RNA–Protein interactions for RNA: ENST00000377327.8

CRNKL1-201, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-201ENST00000377327 SCLT1Q96NL6 688 aa10.3□□□□□ -0.76
CRNKL1-201ENST00000377327 PYM1Q9BRP8 204 aaKnown RBP10.3□□□□□ -0.76
CRNKL1-201ENST00000377327 CCDC113Q9H0I3 377 aa10.3□□□□□ -0.76
CRNKL1-201ENST00000377327 NFE2L3Q9Y4A8 694 aa10.3□□□□□ -0.76
CRNKL1-201ENST00000377327 PRDM15P57071 1507 aaPredicted RBP10.3□□□□□ -0.76
CRNKL1-201ENST00000377327 PRC1O43663 620 aa10.3□□□□□ -0.76
CRNKL1-201ENST00000377327 ARHGAP25P42331 645 aa10.3□□□□□ -0.76
CRNKL1-201ENST00000377327 ARID5BQ14865 1188 aa10.3□□□□□ -0.76
CRNKL1-201ENST00000377327 MPRIPQ6WCQ1 1025 aa10.3□□□□□ -0.76
CRNKL1-201ENST00000377327 USHBP1Q8N6Y0 703 aa10.3□□□□□ -0.76
CRNKL1-201ENST00000377327 FBXO18Q8NFZ0 1043 aa10.3□□□□□ -0.76
CRNKL1-201ENST00000377327 RABEP2Q9H5N1 569 aa10.3□□□□□ -0.76
CRNKL1-201ENST00000377327 KIAA0232Q92628 1395 aa10.3□□□□□ -0.76
CRNKL1-201ENST00000377327 LRRIQ1Q96JM4 1722 aa10.29□□□□□ -0.76
CRNKL1-201ENST00000377327 GOLGA6BA6NDN3 693 aa10.29□□□□□ -0.76
CRNKL1-201ENST00000377327 ZBTB43O43298 467 aa10.29□□□□□ -0.76
CRNKL1-201ENST00000377327 CCDC122Q5T0U0 273 aa10.29□□□□□ -0.76
CRNKL1-201ENST00000377327 CFAP58Q5T655 872 aa10.29□□□□□ -0.76
CRNKL1-201ENST00000377327 KSR2Q6VAB6 950 aa10.29□□□□□ -0.76
CRNKL1-201ENST00000377327 FCHSD1Q86WN1 690 aa10.29□□□□□ -0.76
CRNKL1-201ENST00000377327 SSH3Q8TE77 659 aa10.29□□□□□ -0.76
CRNKL1-201ENST00000377327 NCOA5Q9HCD5 579 aaKnown RBP10.29□□□□□ -0.76
CRNKL1-201ENST00000377327 EIF4G3O43432 1585 aaKnown RBP10.29□□□□□ -0.76
CRNKL1-201ENST00000377327 KIAA0556O60303 1618 aa10.29□□□□□ -0.76
CRNKL1-201ENST00000377327 ZNF608Q9ULD9 1512 aaPredicted RBP10.29□□□□□ -0.76
CRNKL1-201ENST00000377327 RAPGEF3O95398 923 aa10.29□□□□□ -0.76
CRNKL1-201ENST00000377327 RBM6P78332 1123 aaKnown RBP10.29□□□□□ -0.76
CRNKL1-201ENST00000377327 ADCK5Q3MIX3 580 aa10.29□□□□□ -0.76
CRNKL1-201ENST00000377327 MSL1Q68DK7 614 aa10.29□□□□□ -0.76
CRNKL1-201ENST00000377327 SARM1Q6SZW1 724 aa10.29□□□□□ -0.76
CRNKL1-201ENST00000377327 KRI1Q8N9T8 703 aaKnown RBP10.29□□□□□ -0.76
CRNKL1-201ENST00000377327 MLKLQ8NB16 471 aa10.29□□□□□ -0.76
CRNKL1-201ENST00000377327 ADAM21Q9UKJ8 722 aa10.29□□□□□ -0.76
CRNKL1-201ENST00000377327 LUC7L2Q9Y383 392 aaKnown RBP10.29□□□□□ -0.76
CRNKL1-201ENST00000377327 SLFN14P0C7P3 912 aa10.29□□□□□ -0.76
CRNKL1-201ENST00000377327 LIG3P49916 1009 aa10.29□□□□□ -0.76
CRNKL1-201ENST00000377327 ADKP55263 362 aaKnown RBP10.29□□□□□ -0.76
CRNKL1-201ENST00000377327 NAA25Q14CX7 972 aa10.29□□□□□ -0.76
CRNKL1-201ENST00000377327 SNRKQ9NRH2 765 aa10.29□□□□□ -0.76
CRNKL1-201ENST00000377327 KCNH3Q9ULD8 1083 aa10.29□□□□□ -0.76
CRNKL1-201ENST00000377327 UBE3BQ7Z3V4 1068 aa10.28□□□□□ -0.76
CRNKL1-201ENST00000377327 PLA2G4DQ86XP0 818 aa10.28□□□□□ -0.76
CRNKL1-201ENST00000377327 TMTC1Q8IUR5 882 aa10.28□□□□□ -0.76
CRNKL1-201ENST00000377327 EFCAB13Q8IY85 973 aa10.28□□□□□ -0.76
CRNKL1-201ENST00000377327 LINS1Q8NG48 757 aa10.28□□□□□ -0.76
CRNKL1-201ENST00000377327 RMND1Q9NWS8 449 aa10.28□□□□□ -0.76
CRNKL1-201ENST00000377327 KDM5AP29375 1690 aaKnown RBP10.28□□□□□ -0.76
CRNKL1-201ENST00000377327 ERVK-7P63135 1459 aa10.28□□□□□ -0.76
CRNKL1-201ENST00000377327 CLASP1Q7Z460 1538 aa10.28□□□□□ -0.76
CRNKL1-201ENST00000377327 PPFIA1Q13136 1202 aa10.28□□□□□ -0.76
CRNKL1-201ENST00000377327 DHX58Q96C10 678 aa10.28□□□□□ -0.76
CRNKL1-201ENST00000377327 RSRC1Q96IZ7 334 aaKnown RBP10.28□□□□□ -0.76
CRNKL1-201ENST00000377327 TRIM47Q96LD4 638 aa10.28□□□□□ -0.76
CRNKL1-201ENST00000377327 PARD6BQ9BYG5 372 aa10.28□□□□□ -0.76
CRNKL1-201ENST00000377327 PLCH2O75038 1416 aa10.28□□□□□ -0.76
CRNKL1-201ENST00000377327 CYP2C19P33261 490 aa10.28□□□□□ -0.76
CRNKL1-201ENST00000377327 OTUD7BQ6GQQ9 843 aa10.28□□□□□ -0.76
CRNKL1-201ENST00000377327 STX10O60499 249 aa10.28□□□□□ -0.76
CRNKL1-201ENST00000377327 FGFR1OPO95684 399 aaKnown RBP10.28□□□□□ -0.76
CRNKL1-201ENST00000377327 GIGYF2Q6Y7W6 1299 aaKnown RBP10.28□□□□□ -0.76
CRNKL1-201ENST00000377327 SRGAP1Q7Z6B7 1085 aa10.28□□□□□ -0.76
CRNKL1-201ENST00000377327 DESI2Q9BSY9 194 aa10.28□□□□□ -0.76
CRNKL1-201ENST00000377327 USP44Q9H0E7 712 aa10.28□□□□□ -0.76
CRNKL1-201ENST00000377327 ADGBQ8N7X0 1667 aa10.27□□□□□ -0.76
CRNKL1-201ENST00000377327 ADGRL1O94910 1474 aa10.27□□□□□ -0.76
CRNKL1-201ENST00000377327 A0A087WUV0 522 aaPredicted RBP10.27□□□□□ -0.76
CRNKL1-201ENST00000377327 BMP15O95972 392 aa10.27□□□□□ -0.76
CRNKL1-201ENST00000377327 KRT18P05783 430 aaKnown RBP10.27□□□□□ -0.76
CRNKL1-201ENST00000377327 MAGEA9P43362 315 aa10.27□□□□□ -0.76
CRNKL1-201ENST00000377327 WHAMMP3Q1A5X7 153 aa10.27□□□□□ -0.76
CRNKL1-201ENST00000377327 CCDC144BQ3MJ40 725 aa10.27□□□□□ -0.76
CRNKL1-201ENST00000377327 AMOTQ4VCS5 1084 aa10.27□□□□□ -0.76
CRNKL1-201ENST00000377327 CPLX4Q7Z7G2 160 aa10.27□□□□□ -0.76
CRNKL1-201ENST00000377327 FAM114A1Q8IWE2 563 aa10.27□□□□□ -0.76
CRNKL1-201ENST00000377327 CCDC42Q96M95 316 aa10.27□□□□□ -0.76
CRNKL1-201ENST00000377327 BMP2KQ9NSY1 1161 aaPredicted RBP10.27□□□□□ -0.76
CRNKL1-201ENST00000377327 ZFYP08048 801 aaPredicted RBP10.27□□□□□ -0.77
CRNKL1-201ENST00000377327 TATP17735 454 aaPredicted RBP10.27□□□□□ -0.77
CRNKL1-201ENST00000377327 UBXN1Q04323 297 aa10.27□□□□□ -0.77
CRNKL1-201ENST00000377327 CYP26C1Q6V0L0 522 aa10.27□□□□□ -0.77
CRNKL1-201ENST00000377327 BCAS4Q8TDM0 211 aa10.27□□□□□ -0.77
CRNKL1-201ENST00000377327 FAN1Q9Y2M0 1017 aa10.27□□□□□ -0.77
CRNKL1-201ENST00000377327 SSBP05455 408 aaKnown RBP eCLIP10.27□□□□□ -0.77
CRNKL1-201ENST00000377327 NBPF7P0C2Y1 421 aaPredicted RBP10.27□□□□□ -0.77
CRNKL1-201ENST00000377327 E2F4Q16254 413 aa10.27□□□□□ -0.77
CRNKL1-201ENST00000377327 CCDC85AQ96PX6 553 aaPredicted RBP10.27□□□□□ -0.77
CRNKL1-201ENST00000377327 ZCCHC17Q9NP64 241 aaKnown RBP10.27□□□□□ -0.77
CRNKL1-201ENST00000377327 CDC23Q9UJX2 597 aa10.27□□□□□ -0.77
CRNKL1-201ENST00000377327 TTC21AQ8NDW8 1320 aa10.27□□□□□ -0.77
CRNKL1-201ENST00000377327 LARGE1O95461 756 aa10.26□□□□□ -0.77
CRNKL1-201ENST00000377327 CCDC172P0C7W6 258 aa10.26□□□□□ -0.77
CRNKL1-201ENST00000377327 ANKS4BQ8N8V4 417 aa10.26□□□□□ -0.77
CRNKL1-201ENST00000377327 FAM204AQ9H8W3 233 aa10.26□□□□□ -0.77
CRNKL1-201ENST00000377327 GOPCQ9HD26 462 aa10.26□□□□□ -0.77
CRNKL1-201ENST00000377327 PCDHA7Q9UN72 937 aa10.26□□□□□ -0.77
CRNKL1-201ENST00000377327 CAPN7Q9Y6W3 813 aa10.26□□□□□ -0.77
CRNKL1-201ENST00000377327 NEFHP12036 1026 aa10.26□□□□□ -0.77
CRNKL1-201ENST00000377327 METTL24Q5JXM2 366 aa10.26□□□□□ -0.77
CRNKL1-201ENST00000377327 ANKRD18AQ8IVF6 992 aa10.26□□□□□ -0.77
CRNKL1-201ENST00000377327 PAG1Q9NWQ8 432 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms