RNA–Protein interactions for RNA: ENST00000377107.6

USP11-204, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP11, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-204ENST00000377107 STARD3NLO95772 234 aa15.07■□□□□ 0
USP11-204ENST00000377107 PDIA4P13667 645 aaKnown RBP15.07■□□□□ 0
USP11-204ENST00000377107 TPM3P06753 285 aa15.07■□□□□ 0
USP11-204ENST00000377107 SPECC1Q5M775 1068 aa15.07■□□□□ 0
USP11-204ENST00000377107 PPP4R3BQ5MIZ7 849 aa15.07■□□□□ 0
USP11-204ENST00000377107 ZSCAN25Q6NSZ9 544 aa15.07■□□□□ 0
USP11-204ENST00000377107 AIDAQ96BJ3 306 aa15.07■□□□□ 0
USP11-204ENST00000377107 NDUFA8P51970 172 aa15.06■□□□□ 0
USP11-204ENST00000377107 MRPS27Q92552 414 aaKnown RBP15.06■□□□□ 0
USP11-204ENST00000377107 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.06■□□□□ 0
USP11-204ENST00000377107 SH3TC1Q8TE82 1336 aa15.06■□□□□ 0
USP11-204ENST00000377107 DHX16O60231 1041 aaKnown RBP15.06■□□□□ 0
USP11-204ENST00000377107 CMTR1Q8N1G2 835 aaKnown RBP15.06■□□□□ 0
USP11-204ENST00000377107 ANO10Q9NW15 660 aa15.06■□□□□ 0
USP11-204ENST00000377107 NAA30Q147X3 362 aaPredicted RBP15.06■□□□□ 0
USP11-204ENST00000377107 NUP133Q8WUM0 1156 aa15.06■□□□□ 0
USP11-204ENST00000377107 PRIMPOLQ96LW4 560 aa15.06■□□□□ 0
USP11-204ENST00000377107 BCL2L12Q9HB09 334 aa15.06■□□□□ 0
USP11-204ENST00000377107 SPATA31A3Q5VYP0 1347 aa15.06■□□□□ 0
USP11-204ENST00000377107 ANKRD18BA2A2Z9 1011 aa15.05■□□□□ 0
USP11-204ENST00000377107 IRS4O14654 1257 aaPredicted RBP15.05■□□□□ 0
USP11-204ENST00000377107 IGSF3O75054 1194 aa15.05■□□□□ 0
USP11-204ENST00000377107 SKILP12757 684 aa15.05■□□□□ 0
USP11-204ENST00000377107 LMOD1P29536 600 aaPredicted RBP15.05■□□□□ 0
USP11-204ENST00000377107 FAM160A1Q05DH4 1040 aa15.05■□□□□ -0
USP11-204ENST00000377107 BRINP3Q76B58 766 aa15.05■□□□□ -0
USP11-204ENST00000377107 CARMIL3Q8ND23 1372 aa15.05■□□□□ -0
USP11-204ENST00000377107 SPTLC2O15270 562 aa15.05■□□□□ -0
USP11-204ENST00000377107 METAP2P50579 478 aaKnown RBP eCLIP15.05■□□□□ -0
USP11-204ENST00000377107 TERF1P54274 439 aa15.05■□□□□ -0
USP11-204ENST00000377107 EXOSC10Q01780 885 aaKnown RBP15.05■□□□□ -0
USP11-204ENST00000377107 TRIM29Q14134 588 aa15.05■□□□□ -0
USP11-204ENST00000377107 NAA16Q6N069 864 aaPredicted RBP15.05■□□□□ -0
USP11-204ENST00000377107 LLPHQ9BRT6 129 aaKnown RBP15.05■□□□□ -0
USP11-204ENST00000377107 ALG1Q9BT22 464 aa15.05■□□□□ -0
USP11-204ENST00000377107 PHKA1P46020 1223 aa15.04■□□□□ -0
USP11-204ENST00000377107 CPLX2Q6PUV4 134 aaKnown RBP15.04■□□□□ -0
USP11-204ENST00000377107 ACSBG1Q96GR2 724 aa15.04■□□□□ -0
USP11-204ENST00000377107 MAP7D2Q96T17 732 aa15.04■□□□□ -0
USP11-204ENST00000377107 BTG4Q9NY30 223 aa15.04■□□□□ -0
USP11-204ENST00000377107 ABCF2Q9UG63 623 aa15.04■□□□□ -0
USP11-204ENST00000377107 SLC3A2P08195 630 aaKnown RBP15.04■□□□□ -0
USP11-204ENST00000377107 FDPSP14324 419 aaKnown RBP15.04■□□□□ -0
USP11-204ENST00000377107 MCAMP43121 646 aa15.04■□□□□ -0
USP11-204ENST00000377107 CTDSPL2Q05D32 466 aa15.04■□□□□ -0
USP11-204ENST00000377107 PDCL2Q8N4E4 241 aa15.04■□□□□ -0
USP11-204ENST00000377107 MIGA1Q8NAN2 632 aa15.04■□□□□ -0
USP11-204ENST00000377107 SMARCC2Q8TAQ2 1214 aa15.04■□□□□ -0
USP11-204ENST00000377107 PIGBQ92521 554 aa15.04■□□□□ -0
USP11-204ENST00000377107 APPBP2Q92624 585 aa15.04■□□□□ -0
USP11-204ENST00000377107 MPHOSPH8Q99549 860 aa15.04■□□□□ -0
USP11-204ENST00000377107 RCOR1Q9UKL0 485 aa15.04■□□□□ -0
USP11-204ENST00000377107 WDR17Q8IZU2 1322 aa15.04■□□□□ -0
USP11-204ENST00000377107 UBE2Q2LH0YL09 131 aa15.04■□□□□ -0
USP11-204ENST00000377107 TMC6Q7Z403 805 aa15.04■□□□□ -0
USP11-204ENST00000377107 CREBRFQ8IUR6 639 aa15.04■□□□□ -0
USP11-204ENST00000377107 FAM177A1Q8N128 213 aaPredicted RBP15.04■□□□□ -0
USP11-204ENST00000377107 NAT10Q9H0A0 1025 aaKnown RBP15.04■□□□□ -0
USP11-204ENST00000377107 ERVV-2B6SEH9 535 aa15.03■□□□□ -0
USP11-204ENST00000377107 CCDC112Q8NEF3 446 aa15.03■□□□□ -0
USP11-204ENST00000377107 SLC26A6Q9BXS9 759 aa15.03■□□□□ -0
USP11-204ENST00000377107 SENP2Q9HC62 589 aa15.03■□□□□ -0
USP11-204ENST00000377107 MED1Q15648 1581 aaPredicted RBP15.03■□□□□ -0
USP11-204ENST00000377107 ZNF532Q9HCE3 1301 aa15.03■□□□□ -0
USP11-204ENST00000377107 CCDC69A6NI79 296 aa15.03■□□□□ -0
USP11-204ENST00000377107 SLC4A8Q2Y0W8 1093 aa15.03■□□□□ -0
USP11-204ENST00000377107 DPCR1Q3MIW9 517 aa15.03■□□□□ -0
USP11-204ENST00000377107 PDILTQ8N807 584 aa15.03■□□□□ -0
USP11-204ENST00000377107 MARF1Q9Y4F3 1742 aaKnown RBP15.03■□□□□ -0
USP11-204ENST00000377107 MINDY4BA8MYZ0 360 aa15.03■□□□□ -0
USP11-204ENST00000377107 IFIT3O14879 490 aaKnown RBP15.03■□□□□ -0
USP11-204ENST00000377107 TMEM67Q5HYA8 995 aa15.03■□□□□ -0
USP11-204ENST00000377107 NAPBQ9H115 298 aa15.03■□□□□ -0
USP11-204ENST00000377107 IFNKQ9P0W0 207 aa15.03■□□□□ -0
USP11-204ENST00000377107 ZBTB1Q9Y2K1 713 aa15.03■□□□□ -0
USP11-204ENST00000377107 KDM3BQ7LBC6 1761 aa15.02■□□□□ -0
USP11-204ENST00000377107 TDO2P48775 406 aa15.02■□□□□ -0
USP11-204ENST00000377107 TDRD7Q8NHU6 1098 aaKnown RBP15.02■□□□□ -0
USP11-204ENST00000377107 ZNF274Q96GC6 653 aaPredicted RBP15.02■□□□□ -0
USP11-204ENST00000377107 WWC3Q9ULE0 1092 aa15.02■□□□□ -0
USP11-204ENST00000377107 MAGEB6Q8N7X4 407 aa15.02□□□□□ -0.01
USP11-204ENST00000377107 CLIC6Q96NY7 704 aa15.02□□□□□ -0.01
USP11-204ENST00000377107 ALDH8A1Q9H2A2 487 aaPredicted RBP15.02□□□□□ -0.01
USP11-204ENST00000377107 ARMT1Q9H993 441 aa15.02□□□□□ -0.01
USP11-204ENST00000377107 SLAIN2Q9P270 581 aa15.02□□□□□ -0.01
USP11-204ENST00000377107 USP27XA6NNY8 438 aa15.01□□□□□ -0.01
USP11-204ENST00000377107 GOLGA8AA7E2F4 631 aa15.01□□□□□ -0.01
USP11-204ENST00000377107 CTAGE5O15320 804 aa15.01□□□□□ -0.01
USP11-204ENST00000377107 HOMER1Q86YM7 354 aa15.01□□□□□ -0.01
USP11-204ENST00000377107 TMX1Q9H3N1 280 aa15.01□□□□□ -0.01
USP11-204ENST00000377107 PIH1D3Q9NQM4 214 aaKnown RBP15.01□□□□□ -0.01
USP11-204ENST00000377107 RGPD5Q99666 1765 aa15.01□□□□□ -0.01
USP11-204ENST00000377107 KIF28PB7ZC32 967 aa15.01□□□□□ -0.01
USP11-204ENST00000377107 MYSM1Q5VVJ2 828 aa15.01□□□□□ -0.01
USP11-204ENST00000377107 BICDL1Q6ZP65 573 aa15.01□□□□□ -0.01
USP11-204ENST00000377107 hCG_1642624A0A1W2PR95 340 aa15.01□□□□□ -0.01
USP11-204ENST00000377107 ZFYP08048 801 aaPredicted RBP15.01□□□□□ -0.01
USP11-204ENST00000377107 U2AF2P26368 475 aaKnown RBP eCLIP15.01□□□□□ -0.015e-8■■■□□ 19.2
USP11-204ENST00000377107 LRP2BPQ9P2M1 347 aa15.01□□□□□ -0.01
USP11-204ENST00000377107 MTMR7Q9Y216 660 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms