RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 ZRSR2Q15696 482 aaKnown RBP9.64□□□□□ -0.87
VPS36-201ENST00000378060 SEPT7Q16181 437 aaKnown RBP9.64□□□□□ -0.87
VPS36-201ENST00000378060 ANKRD18AQ8IVF6 992 aa9.64□□□□□ -0.87
VPS36-201ENST00000378060 TMTC2Q8N394 836 aa9.64□□□□□ -0.87
VPS36-201ENST00000378060 TMOD3Q9NYL9 352 aa9.64□□□□□ -0.87
VPS36-201ENST00000378060 SEC63Q9UGP8 760 aaKnown RBP9.64□□□□□ -0.87
VPS36-201ENST00000378060 USP21Q9UK80 565 aa9.64□□□□□ -0.87
VPS36-201ENST00000378060 SLIT2O94813 1529 aa9.63□□□□□ -0.87
VPS36-201ENST00000378060 AK2P54819 239 aa9.63□□□□□ -0.87
VPS36-201ENST00000378060 MICALCLQ6ZW33 695 aa9.63□□□□□ -0.87
VPS36-201ENST00000378060 CPLX3Q8WVH0 158 aa9.63□□□□□ -0.87
VPS36-201ENST00000378060 CTAGE1Q96RT6 745 aa9.63□□□□□ -0.87
VPS36-201ENST00000378060 AMPD3Q01432 767 aa9.63□□□□□ -0.87
VPS36-201ENST00000378060 FAM182BQ5T319 152 aa9.63□□□□□ -0.87
VPS36-201ENST00000378060 FAM114A1Q8IWE2 563 aa9.63□□□□□ -0.87
VPS36-201ENST00000378060 CCDC12Q8WUD4 166 aaPredicted RBP9.63□□□□□ -0.87
VPS36-201ENST00000378060 FEZ1Q99689 392 aa9.63□□□□□ -0.87
VPS36-201ENST00000378060 GTPBP4Q9BZE4 634 aaKnown RBP9.63□□□□□ -0.87
VPS36-201ENST00000378060 LDHAL6AQ6ZMR3 332 aa9.63□□□□□ -0.87
VPS36-201ENST00000378060 LUZP1Q86V48 1076 aa9.63□□□□□ -0.87
VPS36-201ENST00000378060 DNAJC25Q9H1X3 360 aa9.63□□□□□ -0.87
VPS36-201ENST00000378060 MKNK2Q9HBH9 465 aa9.63□□□□□ -0.87
VPS36-201ENST00000378060 KDRP35968 1356 aa9.63□□□□□ -0.87
VPS36-201ENST00000378060 KLF18A0A0U1RQI7 1052 aa9.62□□□□□ -0.87
VPS36-201ENST00000378060 SPDYE4A6NLX3 237 aa9.62□□□□□ -0.87
VPS36-201ENST00000378060 UQCRFS1P1P0C7P4 283 aa9.62□□□□□ -0.87
VPS36-201ENST00000378060 GTF2F1P35269 517 aaKnown RBP eCLIP9.62□□□□□ -0.87
VPS36-201ENST00000378060 NLRP5P59047 1200 aa9.62□□□□□ -0.87
VPS36-201ENST00000378060 FAM98CQ17RN3 349 aaKnown RBP9.62□□□□□ -0.87
VPS36-201ENST00000378060 TMEM266Q2M3C6 531 aa9.62□□□□□ -0.87
VPS36-201ENST00000378060 CCDC82Q8N4S0 544 aa9.62□□□□□ -0.87
VPS36-201ENST00000378060 CCDC94Q9BW85 323 aaPredicted RBP9.62□□□□□ -0.87
VPS36-201ENST00000378060 RANBP6O60518 1105 aaKnown RBP9.62□□□□□ -0.87
VPS36-201ENST00000378060 SYT1P21579 422 aa9.62□□□□□ -0.87
VPS36-201ENST00000378060 KIF5BP33176 963 aa9.62□□□□□ -0.87
VPS36-201ENST00000378060 TAX1BP1Q86VP1 789 aa9.62□□□□□ -0.87
VPS36-201ENST00000378060 TIGD1Q96MW7 591 aa9.62□□□□□ -0.87
VPS36-201ENST00000378060 ALS2CR12Q96Q35 445 aa9.62□□□□□ -0.87
VPS36-201ENST00000378060 TCP11L1Q9NUJ3 509 aa9.62□□□□□ -0.87
VPS36-201ENST00000378060 CHPF2Q9P2E5 772 aa9.62□□□□□ -0.87
VPS36-201ENST00000378060 SRCAPQ6ZRS2 3230 aa9.62□□□□□ -0.87
VPS36-201ENST00000378060 CRB1P82279 1406 aa9.62□□□□□ -0.87
VPS36-201ENST00000378060 TUBBP07437 444 aa9.62□□□□□ -0.87
VPS36-201ENST00000378060 CETN2P41208 172 aa9.62□□□□□ -0.87
VPS36-201ENST00000378060 MICU3Q86XE3 530 aa9.62□□□□□ -0.87
VPS36-201ENST00000378060 RMND1Q9NWS8 449 aa9.62□□□□□ -0.87
VPS36-201ENST00000378060 TRMT112Q9UI30 125 aaKnown RBP9.62□□□□□ -0.87
VPS36-201ENST00000378060 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.62□□□□□ -0.876e-6■□□□□ 9.1
VPS36-201ENST00000378060 AOX1Q06278 1338 aa9.62□□□□□ -0.87
VPS36-201ENST00000378060 N4BP3O15049 544 aa9.62□□□□□ -0.87
VPS36-201ENST00000378060 UBA7P41226 1012 aa9.62□□□□□ -0.87
VPS36-201ENST00000378060 MFSD6Q6ZSS7 791 aa9.62□□□□□ -0.87
VPS36-201ENST00000378060 DNAI1Q9UI46 699 aa9.62□□□□□ -0.87
VPS36-201ENST00000378060 ZBTB43O43298 467 aa9.61□□□□□ -0.87
VPS36-201ENST00000378060 HMGB2P26583 209 aaKnown RBP9.61□□□□□ -0.87
VPS36-201ENST00000378060 IL15P40933 162 aaPredicted RBP9.61□□□□□ -0.87
VPS36-201ENST00000378060 MTIF2P46199 727 aaKnown RBP9.61□□□□□ -0.87
VPS36-201ENST00000378060 DDX46Q7L014 1031 aaKnown RBP9.61□□□□□ -0.87
VPS36-201ENST00000378060 UNC5CLQ8IV45 518 aa9.61□□□□□ -0.87
VPS36-201ENST00000378060 PIBF1Q8WXW3 757 aa9.61□□□□□ -0.87
VPS36-201ENST00000378060 BABAM1Q9NWV8 329 aa9.61□□□□□ -0.87
VPS36-201ENST00000378060 TRIM35Q9UPQ4 493 aa9.61□□□□□ -0.87
VPS36-201ENST00000378060 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.61□□□□□ -0.87
VPS36-201ENST00000378060 Q6ZUG5 572 aa9.61□□□□□ -0.87
VPS36-201ENST00000378060 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.61□□□□□ -0.87
VPS36-201ENST00000378060 RRAGDQ9NQL2 400 aaPredicted RBP9.61□□□□□ -0.87
VPS36-201ENST00000378060 SPTLC2O15270 562 aa9.61□□□□□ -0.87
VPS36-201ENST00000378060 NBPF7P0C2Y1 421 aaPredicted RBP9.61□□□□□ -0.87
VPS36-201ENST00000378060 USP5P45974 858 aa9.61□□□□□ -0.87
VPS36-201ENST00000378060 HAND2P61296 217 aa9.61□□□□□ -0.87
VPS36-201ENST00000378060 CKAP4Q07065 602 aaKnown RBP9.61□□□□□ -0.87
VPS36-201ENST00000378060 CREB3L3Q68CJ9 461 aa9.61□□□□□ -0.87
VPS36-201ENST00000378060 AOPEPQ8N6M6 819 aa9.61□□□□□ -0.87
VPS36-201ENST00000378060 ALG1Q9BT22 464 aa9.61□□□□□ -0.87
VPS36-201ENST00000378060 RBSNQ9H1K0 784 aa9.61□□□□□ -0.87
VPS36-201ENST00000378060 CNNM2Q9H8M5 875 aa9.61□□□□□ -0.87
VPS36-201ENST00000378060 ENOX2Q16206 610 aaKnown RBP9.6□□□□□ -0.87
VPS36-201ENST00000378060 AKAP4Q5JQC9 854 aa9.6□□□□□ -0.87
VPS36-201ENST00000378060 RUFY3Q7L099 469 aa9.6□□□□□ -0.87
VPS36-201ENST00000378060 ZNF444Q8N0Y2 327 aaPredicted RBP9.6□□□□□ -0.87
VPS36-201ENST00000378060 TCEANC2Q96MN5 208 aa9.6□□□□□ -0.87
VPS36-201ENST00000378060 SLC26A6Q9BXS9 759 aa9.6□□□□□ -0.87
VPS36-201ENST00000378060 KRT23Q9C075 422 aa9.6□□□□□ -0.87
VPS36-201ENST00000378060 SNRKQ9NRH2 765 aa9.6□□□□□ -0.87
VPS36-201ENST00000378060 ZHX1Q9UKY1 873 aaPredicted RBP9.6□□□□□ -0.87
VPS36-201ENST00000378060 NWD2Q9ULI1 1742 aa9.6□□□□□ -0.87
VPS36-201ENST00000378060 ANXA1P04083 346 aa9.6□□□□□ -0.87
VPS36-201ENST00000378060 BRAPQ7Z569 592 aa9.6□□□□□ -0.87
VPS36-201ENST00000378060 SEPT11Q9NVA2 429 aaKnown RBP9.6□□□□□ -0.87
VPS36-201ENST00000378060 ZNF76P36508 570 aa9.6□□□□□ -0.87
VPS36-201ENST00000378060 NMIQ13287 307 aaPredicted RBP9.6□□□□□ -0.87
VPS36-201ENST00000378060 TDRD12Q587J7 1177 aaKnown RBP9.6□□□□□ -0.87
VPS36-201ENST00000378060 LRRC27Q9C0I9 530 aa9.6□□□□□ -0.87
VPS36-201ENST00000378060 LGR6Q9HBX8 967 aa9.6□□□□□ -0.87
VPS36-201ENST00000378060 KAT6BQ8WYB5 2073 aa9.6□□□□□ -0.87
VPS36-201ENST00000378060 SHANK3Q9BYB0 1731 aa9.6□□□□□ -0.87
VPS36-201ENST00000378060 SPATA31A1Q5TZJ5 1347 aa9.6□□□□□ -0.87
VPS36-201ENST00000378060 VIRMAQ69YN4 1812 aaKnown RBP9.6□□□□□ -0.87
VPS36-201ENST00000378060 GOLGB1Q14789 3259 aaKnown RBP9.6□□□□□ -0.87
VPS36-201ENST00000378060 ATP5J2-PTCD1G3V325 749 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms