□□□ 0.67
PCDHA1-201ENST00000378133 A0A1B0GVL5 298 aa19.25■□□□□ 0.67
PCDHA1-201ENST00000378133 FGAP02671 866 aa19.25■□□□□ 0.67
PCDHA1-201ENST00000378133 POLR3DP05423 398 aaPredicted RBP19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms