RNA–Protein interactions for RNA: ENST00000375759.7

SPEN-201, Transcript of spen family transcriptional repressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPEN, Length 12,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-201ENST00000375759 FAM184BQ9ULE4 1060 aa11.09□□□□□ -0.63
SPEN-201ENST00000375759 PLCB3Q01970 1234 aa11.09□□□□□ -0.63
SPEN-201ENST00000375759 TMEM87AQ8NBN3 555 aa11.09□□□□□ -0.63
SPEN-201ENST00000375759 CSRNP2Q9H175 543 aa11.09□□□□□ -0.63
SPEN-201ENST00000375759 CALM1P0DP23 149 aa11.08□□□□□ -0.64
SPEN-201ENST00000375759 CALM2P0DP24 149 aa11.08□□□□□ -0.64
SPEN-201ENST00000375759 CALM3P0DP25 149 aa11.08□□□□□ -0.64
SPEN-201ENST00000375759 SETSIPP0DME0 302 aa11.08□□□□□ -0.64
SPEN-201ENST00000375759 CCDC25Q86WR0 208 aa11.08□□□□□ -0.64
SPEN-201ENST00000375759 MBIPQ9NS73 344 aa11.08□□□□□ -0.64
SPEN-201ENST00000375759 GIGYF1O75420 1035 aaPredicted RBP11.08□□□□□ -0.64
SPEN-201ENST00000375759 TSNAXIP1Q2TAA8 658 aa11.08□□□□□ -0.64
SPEN-201ENST00000375759 KRT2P35908 639 aa11.08□□□□□ -0.64
SPEN-201ENST00000375759 CCDC122Q5T0U0 273 aa11.08□□□□□ -0.64
SPEN-201ENST00000375759 FEZ2Q9UHY8 353 aaPredicted RBP11.08□□□□□ -0.64
SPEN-201ENST00000375759 INPP5BP32019 993 aa11.08□□□□□ -0.64
SPEN-201ENST00000375759 PPP1R2P41236 205 aa11.08□□□□□ -0.64
SPEN-201ENST00000375759 KARSQ15046 597 aaKnown RBP11.08□□□□□ -0.64
SPEN-201ENST00000375759 RPUSD2Q8IZ73 545 aaKnown RBP11.08□□□□□ -0.64
SPEN-201ENST00000375759 BUB1BO60566 1050 aaPredicted RBP11.08□□□□□ -0.64
SPEN-201ENST00000375759 MPRIPQ6WCQ1 1025 aa11.08□□□□□ -0.64
SPEN-201ENST00000375759 UTP11Q9Y3A2 253 aaKnown RBP11.08□□□□□ -0.64
SPEN-201ENST00000375759 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.08□□□□□ -0.64
SPEN-201ENST00000375759 CC2D2AQ9P2K1 1620 aa11.08□□□□□ -0.64
SPEN-201ENST00000375759 TTC41PQ6P2S7 1318 aa11.08□□□□□ -0.64
SPEN-201ENST00000375759 NDUFAB1O14561 156 aa11.08□□□□□ -0.64
SPEN-201ENST00000375759 SEL1L2Q5TEA6 688 aa11.08□□□□□ -0.64
SPEN-201ENST00000375759 CROCCP2Q86T23 111 aa11.08□□□□□ -0.64
SPEN-201ENST00000375759 DHX58Q96C10 678 aa11.08□□□□□ -0.64
SPEN-201ENST00000375759 ELP1O95163 1332 aa11.08□□□□□ -0.64
SPEN-201ENST00000375759 HEATR3Q7Z4Q2 680 aa11.08□□□□□ -0.64
SPEN-201ENST00000375759 PRXQ9BXM0 1461 aa11.07□□□□□ -0.64
SPEN-201ENST00000375759 RGS22Q8NE09 1264 aa11.07□□□□□ -0.64
SPEN-201ENST00000375759 PI4KAP2A4QPH2 592 aa11.07□□□□□ -0.64
SPEN-201ENST00000375759 GOLGA6CA6NDK9 693 aa11.07□□□□□ -0.64
SPEN-201ENST00000375759 SMIM23A6NLE4 172 aa11.07□□□□□ -0.64
SPEN-201ENST00000375759 TMEM110-MUSTN1A8MSY1 372 aa11.07□□□□□ -0.64
SPEN-201ENST00000375759 ACTN4O43707 911 aaKnown RBP11.07□□□□□ -0.64
SPEN-201ENST00000375759 GOLGA6DP0CG33 693 aa11.07□□□□□ -0.64
SPEN-201ENST00000375759 PI4KAP1Q8N8J0 262 aa11.07□□□□□ -0.64
SPEN-201ENST00000375759 GOLGA6AQ9NYA3 693 aa11.07□□□□□ -0.64
SPEN-201ENST00000375759 VIMP08670 466 aaKnown RBP11.07□□□□□ -0.64
SPEN-201ENST00000375759 SARNPP82979 210 aaKnown RBP11.07□□□□□ -0.64
SPEN-201ENST00000375759 RPRD2Q5VT52 1461 aaKnown RBP11.07□□□□□ -0.64
SPEN-201ENST00000375759 SNX16P57768 344 aa11.07□□□□□ -0.64
SPEN-201ENST00000375759 ZC3H6P61129 1189 aaKnown RBP11.07□□□□□ -0.64
SPEN-201ENST00000375759 NEDD9Q14511 834 aa11.07□□□□□ -0.64
SPEN-201ENST00000375759 HS2ST1Q7LGA3 356 aa11.07□□□□□ -0.64
SPEN-201ENST00000375759 IFT20Q8IY31 132 aa11.07□□□□□ -0.64
SPEN-201ENST00000375759 C6orf50Q9HD87 102 aa11.07□□□□□ -0.64
SPEN-201ENST00000375759 GNAT2P19087 354 aa11.07□□□□□ -0.64
SPEN-201ENST00000375759 CEP85LQ5SZL2 805 aa11.07□□□□□ -0.64
SPEN-201ENST00000375759 PPP1R9BQ96SB3 815 aa11.07□□□□□ -0.64
SPEN-201ENST00000375759 NAPGQ99747 312 aaPredicted RBP11.07□□□□□ -0.64
SPEN-201ENST00000375759 ANKRD36BQ8N2N9 1353 aa11.07□□□□□ -0.64
SPEN-201ENST00000375759 TLDC2A0PJX2 215 aa11.06□□□□□ -0.64
SPEN-201ENST00000375759 TAOK1Q7L7X3 1001 aa11.06□□□□□ -0.64
SPEN-201ENST00000375759 RAB11FIP4Q86YS3 637 aa11.06□□□□□ -0.64
SPEN-201ENST00000375759 USH1CQ9Y6N9 552 aa11.06□□□□□ -0.64
SPEN-201ENST00000375759 CDK13Q14004 1512 aaKnown RBP11.06□□□□□ -0.64
SPEN-201ENST00000375759 GAS8O95995 478 aa11.06□□□□□ -0.64
SPEN-201ENST00000375759 VWA3BQ502W6 1294 aa11.06□□□□□ -0.64
SPEN-201ENST00000375759 IQUBQ8NA54 791 aa11.06□□□□□ -0.64
SPEN-201ENST00000375759 MAK16Q9BXY0 300 aaKnown RBP11.06□□□□□ -0.64
SPEN-201ENST00000375759 TTF2Q9UNY4 1162 aaKnown RBP11.06□□□□□ -0.64
SPEN-201ENST00000375759 MYL5Q02045 173 aa11.06□□□□□ -0.64
SPEN-201ENST00000375759 WDR78Q5VTH9 848 aa11.06□□□□□ -0.64
SPEN-201ENST00000375759 TERF1P54274 439 aa11.06□□□□□ -0.64
SPEN-201ENST00000375759 ARHGAP24Q8N264 748 aa11.06□□□□□ -0.64
SPEN-201ENST00000375759 NAPAP54920 295 aa11.06□□□□□ -0.64
SPEN-201ENST00000375759 CEP120Q8N960 986 aa11.06□□□□□ -0.64
SPEN-201ENST00000375759 INF2Q27J81 1249 aa11.06□□□□□ -0.64
SPEN-201ENST00000375759 ANKRD44Q8N8A2 993 aa11.06□□□□□ -0.64
SPEN-201ENST00000375759 IMPACTQ9P2X3 320 aa11.06□□□□□ -0.64
SPEN-201ENST00000375759 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.06□□□□□ -0.643e-11■□□□□ 8.4
SPEN-201ENST00000375759 RPL13P26373 211 aaKnown RBP11.06□□□□□ -0.64
SPEN-201ENST00000375759 CLUL1Q15846 466 aa11.06□□□□□ -0.64
SPEN-201ENST00000375759 CYP26C1Q6V0L0 522 aa11.05□□□□□ -0.64
SPEN-201ENST00000375759 DTHD1Q6ZMT9 781 aa11.05□□□□□ -0.64
SPEN-201ENST00000375759 SNRKQ9NRH2 765 aa11.05□□□□□ -0.64
SPEN-201ENST00000375759 CASQ2O14958 399 aaPredicted RBP11.05□□□□□ -0.64
SPEN-201ENST00000375759 ARID4AP29374 1257 aaPredicted RBP11.05□□□□□ -0.64
SPEN-201ENST00000375759 RUFY4Q6ZNE9 571 aa11.05□□□□□ -0.64
SPEN-201ENST00000375759 VCXQ9H320 206 aa11.05□□□□□ -0.64
SPEN-201ENST00000375759 FAM13AO94988 1023 aa11.05□□□□□ -0.64
SPEN-201ENST00000375759 HPDP32754 393 aaPredicted RBP11.05□□□□□ -0.64
SPEN-201ENST00000375759 PHLDB2Q86SQ0 1253 aa11.05□□□□□ -0.64
SPEN-201ENST00000375759 LRRC2Q9BYS8 371 aa11.05□□□□□ -0.64
SPEN-201ENST00000375759 C8orf34Q49A92 452 aa11.05□□□□□ -0.64
SPEN-201ENST00000375759 KRT79Q5XKE5 535 aa11.05□□□□□ -0.64
SPEN-201ENST00000375759 C8orf74Q6P047 294 aa11.05□□□□□ -0.64
SPEN-201ENST00000375759 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.05□□□□□ -0.64
SPEN-201ENST00000375759 CLNS1AP54105 237 aaKnown RBP11.05□□□□□ -0.64
SPEN-201ENST00000375759 CCDC152Q4G0S7 254 aa11.05□□□□□ -0.64
SPEN-201ENST00000375759 FAM169AQ9Y6X4 670 aa11.05□□□□□ -0.64
SPEN-201ENST00000375759 RUFY3Q7L099 469 aa11.05□□□□□ -0.64
SPEN-201ENST00000375759 GNA11P29992 359 aa11.05□□□□□ -0.64
SPEN-201ENST00000375759 CCDC62Q6P9F0 684 aa11.05□□□□□ -0.64
SPEN-201ENST00000375759 VPS52Q8N1B4 723 aa11.05□□□□□ -0.64
SPEN-201ENST00000375759 PPFIA3O75145 1194 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 115.4 ms