RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 GTF2F1P35269 517 aaKnown RBP eCLIP16.63■□□□□ 0.257e-7■■■■■ 41.3
TNFRSF1B-201ENST00000376259 ARHGAP29Q52LW3 1261 aa16.63■□□□□ 0.25
TNFRSF1B-201ENST00000376259 ARGLU1Q9NWB6 273 aaPredicted RBP16.63■□□□□ 0.25
TNFRSF1B-201ENST00000376259 GPAA1O43292 621 aa16.63■□□□□ 0.25
TNFRSF1B-201ENST00000376259 TRIM22Q8IYM9 498 aa16.63■□□□□ 0.25
TNFRSF1B-201ENST00000376259 JAG2Q9Y219 1238 aa16.63■□□□□ 0.25
TNFRSF1B-201ENST00000376259 FGAP02671 866 aa16.62■□□□□ 0.25
TNFRSF1B-201ENST00000376259 PNOCQ13519 176 aa16.62■□□□□ 0.25
TNFRSF1B-201ENST00000376259 OSBP2Q969R2 916 aa16.62■□□□□ 0.25
TNFRSF1B-201ENST00000376259 TMOD3Q9NYL9 352 aa16.62■□□□□ 0.25
TNFRSF1B-201ENST00000376259 RAI14Q9P0K7 980 aa16.62■□□□□ 0.25
TNFRSF1B-201ENST00000376259 KCNJ14Q9UNX9 436 aa16.62■□□□□ 0.25
TNFRSF1B-201ENST00000376259 RAD21O60216 631 aa16.62■□□□□ 0.25
TNFRSF1B-201ENST00000376259 GPIHBP1Q8IV16 184 aa16.62■□□□□ 0.25
TNFRSF1B-201ENST00000376259 ATP1A3P13637 1013 aa16.61■□□□□ 0.25
TNFRSF1B-201ENST00000376259 PHKG2P15735 406 aa16.61■□□□□ 0.25
TNFRSF1B-201ENST00000376259 TNNT3P45378 269 aaPredicted RBP16.61■□□□□ 0.25
TNFRSF1B-201ENST00000376259 DHX8Q14562 1220 aaKnown RBP16.61■□□□□ 0.25
TNFRSF1B-201ENST00000376259 CCDC34Q96HJ3 373 aa16.61■□□□□ 0.25
TNFRSF1B-201ENST00000376259 TCHHQ07283 1943 aa16.61■□□□□ 0.25
TNFRSF1B-201ENST00000376259 M0R2C6 588 aa16.61■□□□□ 0.25
TNFRSF1B-201ENST00000376259 PDIA4P13667 645 aaKnown RBP16.61■□□□□ 0.25
TNFRSF1B-201ENST00000376259 ZBTB43O43298 467 aa16.61■□□□□ 0.25
TNFRSF1B-201ENST00000376259 RANBP6O60518 1105 aaKnown RBP16.61■□□□□ 0.25
TNFRSF1B-201ENST00000376259 SLU7O95391 586 aaKnown RBP16.61■□□□□ 0.25
TNFRSF1B-201ENST00000376259 SMAP1Q8IYB5 467 aaPredicted RBP16.61■□□□□ 0.25
TNFRSF1B-201ENST00000376259 HAUS7Q99871 368 aa16.61■□□□□ 0.25
TNFRSF1B-201ENST00000376259 HOOK1Q9UJC3 728 aaKnown RBP16.61■□□□□ 0.25
TNFRSF1B-201ENST00000376259 SART3Q15020 963 aaKnown RBP16.6■□□□□ 0.25
TNFRSF1B-201ENST00000376259 UBAC1Q9BSL1 405 aa16.6■□□□□ 0.25
TNFRSF1B-201ENST00000376259 LZTFL1Q9NQ48 299 aa16.6■□□□□ 0.25
TNFRSF1B-201ENST00000376259 AKAP2Q9Y2D5 859 aa16.6■□□□□ 0.25
TNFRSF1B-201ENST00000376259 TMEM131LA2VDJ0 1609 aa16.6■□□□□ 0.25
TNFRSF1B-201ENST00000376259 MAST3O60307 1309 aa16.6■□□□□ 0.25
TNFRSF1B-201ENST00000376259 CTDSPL2Q05D32 466 aa16.6■□□□□ 0.25
TNFRSF1B-201ENST00000376259 TMCO3Q6UWJ1 677 aa16.6■□□□□ 0.25
TNFRSF1B-201ENST00000376259 KCNG4Q8TDN1 519 aa16.6■□□□□ 0.25
TNFRSF1B-201ENST00000376259 COPRSQ9NQ92 184 aa16.6■□□□□ 0.25
TNFRSF1B-201ENST00000376259 ZCRB1Q8TBF4 217 aaKnown RBP16.6■□□□□ 0.25
TNFRSF1B-201ENST00000376259 PRDM1O75626 825 aa16.59■□□□□ 0.25
TNFRSF1B-201ENST00000376259 ANO1Q5XXA6 986 aa16.59■□□□□ 0.25
TNFRSF1B-201ENST00000376259 CCDC102BQ68D86 513 aa16.59■□□□□ 0.25
TNFRSF1B-201ENST00000376259 PLBD2Q8NHP8 589 aa16.59■□□□□ 0.25
TNFRSF1B-201ENST00000376259 DCAF5Q96JK2 942 aa16.59■□□□□ 0.25
TNFRSF1B-201ENST00000376259 USP31Q70CQ4 1352 aa16.59■□□□□ 0.25
TNFRSF1B-201ENST00000376259 PFKFB2O60825 505 aa16.59■□□□□ 0.25
TNFRSF1B-201ENST00000376259 NCBP1Q09161 790 aaKnown RBP16.59■□□□□ 0.25
TNFRSF1B-201ENST00000376259 PLEKHG1Q9ULL1 1385 aa16.59■□□□□ 0.25
TNFRSF1B-201ENST00000376259 GSDMDP57764 484 aa16.59■□□□□ 0.25
TNFRSF1B-201ENST00000376259 FANCCQ00597 558 aa16.59■□□□□ 0.25
TNFRSF1B-201ENST00000376259 TDRD7Q8NHU6 1098 aaKnown RBP16.59■□□□□ 0.25
TNFRSF1B-201ENST00000376259 DENND2AQ9ULE3 1009 aa16.59■□□□□ 0.25
TNFRSF1B-201ENST00000376259 EPB41L2O43491 1005 aaKnown RBP16.58■□□□□ 0.25
TNFRSF1B-201ENST00000376259 MYSM1Q5VVJ2 828 aa16.58■□□□□ 0.25
TNFRSF1B-201ENST00000376259 PPFIBP1Q86W92 1011 aa16.58■□□□□ 0.25
TNFRSF1B-201ENST00000376259 PUS7LQ9H0K6 701 aaKnown RBP16.58■□□□□ 0.25
TNFRSF1B-201ENST00000376259 MAPK8IP1Q9UQF2 711 aa16.58■□□□□ 0.25
TNFRSF1B-201ENST00000376259 PFKFB1P16118 471 aa16.58■□□□□ 0.24
TNFRSF1B-201ENST00000376259 HSPA2P54652 639 aa16.58■□□□□ 0.24
TNFRSF1B-201ENST00000376259 MTX1Q13505 466 aa16.58■□□□□ 0.24
TNFRSF1B-201ENST00000376259 DESI2Q9BSY9 194 aa16.58■□□□□ 0.24
TNFRSF1B-201ENST00000376259 CARD6Q9BX69 1037 aa16.58■□□□□ 0.24
TNFRSF1B-201ENST00000376259 EPC1Q9H2F5 836 aa16.58■□□□□ 0.24
TNFRSF1B-201ENST00000376259 KIAA1468Q9P260 1216 aa16.58■□□□□ 0.24
TNFRSF1B-201ENST00000376259 CDC42BPGQ6DT37 1551 aa16.58■□□□□ 0.24
TNFRSF1B-201ENST00000376259 TPM1P09493 284 aa16.58■□□□□ 0.24
TNFRSF1B-201ENST00000376259 DNAJC10Q8IXB1 793 aa16.58■□□□□ 0.24
TNFRSF1B-201ENST00000376259 KRT222Q8N1A0 295 aa16.58■□□□□ 0.24
TNFRSF1B-201ENST00000376259 DHX58Q96C10 678 aa16.58■□□□□ 0.24
TNFRSF1B-201ENST00000376259 PTPRUQ92729 1446 aa16.58■□□□□ 0.24
TNFRSF1B-201ENST00000376259 USP32Q8NFA0 1604 aa16.58■□□□□ 0.24
TNFRSF1B-201ENST00000376259 ADKP55263 362 aaKnown RBP16.57■□□□□ 0.24
TNFRSF1B-201ENST00000376259 ANKRD18BA2A2Z9 1011 aa16.57■□□□□ 0.24
TNFRSF1B-201ENST00000376259 CDKL5O76039 1030 aa16.57■□□□□ 0.24
TNFRSF1B-201ENST00000376259 SSRP1Q08945 709 aaKnown RBP16.57■□□□□ 0.24
TNFRSF1B-201ENST00000376259 GRAMD1CQ8IYS0 662 aa16.57■□□□□ 0.24
TNFRSF1B-201ENST00000376259 MAGEB6Q8N7X4 407 aa16.57■□□□□ 0.24
TNFRSF1B-201ENST00000376259 EEF2KMTQ96G04 330 aa16.57■□□□□ 0.24
TNFRSF1B-201ENST00000376259 PUF60Q9UHX1 559 aaKnown RBP16.57■□□□□ 0.24
TNFRSF1B-201ENST00000376259 CYP27B1O15528 508 aa16.57■□□□□ 0.24
TNFRSF1B-201ENST00000376259 SCARF1Q14162 830 aa16.57■□□□□ 0.24
TNFRSF1B-201ENST00000376259 LONRF3Q496Y0 759 aa16.57■□□□□ 0.24
TNFRSF1B-201ENST00000376259 KRT40Q6A162 431 aa16.57■□□□□ 0.24
TNFRSF1B-201ENST00000376259 CCDC12Q8WUD4 166 aaPredicted RBP16.57■□□□□ 0.24
TNFRSF1B-201ENST00000376259 ARMT1Q9H993 441 aa16.57■□□□□ 0.24
TNFRSF1B-201ENST00000376259 ADAMTS13Q76LX8 1427 aa16.56■□□□□ 0.24
TNFRSF1B-201ENST00000376259 NEMFO60524 1076 aa16.56■□□□□ 0.24
TNFRSF1B-201ENST00000376259 PDE4CQ08493 712 aa16.56■□□□□ 0.24
TNFRSF1B-201ENST00000376259 FUCA2Q9BTY2 467 aa16.56■□□□□ 0.24
TNFRSF1B-201ENST00000376259 ST7Q9NRC1 585 aa16.56■□□□□ 0.24
TNFRSF1B-201ENST00000376259 ELP1O95163 1332 aa16.56■□□□□ 0.24
TNFRSF1B-201ENST00000376259 HELLSQ9NRZ9 838 aa16.56■□□□□ 0.24
TNFRSF1B-201ENST00000376259 CLTCQ00610 1675 aaKnown RBP16.56■□□□□ 0.24
TNFRSF1B-201ENST00000376259 PLIN2Q99541 437 aa16.56■□□□□ 0.24
TNFRSF1B-201ENST00000376259 NRKQ7Z2Y5 1582 aa16.55■□□□□ 0.24
TNFRSF1B-201ENST00000376259 PREX1Q8TCU6 1659 aa16.55■□□□□ 0.24
TNFRSF1B-201ENST00000376259 POLR2DO15514 142 aaKnown RBP16.55■□□□□ 0.24
TNFRSF1B-201ENST00000376259 FAM193AP78312 1265 aa16.55■□□□□ 0.24
TNFRSF1B-201ENST00000376259 MCM6Q14566 821 aa16.55■□□□□ 0.24
TNFRSF1B-201ENST00000376259 NAA16Q6N069 864 aaPredicted RBP16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms