RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 PPEF1O14829 653 aaPredicted RBP31.51■■■□□ 2.63
ATPAF1-202ENST00000371937 GPSM2P81274 684 aa31.51■■■□□ 2.63
ATPAF1-202ENST00000371937 C15orf52Q6ZUT6 534 aaKnown RBP31.51■■■□□ 2.63
ATPAF1-202ENST00000371937 SP8Q8IXZ3 490 aa31.51■■■□□ 2.63
ATPAF1-202ENST00000371937 PODXL2Q9NZ53 605 aa31.51■■■□□ 2.63
ATPAF1-202ENST00000371937 IQSEC3Q9UPP2 1182 aaPredicted RBP31.51■■■□□ 2.63
ATPAF1-202ENST00000371937 IRS2Q9Y4H2 1338 aa31.5■■■□□ 2.63
ATPAF1-202ENST00000371937 M0R2C6 588 aa31.5■■■□□ 2.63
ATPAF1-202ENST00000371937 FRAT2O75474 233 aaPredicted RBP31.5■■■□□ 2.63
ATPAF1-202ENST00000371937 CD2BP2O95400 341 aaKnown RBP31.5■■■□□ 2.63
ATPAF1-202ENST00000371937 PDE6AP16499 860 aa31.5■■■□□ 2.63
ATPAF1-202ENST00000371937 GGA1Q9UJY5 639 aa31.49■■■□□ 2.63
ATPAF1-202ENST00000371937 DOCK2Q92608 1830 aa31.49■■■□□ 2.63
ATPAF1-202ENST00000371937 LRP2BPQ9P2M1 347 aa31.49■■■□□ 2.63
ATPAF1-202ENST00000371937 ATP6V0A2Q9Y487 856 aa31.49■■■□□ 2.63
ATPAF1-202ENST00000371937 SLC27A2O14975 620 aa31.48■■■□□ 2.63
ATPAF1-202ENST00000371937 ZNF532Q9HCE3 1301 aa31.48■■■□□ 2.63
ATPAF1-202ENST00000371937 MCM2P49736 904 aa31.47■■■□□ 2.63
ATPAF1-202ENST00000371937 TM6SF1Q9BZW5 370 aa31.47■■■□□ 2.63
ATPAF1-202ENST00000371937 PUS7LQ9H0K6 701 aaKnown RBP31.47■■■□□ 2.63
ATPAF1-202ENST00000371937 WWC3Q9ULE0 1092 aa31.47■■■□□ 2.63
ATPAF1-202ENST00000371937 H0YIN7 160 aa31.47■■■□□ 2.63
ATPAF1-202ENST00000371937 UFL1O94874 794 aa31.47■■■□□ 2.63
ATPAF1-202ENST00000371937 HSPD1P10809 573 aaKnown RBP31.47■■■□□ 2.63
ATPAF1-202ENST00000371937 TCRBV5S4A2TA0A5A2 114 aa31.46■■■□□ 2.63
ATPAF1-202ENST00000371937 TSGA10IPQ3SY00 556 aa31.46■■■□□ 2.63
ATPAF1-202ENST00000371937 ZNF804AQ7Z570 1209 aa31.46■■■□□ 2.63
ATPAF1-202ENST00000371937 TXNRD3Q86VQ6 643 aa31.46■■■□□ 2.63
ATPAF1-202ENST00000371937 C2CD5Q86YS7 1000 aa31.46■■■□□ 2.63
ATPAF1-202ENST00000371937 MYO5AQ9Y4I1 1855 aaKnown RBP31.45■■■□□ 2.63
ATPAF1-202ENST00000371937 LRRC37AA6NMS7 1700 aa31.45■■■□□ 2.63
ATPAF1-202ENST00000371937 MAGEB6Q8N7X4 407 aa31.45■■■□□ 2.63
ATPAF1-202ENST00000371937 TMX4Q9H1E5 349 aaPredicted RBP31.45■■■□□ 2.63
ATPAF1-202ENST00000371937 STYK1Q6J9G0 422 aa31.45■■■□□ 2.62
ATPAF1-202ENST00000371937 PDGFDQ9GZP0 370 aaPredicted RBP31.45■■■□□ 2.62
ATPAF1-202ENST00000371937 COL1A1P02452 1464 aaPredicted RBP31.44■■■□□ 2.62
ATPAF1-202ENST00000371937 GPAA1O43292 621 aa31.44■■■□□ 2.62
ATPAF1-202ENST00000371937 VPS53Q5VIR6 699 aa31.44■■■□□ 2.62
ATPAF1-202ENST00000371937 SLC51AQ86UW1 340 aa31.44■■■□□ 2.62
ATPAF1-202ENST00000371937 UPF3BQ9BZI7 483 aaKnown RBP31.44■■■□□ 2.62
ATPAF1-202ENST00000371937 ABCF2Q9UG63 623 aa31.44■■■□□ 2.62
ATPAF1-202ENST00000371937 COL11A2P13942 1736 aaPredicted RBP31.43■■■□□ 2.62
ATPAF1-202ENST00000371937 PSMA5P28066 241 aa31.43■■■□□ 2.62
ATPAF1-202ENST00000371937 KRT32Q14532 448 aa31.43■■■□□ 2.62
ATPAF1-202ENST00000371937 ZNF622Q969S3 477 aaKnown RBP eCLIP31.42■■■□□ 2.62
ATPAF1-202ENST00000371937 TBC1D16Q8TBP0 767 aa31.42■■■□□ 2.62
ATPAF1-202ENST00000371937 JAKMIP1Q96N16 626 aaKnown RBP31.42■■■□□ 2.62
ATPAF1-202ENST00000371937 CTNNA3Q9UI47 895 aa31.42■■■□□ 2.62
ATPAF1-202ENST00000371937 CASTP20810 708 aaKnown RBP31.41■■■□□ 2.62
ATPAF1-202ENST00000371937 AIDAQ96BJ3 306 aa31.4■■■□□ 2.62
ATPAF1-202ENST00000371937 ZSWIM6Q9HCJ5 1215 aa31.4■■■□□ 2.62
ATPAF1-202ENST00000371937 RAI14Q9P0K7 980 aa31.4■■■□□ 2.62
ATPAF1-202ENST00000371937 MYH13Q9UKX3 1938 aa31.4■■■□□ 2.62
ATPAF1-202ENST00000371937 ADCK5Q3MIX3 580 aa31.4■■■□□ 2.62
ATPAF1-202ENST00000371937 TDRD7Q8NHU6 1098 aaKnown RBP31.4■■■□□ 2.62
ATPAF1-202ENST00000371937 POLLQ9UGP5 575 aa31.4■■■□□ 2.62
ATPAF1-202ENST00000371937 CYP46A1Q9Y6A2 500 aa31.4■■■□□ 2.62
ATPAF1-202ENST00000371937 C6orf229H3BNL8 230 aa31.39■■■□□ 2.62
ATPAF1-202ENST00000371937 HSP90AA1P07900 732 aaKnown RBP31.39■■■□□ 2.62
ATPAF1-202ENST00000371937 IGSF3O75054 1194 aa31.38■■■□□ 2.61
ATPAF1-202ENST00000371937 TMED8Q6PL24 325 aaPredicted RBP31.38■■■□□ 2.61
ATPAF1-202ENST00000371937 RPAP1Q9BWH6 1393 aaPredicted RBP31.38■■■□□ 2.61
ATPAF1-202ENST00000371937 CYP21A2P08686 494 aa31.38■■■□□ 2.61
ATPAF1-202ENST00000371937 MPNDQ8N594 471 aa31.38■■■□□ 2.61
ATPAF1-202ENST00000371937 ZGPATQ8N5A5 531 aaKnown RBP31.38■■■□□ 2.61
ATPAF1-202ENST00000371937 SPRYD3Q8NCJ5 442 aa31.38■■■□□ 2.61
ATPAF1-202ENST00000371937 CNKSR1Q969H4 720 aa31.38■■■□□ 2.61
ATPAF1-202ENST00000371937 LTBP1Q14766 1721 aa31.38■■■□□ 2.61
ATPAF1-202ENST00000371937 CHAF1AQ13111 956 aaPredicted RBP31.37■■■□□ 2.61
ATPAF1-202ENST00000371937 RUFY3Q7L099 469 aa31.37■■■□□ 2.61
ATPAF1-202ENST00000371937 WDR66Q8TBY9 1149 aa31.37■■■□□ 2.61
ATPAF1-202ENST00000371937 SLKQ9H2G2 1235 aaPredicted RBP31.37■■■□□ 2.61
ATPAF1-202ENST00000371937 SPTY2D1Q68D10 685 aaPredicted RBP31.36■■■□□ 2.61
ATPAF1-202ENST00000371937 GPR101Q96P66 508 aaPredicted RBP31.36■■■□□ 2.61
ATPAF1-202ENST00000371937 STRBPQ96SI9 672 aaKnown RBP31.36■■■□□ 2.61
ATPAF1-202ENST00000371937 TTC14Q96N46 770 aa31.35■■■□□ 2.61
ATPAF1-202ENST00000371937 SALL1Q9NSC2 1324 aa31.35■■■□□ 2.61
ATPAF1-202ENST00000371937 CYP7A1P22680 504 aa31.35■■■□□ 2.61
ATPAF1-202ENST00000371937 CD209Q9NNX6 404 aa31.35■■■□□ 2.61
ATPAF1-202ENST00000371937 FOXP2O15409 715 aa31.34■■■□□ 2.61
ATPAF1-202ENST00000371937 IL1R1P14778 569 aa31.34■■■□□ 2.61
ATPAF1-202ENST00000371937 BLOC1S2Q6QNY1 142 aa31.34■■■□□ 2.61
ATPAF1-202ENST00000371937 DPP8Q6V1X1 898 aaPredicted RBP31.34■■■□□ 2.61
ATPAF1-202ENST00000371937 C10orf71Q711Q0 1435 aa31.34■■■□□ 2.61
ATPAF1-202ENST00000371937 FGAP02671 866 aa31.33■■■□□ 2.61
ATPAF1-202ENST00000371937 GNAT2P19087 354 aa31.33■■■□□ 2.61
ATPAF1-202ENST00000371937 PDRG1Q9NUG6 133 aa31.33■■■□□ 2.61
ATPAF1-202ENST00000371937 MBD4O95243 580 aa31.33■■■□□ 2.61
ATPAF1-202ENST00000371937 CHRNA5P30532 468 aa31.33■■■□□ 2.61
ATPAF1-202ENST00000371937 IMMTQ16891 758 aaKnown RBP31.33■■■□□ 2.61
ATPAF1-202ENST00000371937 NAA16Q6N069 864 aaPredicted RBP31.33■■■□□ 2.61
ATPAF1-202ENST00000371937 TAF6LQ9Y6J9 622 aa31.32■■■□□ 2.6
ATPAF1-202ENST00000371937 NEK1Q96PY6 1258 aa31.31■■■□□ 2.6
ATPAF1-202ENST00000371937 PATL2C9JE40 543 aaKnown RBP31.31■■■□□ 2.6
ATPAF1-202ENST00000371937 APPP05067 770 aa31.31■■■□□ 2.6
ATPAF1-202ENST00000371937 NSUN4Q96CB9 384 aaKnown RBP31.31■■■□□ 2.6
ATPAF1-202ENST00000371937 TMX3Q96JJ7 454 aa31.31■■■□□ 2.6
ATPAF1-202ENST00000371937 HMGB1P09429 215 aaKnown RBP31.3■■■□□ 2.6
ATPAF1-202ENST00000371937 CPA1P15085 419 aa31.3■■■□□ 2.6
ATPAF1-202ENST00000371937 ZC3H12CQ9C0D7 883 aaKnown RBP31.3■■■□□ 2.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms