RNA–Protein interactions for RNA: ENST00000372146.4

GTF3C4-201, Transcript of general transcription factor IIIC subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C4, Length 9,043 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4-201ENST00000372146 RBM42Q9BTD8 480 aaKnown RBP17.19■□□□□ 0.34
GTF3C4-201ENST00000372146 PLEKHH2Q8IVE3 1493 aa17.19■□□□□ 0.34
GTF3C4-201ENST00000372146 DUSP27Q5VZP5 1158 aa17.19■□□□□ 0.34
GTF3C4-201ENST00000372146 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.19■□□□□ 0.34
GTF3C4-201ENST00000372146 ATAD2Q6PL18 1390 aa17.19■□□□□ 0.34
GTF3C4-201ENST00000372146 MCM7P33993 719 aa17.19■□□□□ 0.34
GTF3C4-201ENST00000372146 PHLDB3Q6NSJ2 640 aa17.19■□□□□ 0.34
GTF3C4-201ENST00000372146 KIF1BPQ96EK5 621 aa17.19■□□□□ 0.34
GTF3C4-201ENST00000372146 CUX1P39880 1505 aa17.19■□□□□ 0.34
GTF3C4-201ENST00000372146 LRRC27Q9C0I9 530 aa17.19■□□□□ 0.34
GTF3C4-201ENST00000372146 VEZTQ9HBM0 779 aa17.19■□□□□ 0.34
GTF3C4-201ENST00000372146 ANLNQ9NQW6 1124 aa17.19■□□□□ 0.34
GTF3C4-201ENST00000372146 IFIT3O14879 490 aaKnown RBP17.18■□□□□ 0.34
GTF3C4-201ENST00000372146 MAP3K21Q5TCX8 1036 aa17.18■□□□□ 0.34
GTF3C4-201ENST00000372146 TBC1D9Q6ZT07 1266 aa17.18■□□□□ 0.34
GTF3C4-201ENST00000372146 DPH6Q7L8W6 267 aa17.18■□□□□ 0.34
GTF3C4-201ENST00000372146 IFNKQ9P0W0 207 aa17.18■□□□□ 0.34
GTF3C4-201ENST00000372146 PPP1R21Q6ZMI0 780 aa17.18■□□□□ 0.34
GTF3C4-201ENST00000372146 WDR70Q9NW82 654 aa17.18■□□□□ 0.34
GTF3C4-201ENST00000372146 ARHGAP42A6NI28 874 aa17.18■□□□□ 0.34
GTF3C4-201ENST00000372146 PPFIA3O75145 1194 aa17.18■□□□□ 0.34
GTF3C4-201ENST00000372146 KCNG4Q8TDN1 519 aa17.18■□□□□ 0.34
GTF3C4-201ENST00000372146 DENND2CQ68D51 928 aa17.18■□□□□ 0.34
GTF3C4-201ENST00000372146 LARSQ9P2J5 1176 aaKnown RBP17.18■□□□□ 0.34
GTF3C4-201ENST00000372146 ACTN4O43707 911 aaKnown RBP17.18■□□□□ 0.34
GTF3C4-201ENST00000372146 WDHD1O75717 1129 aaPredicted RBP17.18■□□□□ 0.34
GTF3C4-201ENST00000372146 NUDCD3Q8IVD9 361 aa17.18■□□□□ 0.34
GTF3C4-201ENST00000372146 AGTPBP1Q9UPW5 1226 aa17.18■□□□□ 0.34
GTF3C4-201ENST00000372146 RNASE9P60153 205 aaKnown RBP17.17■□□□□ 0.34
GTF3C4-201ENST00000372146 MICU3Q86XE3 530 aa17.17■□□□□ 0.34
GTF3C4-201ENST00000372146 NAPGQ99747 312 aaPredicted RBP17.17■□□□□ 0.34
GTF3C4-201ENST00000372146 N4BP2L2Q92802 583 aaPredicted RBP17.17■□□□□ 0.34
GTF3C4-201ENST00000372146 CUL4BQ13620 913 aa17.17■□□□□ 0.34
GTF3C4-201ENST00000372146 BCAP29Q9UHQ4 241 aa17.17■□□□□ 0.34
GTF3C4-201ENST00000372146 METAP2P50579 478 aaKnown RBP eCLIP17.17■□□□□ 0.34
GTF3C4-201ENST00000372146 PPFIA1Q13136 1202 aa17.17■□□□□ 0.34
GTF3C4-201ENST00000372146 CEP126Q9P2H0 1117 aa17.17■□□□□ 0.34
GTF3C4-201ENST00000372146 LIG3P49916 1009 aa17.17■□□□□ 0.34
GTF3C4-201ENST00000372146 SERPINB6P35237 376 aa17.17■□□□□ 0.34
GTF3C4-201ENST00000372146 SPG7Q9UQ90 795 aa17.17■□□□□ 0.34
GTF3C4-201ENST00000372146 CEP104O60308 925 aa17.16■□□□□ 0.34
GTF3C4-201ENST00000372146 NCAPGQ9BPX3 1015 aa17.16■□□□□ 0.34
GTF3C4-201ENST00000372146 HAUS7Q99871 368 aa17.16■□□□□ 0.34
GTF3C4-201ENST00000372146 RUFY4Q6ZNE9 571 aa17.16■□□□□ 0.34
GTF3C4-201ENST00000372146 USP37Q86T82 979 aa17.16■□□□□ 0.34
GTF3C4-201ENST00000372146 IWS1Q96ST2 819 aa17.16■□□□□ 0.34
GTF3C4-201ENST00000372146 ANKFY1Q9P2R3 1169 aa17.16■□□□□ 0.34
GTF3C4-201ENST00000372146 DHX29Q7Z478 1369 aaKnown RBP17.16■□□□□ 0.34
GTF3C4-201ENST00000372146 HSP90AA5PQ58FG0 334 aa17.16■□□□□ 0.34
GTF3C4-201ENST00000372146 SLC26A6Q9BXS9 759 aa17.16■□□□□ 0.34
GTF3C4-201ENST00000372146 FGD5Q6ZNL6 1462 aa17.16■□□□□ 0.34
GTF3C4-201ENST00000372146 PSMA7O14818 248 aa17.16■□□□□ 0.34
GTF3C4-201ENST00000372146 HHATQ5VTY9 493 aa17.16■□□□□ 0.34
GTF3C4-201ENST00000372146 HMGB1P1B2RPK0 211 aaPredicted RBP17.15■□□□□ 0.34
GTF3C4-201ENST00000372146 CCDC92Q53HC0 331 aaPredicted RBP17.15■□□□□ 0.34
GTF3C4-201ENST00000372146 EIF2AQ9BY44 585 aaKnown RBP17.15■□□□□ 0.34
GTF3C4-201ENST00000372146 GIPC1O14908 333 aa17.15■□□□□ 0.34
GTF3C4-201ENST00000372146 SKOR1P84550 965 aa17.15■□□□□ 0.34
GTF3C4-201ENST00000372146 KIF21BO75037 1637 aa17.15■□□□□ 0.34
GTF3C4-201ENST00000372146 CCDC85AQ96PX6 553 aaPredicted RBP17.15■□□□□ 0.34
GTF3C4-201ENST00000372146 SCHIP1Q9P0W5 487 aaPredicted RBP17.15■□□□□ 0.34
GTF3C4-201ENST00000372146 RAP1GDS1P52306 607 aa17.15■□□□□ 0.34
GTF3C4-201ENST00000372146 CRACR2BQ8N4Y2 399 aaPredicted RBP17.15■□□□□ 0.34
GTF3C4-201ENST00000372146 PCYT1AP49585 367 aa17.15■□□□□ 0.34
GTF3C4-201ENST00000372146 TMEM67Q5HYA8 995 aa17.15■□□□□ 0.34
GTF3C4-201ENST00000372146 CNGA4Q8IV77 575 aa17.15■□□□□ 0.34
GTF3C4-201ENST00000372146 MAN1A2O60476 641 aa17.14■□□□□ 0.33
GTF3C4-201ENST00000372146 MARCKSP29966 332 aaPredicted RBP17.14■□□□□ 0.33
GTF3C4-201ENST00000372146 SPAG1Q07617 926 aa17.14■□□□□ 0.33
GTF3C4-201ENST00000372146 PLEKHO1Q53GL0 409 aaPredicted RBP17.14■□□□□ 0.33
GTF3C4-201ENST00000372146 WDR97A6NE52 1622 aa17.14■□□□□ 0.33
GTF3C4-201ENST00000372146 TBC1D32Q96NH3 1257 aa17.14■□□□□ 0.33
GTF3C4-201ENST00000372146 AKR1B15C9JRZ8 316 aaPredicted RBP17.14■□□□□ 0.33
GTF3C4-201ENST00000372146 KRT10P13645 584 aa17.14■□□□□ 0.33
GTF3C4-201ENST00000372146 CNGA1P29973 690 aa17.14■□□□□ 0.33
GTF3C4-201ENST00000372146 METTL24Q5JXM2 366 aa17.14■□□□□ 0.33
GTF3C4-201ENST00000372146 DACT1Q9NYF0 836 aa17.14■□□□□ 0.33
GTF3C4-201ENST00000372146 ANKRD20A3Q5VUR7 823 aa17.13■□□□□ 0.33
GTF3C4-201ENST00000372146 MYCNP04198 464 aaPredicted RBP17.13■□□□□ 0.33
GTF3C4-201ENST00000372146 IARSP41252 1262 aaKnown RBP17.13■□□□□ 0.33
GTF3C4-201ENST00000372146 PPP1R1BQ9UD71 204 aaPredicted RBP17.13■□□□□ 0.33
GTF3C4-201ENST00000372146 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.13■□□□□ 0.33
GTF3C4-201ENST00000372146 CCDC89Q8N998 374 aa17.13■□□□□ 0.33
GTF3C4-201ENST00000372146 BTBD11A6QL63 1104 aa17.13■□□□□ 0.33
GTF3C4-201ENST00000372146 DMTNQ08495 405 aa17.13■□□□□ 0.33
GTF3C4-201ENST00000372146 HAUS8Q9BT25 410 aa17.13■□□□□ 0.33
GTF3C4-201ENST00000372146 PPME1Q9Y570 386 aa17.13■□□□□ 0.33
GTF3C4-201ENST00000372146 SETD1BQ9UPS6 1966 aaKnown RBP17.13■□□□□ 0.33
GTF3C4-201ENST00000372146 CCT6AP40227 531 aaKnown RBP17.13■□□□□ 0.33
GTF3C4-201ENST00000372146 WDR46O15213 610 aaKnown RBP17.13■□□□□ 0.33
GTF3C4-201ENST00000372146 MRPS27Q92552 414 aaKnown RBP17.13■□□□□ 0.33
GTF3C4-201ENST00000372146 JPH2Q9BR39 696 aaPredicted RBP17.13■□□□□ 0.33
GTF3C4-201ENST00000372146 SCINQ9Y6U3 715 aa17.13■□□□□ 0.33
GTF3C4-201ENST00000372146 CSRNP2Q9H175 543 aa17.12■□□□□ 0.33
GTF3C4-201ENST00000372146 IGHMBP2P38935 993 aaKnown RBP17.12■□□□□ 0.33
GTF3C4-201ENST00000372146 GAPVD1Q14C86 1478 aa17.12■□□□□ 0.33
GTF3C4-201ENST00000372146 ZRANB2O95218 330 aaKnown RBP eCLIP17.12■□□□□ 0.33
GTF3C4-201ENST00000372146 ZNF444Q8N0Y2 327 aaPredicted RBP17.12■□□□□ 0.33
GTF3C4-201ENST00000372146 TRIM31Q9BZY9 425 aa17.12■□□□□ 0.33
GTF3C4-201ENST00000372146 PPP2R5CQ13362 524 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms