RNA–Protein interactions for RNA: ENST00000372484.7

CTSA-204, Transcript of cathepsin A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSA, Length 2,149 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-204ENST00000372484 GTF2E1P29083 439 aaPredicted RBP21.16■□□□□ 0.98
CTSA-204ENST00000372484 RASGRF1Q13972 1273 aa21.16■□□□□ 0.98
CTSA-204ENST00000372484 TBC1D9BQ66K14 1250 aa21.16■□□□□ 0.98
CTSA-204ENST00000372484 CCNL1Q9UK58 526 aaPredicted RBP21.16■□□□□ 0.98
CTSA-204ENST00000372484 ZNF532Q9HCE3 1301 aa21.16■□□□□ 0.98
CTSA-204ENST00000372484 PDE6AP16499 860 aa21.16■□□□□ 0.98
CTSA-204ENST00000372484 AGXT2Q9BYV1 514 aa21.16■□□□□ 0.98
CTSA-204ENST00000372484 GNPATO15228 680 aa21.15■□□□□ 0.98
CTSA-204ENST00000372484 APOBRQ0VD83 1088 aa21.15■□□□□ 0.98
CTSA-204ENST00000372484 CDC37L1Q7L3B6 337 aa21.15■□□□□ 0.98
CTSA-204ENST00000372484 CHST3Q7LGC8 479 aa21.15■□□□□ 0.98
CTSA-204ENST00000372484 GJD4Q96KN9 370 aaPredicted RBP21.15■□□□□ 0.98
CTSA-204ENST00000372484 NARFQ9UHQ1 456 aa21.15■□□□□ 0.98
CTSA-204ENST00000372484 WWC3Q9ULE0 1092 aa21.15■□□□□ 0.98
CTSA-204ENST00000372484 CASZ1Q86V15 1759 aa21.15■□□□□ 0.98
CTSA-204ENST00000372484 JAK2O60674 1132 aa21.14■□□□□ 0.98
CTSA-204ENST00000372484 PFKFB2O60825 505 aa21.14■□□□□ 0.98
CTSA-204ENST00000372484 DNM1Q05193 864 aaKnown RBP21.14■□□□□ 0.98
CTSA-204ENST00000372484 SCRN1Q12765 414 aa21.14■□□□□ 0.98
CTSA-204ENST00000372484 ANKRD18AQ8IVF6 992 aa21.14■□□□□ 0.98
CTSA-204ENST00000372484 BCL2L12Q9HB09 334 aa21.14■□□□□ 0.98
CTSA-204ENST00000372484 ZNF213O14771 459 aa21.14■□□□□ 0.97
CTSA-204ENST00000372484 FIBPO43427 364 aa21.14■□□□□ 0.97
CTSA-204ENST00000372484 BCAMP50895 628 aa21.14■□□□□ 0.97
CTSA-204ENST00000372484 SF3B3Q15393 1217 aaKnown RBP21.14■□□□□ 0.97
CTSA-204ENST00000372484 C3orf67Q6ZVT6 689 aa21.14■□□□□ 0.97
CTSA-204ENST00000372484 COL4A1P02462 1669 aa21.14■□□□□ 0.97
CTSA-204ENST00000372484 TAF1P21675 1872 aa21.13■□□□□ 0.97
CTSA-204ENST00000372484 ZPR1O75312 459 aa21.13■□□□□ 0.97
CTSA-204ENST00000372484 MAP3K12Q12852 859 aa21.13■□□□□ 0.97
CTSA-204ENST00000372484 SYAP1Q96A49 352 aaPredicted RBP21.13■□□□□ 0.97
CTSA-204ENST00000372484 SRP68Q9UHB9 627 aaKnown RBP21.13■□□□□ 0.97
CTSA-204ENST00000372484 DOCK2Q92608 1830 aa21.13■□□□□ 0.97
CTSA-204ENST00000372484 TCRBV5S4A2TA0A5A2 114 aa21.13■□□□□ 0.97
CTSA-204ENST00000372484 CSPP1Q1MSJ5 1256 aa21.13■□□□□ 0.97
CTSA-204ENST00000372484 SETDB2Q96T68 719 aa21.13■□□□□ 0.97
CTSA-204ENST00000372484 RTCBQ9Y3I0 505 aaKnown RBP21.13■□□□□ 0.97
CTSA-204ENST00000372484 APPP05067 770 aa21.12■□□□□ 0.97
CTSA-204ENST00000372484 FERMT3Q86UX7 667 aa21.12■□□□□ 0.97
CTSA-204ENST00000372484 LLPHQ9BRT6 129 aaKnown RBP21.12■□□□□ 0.97
CTSA-204ENST00000372484 NYXQ9GZU5 481 aa21.12■□□□□ 0.97
CTSA-204ENST00000372484 NAP1L2Q9ULW6 460 aaPredicted RBP21.12■□□□□ 0.97
CTSA-204ENST00000372484 SYCE3A1L190 88 aa21.11■□□□□ 0.97
CTSA-204ENST00000372484 AIDAQ96BJ3 306 aa21.11■□□□□ 0.97
CTSA-204ENST00000372484 UBE2HP62256 183 aa21.11■□□□□ 0.97
CTSA-204ENST00000372484 SLC10A5Q5PT55 438 aa21.11■□□□□ 0.97
CTSA-204ENST00000372484 FBXL16Q8N461 479 aa21.11■□□□□ 0.97
CTSA-204ENST00000372484 MAGEB6Q8N7X4 407 aa21.11■□□□□ 0.97
CTSA-204ENST00000372484 NCOA7Q8NI08 942 aa21.11■□□□□ 0.97
CTSA-204ENST00000372484 BSDC1Q9NW68 430 aaPredicted RBP21.11■□□□□ 0.97
CTSA-204ENST00000372484 AFF2P51816 1311 aa21.1■□□□□ 0.97
CTSA-204ENST00000372484 MCM5P33992 734 aa21.1■□□□□ 0.97
CTSA-204ENST00000372484 RALYLQ86SE5 291 aaKnown RBP21.1■□□□□ 0.97
CTSA-204ENST00000372484 NBPF5PQ86XG9 351 aaPredicted RBP21.1■□□□□ 0.97
CTSA-204ENST00000372484 DDX11Q96FC9 970 aa21.1■□□□□ 0.97
CTSA-204ENST00000372484 ZNF274Q96GC6 653 aaPredicted RBP21.1■□□□□ 0.97
CTSA-204ENST00000372484 SBF2Q86WG5 1849 aa21.1■□□□□ 0.97
CTSA-204ENST00000372484 TAF1LQ8IZX4 1826 aa21.1■□□□□ 0.97
CTSA-204ENST00000372484 LY75O60449 1722 aa21.1■□□□□ 0.97
CTSA-204ENST00000372484 CCT2P78371 535 aaKnown RBP21.1■□□□□ 0.97
CTSA-204ENST00000372484 FAM184AQ8NB25 1140 aa21.1■□□□□ 0.97
CTSA-204ENST00000372484 SMARCC2Q8TAQ2 1214 aa21.1■□□□□ 0.97
CTSA-204ENST00000372484 PDIA3P30101 505 aaKnown RBP21.09■□□□□ 0.97
CTSA-204ENST00000372484 NASPP49321 788 aaPredicted RBP21.09■□□□□ 0.97
CTSA-204ENST00000372484 LRSAM1Q6UWE0 723 aa21.09■□□□□ 0.97
CTSA-204ENST00000372484 MB21D2Q8IYB1 491 aaPredicted RBP21.09■□□□□ 0.97
CTSA-204ENST00000372484 STRBPQ96SI9 672 aaKnown RBP21.09■□□□□ 0.97
CTSA-204ENST00000372484 A0A1B0GUL6 1792 aa21.09■□□□□ 0.97
CTSA-204ENST00000372484 PRC1O43663 620 aa21.08■□□□□ 0.97
CTSA-204ENST00000372484 KRT85P78386 507 aa21.08■□□□□ 0.97
CTSA-204ENST00000372484 TPRNQ4KMQ1 711 aa21.08■□□□□ 0.97
CTSA-204ENST00000372484 NSUN7Q8NE18 718 aaKnown RBP21.08■□□□□ 0.97
CTSA-204ENST00000372484 CERKQ8TCT0 537 aa21.08■□□□□ 0.97
CTSA-204ENST00000372484 HSPA1LP34931 641 aa21.08■□□□□ 0.96
CTSA-204ENST00000372484 ARHGEF1Q92888 912 aaKnown RBP21.08■□□□□ 0.96
CTSA-204ENST00000372484 NLRP3Q96P20 1036 aa21.08■□□□□ 0.96
CTSA-204ENST00000372484 COL24A1Q17RW2 1714 aa21.07■□□□□ 0.96
CTSA-204ENST00000372484 H3BQV1 296 aa21.07■□□□□ 0.96
CTSA-204ENST00000372484 HMGN5P82970 282 aaKnown RBP21.07■□□□□ 0.96
CTSA-204ENST00000372484 TRDNQ13061 729 aa21.07■□□□□ 0.96
CTSA-204ENST00000372484 IFFO2Q5TF58 517 aa21.07■□□□□ 0.96
CTSA-204ENST00000372484 AMIGO3Q86WK7 504 aa21.07■□□□□ 0.96
CTSA-204ENST00000372484 CELF1Q92879 486 aaKnown RBP21.07■□□□□ 0.96
CTSA-204ENST00000372484 CHMP4CQ96CF2 233 aa21.07■□□□□ 0.96
CTSA-204ENST00000372484 NCOA5Q9HCD5 579 aaKnown RBP21.07■□□□□ 0.96
CTSA-204ENST00000372484 MINPP1Q9UNW1 487 aa21.07■□□□□ 0.96
CTSA-204ENST00000372484 PTPDC1A2A3K4 754 aa21.07■□□□□ 0.96
CTSA-204ENST00000372484 CTDNEP1O95476 244 aa21.07■□□□□ 0.96
CTSA-204ENST00000372484 EVCP57679 992 aa21.07■□□□□ 0.96
CTSA-204ENST00000372484 UBE4AQ14139 1066 aa21.07■□□□□ 0.96
CTSA-204ENST00000372484 FAM173BQ6P4H8 233 aa21.07■□□□□ 0.96
CTSA-204ENST00000372484 TPTE2Q6XPS3 522 aa21.07■□□□□ 0.96
CTSA-204ENST00000372484 NBPF3Q9H094 633 aa21.07■□□□□ 0.96
CTSA-204ENST00000372484 GPHNQ9NQX3 736 aaPredicted RBP21.07■□□□□ 0.96
CTSA-204ENST00000372484 LRP2BPQ9P2M1 347 aa21.07■□□□□ 0.96
CTSA-204ENST00000372484 PHF14O94880 888 aa21.06■□□□□ 0.96
CTSA-204ENST00000372484 MBD4O95243 580 aa21.06■□□□□ 0.96
CTSA-204ENST00000372484 IQSEC3Q9UPP2 1182 aaPredicted RBP21.06■□□□□ 0.96
CTSA-204ENST00000372484 KIF3AQ9Y496 699 aa21.06■□□□□ 0.96
CTSA-204ENST00000372484 ONECUT3O60422 494 aaPredicted RBP21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms