RNA–Protein interactions for RNA: ENST00000372195.5

RAPGEF1-203, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-203ENST00000372195 PPARDQ03181 441 aa27.13■■□□□ 1.93
RAPGEF1-203ENST00000372195 SMARCC2Q8TAQ2 1214 aa27.13■■□□□ 1.93
RAPGEF1-203ENST00000372195 HMGXB3Q12766 1538 aa27.13■■□□□ 1.93
RAPGEF1-203ENST00000372195 ACTN2P35609 894 aa27.13■■□□□ 1.93
RAPGEF1-203ENST00000372195 SMC5Q8IY18 1101 aa27.13■■□□□ 1.93
RAPGEF1-203ENST00000372195 PPP1R9BQ96SB3 815 aa27.13■■□□□ 1.93
RAPGEF1-203ENST00000372195 CTNND2Q9UQB3 1225 aa27.13■■□□□ 1.93
RAPGEF1-203ENST00000372195 KIF4AO95239 1232 aa27.12■■□□□ 1.93
RAPGEF1-203ENST00000372195 BBXQ8WY36 941 aaPredicted RBP27.12■■□□□ 1.93
RAPGEF1-203ENST00000372195 ZNF174Q15697 407 aa27.12■■□□□ 1.93
RAPGEF1-203ENST00000372195 ALDH1L1O75891 902 aa27.12■■□□□ 1.93
RAPGEF1-203ENST00000372195 MCM9Q9NXL9 1143 aa27.12■■□□□ 1.93
RAPGEF1-203ENST00000372195 PTPRKQ15262 1439 aa27.12■■□□□ 1.93
RAPGEF1-203ENST00000372195 HSPA4P34932 840 aa27.12■■□□□ 1.93
RAPGEF1-203ENST00000372195 GTF3C6Q969F1 213 aa27.12■■□□□ 1.93
RAPGEF1-203ENST00000372195 RBSNQ9H1K0 784 aa27.12■■□□□ 1.93
RAPGEF1-203ENST00000372195 ZBTB40Q9NUA8 1239 aa27.12■■□□□ 1.93
RAPGEF1-203ENST00000372195 NCKAP5LQ9HCH0 1330 aa27.11■■□□□ 1.93
RAPGEF1-203ENST00000372195 ZEB2O60315 1214 aa27.11■■□□□ 1.93
RAPGEF1-203ENST00000372195 C17orf53Q8N3J3 647 aaPredicted RBP27.11■■□□□ 1.93
RAPGEF1-203ENST00000372195 FBF1Q8TES7 1133 aa27.11■■□□□ 1.93
RAPGEF1-203ENST00000372195 GPIHBP1Q8IV16 184 aa27.11■■□□□ 1.93
RAPGEF1-203ENST00000372195 G2E3Q7L622 706 aa27.11■■□□□ 1.93
RAPGEF1-203ENST00000372195 CCDC172P0C7W6 258 aa27.11■■□□□ 1.93
RAPGEF1-203ENST00000372195 RIMBP2O15034 1052 aa27.1■■□□□ 1.93
RAPGEF1-203ENST00000372195 KIF5AQ12840 1032 aa27.1■■□□□ 1.93
RAPGEF1-203ENST00000372195 TSNARE1Q96NA8 513 aa27.1■■□□□ 1.93
RAPGEF1-203ENST00000372195 SIRT1Q96EB6 747 aa27.1■■□□□ 1.93
RAPGEF1-203ENST00000372195 CCDC42Q96M95 316 aa27.1■■□□□ 1.93
RAPGEF1-203ENST00000372195 GRIN2AQ12879 1464 aa27.1■■□□□ 1.93
RAPGEF1-203ENST00000372195 CCDC94Q9BW85 323 aaPredicted RBP27.1■■□□□ 1.93
RAPGEF1-203ENST00000372195 SAP30BPQ9UHR5 308 aaKnown RBP27.1■■□□□ 1.93
RAPGEF1-203ENST00000372195 RASAL2Q9UJF2 1139 aa27.1■■□□□ 1.93
RAPGEF1-203ENST00000372195 BMP15O95972 392 aa27.09■■□□□ 1.93
RAPGEF1-203ENST00000372195 APBB1IPQ7Z5R6 666 aaPredicted RBP27.09■■□□□ 1.93
RAPGEF1-203ENST00000372195 CCDC25Q86WR0 208 aa27.09■■□□□ 1.93
RAPGEF1-203ENST00000372195 VWA3AA6NCI4 1184 aa27.09■■□□□ 1.93
RAPGEF1-203ENST00000372195 DZIP3Q86Y13 1208 aaKnown RBP27.09■■□□□ 1.93
RAPGEF1-203ENST00000372195 RRP36Q96EU6 259 aaKnown RBP27.09■■□□□ 1.93
RAPGEF1-203ENST00000372195 KDM5BQ9UGL1 1544 aa27.09■■□□□ 1.93
RAPGEF1-203ENST00000372195 TTC41PQ6P2S7 1318 aa27.09■■□□□ 1.93
RAPGEF1-203ENST00000372195 MSL1Q68DK7 614 aa27.08■■□□□ 1.93
RAPGEF1-203ENST00000372195 NEK11Q8NG66 645 aa27.08■■□□□ 1.93
RAPGEF1-203ENST00000372195 C6orf50Q9HD87 102 aa27.08■■□□□ 1.93
RAPGEF1-203ENST00000372195 PARD3Q8TEW0 1356 aa27.08■■□□□ 1.93
RAPGEF1-203ENST00000372195 GRIPAP1Q4V328 841 aa27.08■■□□□ 1.93
RAPGEF1-203ENST00000372195 CCDC63Q8NA47 563 aa27.08■■□□□ 1.93
RAPGEF1-203ENST00000372195 KLHDC4Q8TBB5 520 aa27.07■■□□□ 1.92
RAPGEF1-203ENST00000372195 PKD2L1Q9P0L9 805 aa27.07■■□□□ 1.92
RAPGEF1-203ENST00000372195 KRT83P78385 493 aa27.07■■□□□ 1.92
RAPGEF1-203ENST00000372195 FAM173BQ6P4H8 233 aa27.07■■□□□ 1.92
RAPGEF1-203ENST00000372195 KRT86O43790 486 aa27.07■■□□□ 1.92
RAPGEF1-203ENST00000372195 SPAG1Q07617 926 aa27.07■■□□□ 1.92
RAPGEF1-203ENST00000372195 DHX32Q7L7V1 743 aaKnown RBP27.07■■□□□ 1.92
RAPGEF1-203ENST00000372195 IRS4O14654 1257 aaPredicted RBP27.07■■□□□ 1.92
RAPGEF1-203ENST00000372195 DCAF17Q5H9S7 520 aaPredicted RBP27.07■■□□□ 1.92
RAPGEF1-203ENST00000372195 FAM13AO94988 1023 aa27.06■■□□□ 1.92
RAPGEF1-203ENST00000372195 CA8P35219 290 aa27.06■■□□□ 1.92
RAPGEF1-203ENST00000372195 SP4Q02446 784 aa27.06■■□□□ 1.92
RAPGEF1-203ENST00000372195 C6orf163Q5TEZ5 329 aa27.06■■□□□ 1.92
RAPGEF1-203ENST00000372195 TLDC2A0PJX2 215 aa27.06■■□□□ 1.92
RAPGEF1-203ENST00000372195 OPA1O60313 960 aa27.06■■□□□ 1.92
RAPGEF1-203ENST00000372195 ARL1P40616 181 aaPredicted RBP27.06■■□□□ 1.92
RAPGEF1-203ENST00000372195 IQCGQ9H095 443 aaKnown RBP27.06■■□□□ 1.92
RAPGEF1-203ENST00000372195 RAPGEF1Q13905 1077 aa27.06■■□□□ 1.92
RAPGEF1-203ENST00000372195 MAPK8IP1Q9UQF2 711 aa27.06■■□□□ 1.92
RAPGEF1-203ENST00000372195 RTL9Q8NET4 1388 aa27.06■■□□□ 1.92
RAPGEF1-203ENST00000372195 FERP16591 822 aa27.06■■□□□ 1.92
RAPGEF1-203ENST00000372195 FAM170AA1A519 330 aa27.06■■□□□ 1.92
RAPGEF1-203ENST00000372195 RNASE9P60153 205 aaKnown RBP27.06■■□□□ 1.92
RAPGEF1-203ENST00000372195 UIMC1Q96RL1 719 aa27.05■■□□□ 1.92
RAPGEF1-203ENST00000372195 CARD14Q9BXL6 1004 aa27.05■■□□□ 1.92
RAPGEF1-203ENST00000372195 NCOA5Q9HCD5 579 aaKnown RBP27.05■■□□□ 1.92
RAPGEF1-203ENST00000372195 IVLP07476 585 aa27.05■■□□□ 1.92
RAPGEF1-203ENST00000372195 CCDC6Q16204 474 aa27.05■■□□□ 1.92
RAPGEF1-203ENST00000372195 PLCB3Q01970 1234 aa27.05■■□□□ 1.92
RAPGEF1-203ENST00000372195 NDUFB9Q9Y6M9 179 aa27.05■■□□□ 1.92
RAPGEF1-203ENST00000372195 CEP57Q86XR8 500 aa27.05■■□□□ 1.92
RAPGEF1-203ENST00000372195 NLRP3Q96P20 1036 aa27.05■■□□□ 1.92
RAPGEF1-203ENST00000372195 TMEM87AQ8NBN3 555 aa27.05■■□□□ 1.92
RAPGEF1-203ENST00000372195 VEZTQ9HBM0 779 aa27.05■■□□□ 1.92
RAPGEF1-203ENST00000372195 U2AF2P26368 475 aaKnown RBP eCLIP27.04■■□□□ 1.921e-7■■■■■ 32.6
RAPGEF1-203ENST00000372195 KRT79Q5XKE5 535 aa27.04■■□□□ 1.92
RAPGEF1-203ENST00000372195 OTUD6BQ8N6M0 293 aa27.04■■□□□ 1.92
RAPGEF1-203ENST00000372195 RBM26Q5T8P6 1007 aaKnown RBP27.04■■□□□ 1.92
RAPGEF1-203ENST00000372195 NSRP1Q9H0G5 558 aaKnown RBP27.04■■□□□ 1.92
RAPGEF1-203ENST00000372195 B4E1Z4 1266 aa27.03■■□□□ 1.92
RAPGEF1-203ENST00000372195 C10orf67Q8IYJ2 551 aa27.03■■□□□ 1.92
RAPGEF1-203ENST00000372195 PRAG1Q86YV5 1406 aa27.03■■□□□ 1.92
RAPGEF1-203ENST00000372195 DTHD1Q6ZMT9 781 aa27.03■■□□□ 1.92
RAPGEF1-203ENST00000372195 ZNF804AQ7Z570 1209 aa27.03■■□□□ 1.92
RAPGEF1-203ENST00000372195 RRAGDQ9NQL2 400 aaPredicted RBP27.03■■□□□ 1.92
RAPGEF1-203ENST00000372195 LONRF3Q496Y0 759 aa27.03■■□□□ 1.92
RAPGEF1-203ENST00000372195 DENND4BO75064 1496 aaPredicted RBP27.03■■□□□ 1.92
RAPGEF1-203ENST00000372195 TCHPQ9BT92 498 aa27.03■■□□□ 1.92
RAPGEF1-203ENST00000372195 VPS16Q9H269 839 aa27.03■■□□□ 1.92
RAPGEF1-203ENST00000372195 KCNK9Q9NPC2 374 aa27.03■■□□□ 1.92
RAPGEF1-203ENST00000372195 OTUD7BQ6GQQ9 843 aa27.02■■□□□ 1.92
RAPGEF1-203ENST00000372195 MBD4O95243 580 aa27.02■■□□□ 1.92
RAPGEF1-203ENST00000372195 BAG1Q99933 345 aaPredicted RBP27.02■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms