RNA–Protein interactions for RNA: ENST00000370966.9

DEPDC1-201, Transcript of DEP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1, Length 4,586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-201ENST00000370966 CDCA7Q9BWT1 371 aaPredicted RBP13.52□□□□□ -0.24
DEPDC1-201ENST00000370966 ANKRD2Q9GZV1 360 aa13.52□□□□□ -0.24
DEPDC1-201ENST00000370966 KDM6BO15054 1643 aa13.52□□□□□ -0.24
DEPDC1-201ENST00000370966 CFAP65Q6ZU64 1925 aaKnown RBP13.52□□□□□ -0.24
DEPDC1-201ENST00000370966 MATR3P43243 847 aaKnown RBP eCLIP13.52□□□□□ -0.24
DEPDC1-201ENST00000370966 TCERG1LQ5VWI1 586 aa13.52□□□□□ -0.24
DEPDC1-201ENST00000370966 FAM89AQ96GI7 184 aa13.52□□□□□ -0.24
DEPDC1-201ENST00000370966 TOM1O60784 492 aa13.52□□□□□ -0.25
DEPDC1-201ENST00000370966 USP8P40818 1118 aa13.52□□□□□ -0.25
DEPDC1-201ENST00000370966 ZNF804AQ7Z570 1209 aa13.52□□□□□ -0.25
DEPDC1-201ENST00000370966 TAX1BP1Q86VP1 789 aa13.52□□□□□ -0.25
DEPDC1-201ENST00000370966 FAM135BQ49AJ0 1406 aa13.51□□□□□ -0.25
DEPDC1-201ENST00000370966 RILPL1Q5EBL4 403 aa13.51□□□□□ -0.25
DEPDC1-201ENST00000370966 PPP4R3AQ6IN85 833 aa13.51□□□□□ -0.25
DEPDC1-201ENST00000370966 KRI1Q8N9T8 703 aaKnown RBP13.51□□□□□ -0.25
DEPDC1-201ENST00000370966 C6orf50Q9HD87 102 aa13.51□□□□□ -0.25
DEPDC1-201ENST00000370966 SAMD9LQ8IVG5 1584 aa13.51□□□□□ -0.25
DEPDC1-201ENST00000370966 FAM227BQ96M60 508 aa13.51□□□□□ -0.25
DEPDC1-201ENST00000370966 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.51□□□□□ -0.25
DEPDC1-201ENST00000370966 DNAI1Q9UI46 699 aa13.51□□□□□ -0.25
DEPDC1-201ENST00000370966 TTC37Q6PGP7 1564 aa13.51□□□□□ -0.25
DEPDC1-201ENST00000370966 KRT2P35908 639 aa13.51□□□□□ -0.25
DEPDC1-201ENST00000370966 ENOX2Q16206 610 aaKnown RBP13.51□□□□□ -0.25
DEPDC1-201ENST00000370966 IL17REQ8NFR9 667 aa13.51□□□□□ -0.25
DEPDC1-201ENST00000370966 DHX58Q96C10 678 aa13.51□□□□□ -0.25
DEPDC1-201ENST00000370966 ZNF496Q96IT1 587 aaPredicted RBP13.51□□□□□ -0.25
DEPDC1-201ENST00000370966 HEATR3Q7Z4Q2 680 aa13.51□□□□□ -0.25
DEPDC1-201ENST00000370966 FEZ1Q99689 392 aa13.51□□□□□ -0.25
DEPDC1-201ENST00000370966 ATP5JP18859 108 aa13.5□□□□□ -0.25
DEPDC1-201ENST00000370966 NAPAP54920 295 aa13.5□□□□□ -0.25
DEPDC1-201ENST00000370966 PUM3Q15397 648 aaKnown RBP13.5□□□□□ -0.25
DEPDC1-201ENST00000370966 IQUBQ8NA54 791 aa13.5□□□□□ -0.25
DEPDC1-201ENST00000370966 KLHDC4Q8TBB5 520 aa13.5□□□□□ -0.25
DEPDC1-201ENST00000370966 RBM28Q9NW13 759 aaKnown RBP13.5□□□□□ -0.25
DEPDC1-201ENST00000370966 ANGEL1Q9UNK9 670 aaKnown RBP13.5□□□□□ -0.25
DEPDC1-201ENST00000370966 ELP1O95163 1332 aa13.5□□□□□ -0.25
DEPDC1-201ENST00000370966 SHTN1A0MZ66 631 aa13.5□□□□□ -0.25
DEPDC1-201ENST00000370966 PDE8AO60658 829 aa13.5□□□□□ -0.25
DEPDC1-201ENST00000370966 ZRSR2Q15696 482 aaKnown RBP13.5□□□□□ -0.25
DEPDC1-201ENST00000370966 MCM9Q9NXL9 1143 aa13.5□□□□□ -0.25
DEPDC1-201ENST00000370966 GIGYF1O75420 1035 aaPredicted RBP13.5□□□□□ -0.25
DEPDC1-201ENST00000370966 MBD4O95243 580 aa13.5□□□□□ -0.25
DEPDC1-201ENST00000370966 ITGA6P23229 1130 aa13.5□□□□□ -0.25
DEPDC1-201ENST00000370966 MIGA1Q8NAN2 632 aa13.5□□□□□ -0.25
DEPDC1-201ENST00000370966 RBSNQ9H1K0 784 aa13.5□□□□□ -0.25
DEPDC1-201ENST00000370966 DENND2AQ9ULE3 1009 aa13.5□□□□□ -0.25
DEPDC1-201ENST00000370966 ERICH4A6NGS2 130 aa13.49□□□□□ -0.25
DEPDC1-201ENST00000370966 BRD1O95696 1058 aa13.49□□□□□ -0.25
DEPDC1-201ENST00000370966 CCDC175P0C221 793 aa13.49□□□□□ -0.25
DEPDC1-201ENST00000370966 GSPT1P15170 499 aaKnown RBP13.49□□□□□ -0.25
DEPDC1-201ENST00000370966 GNA11P29992 359 aa13.49□□□□□ -0.25
DEPDC1-201ENST00000370966 SSR1P43307 286 aaKnown RBP13.49□□□□□ -0.25
DEPDC1-201ENST00000370966 TUBB4BP68371 445 aa13.49□□□□□ -0.25
DEPDC1-201ENST00000370966 IFI16Q16666 785 aaKnown RBP13.49□□□□□ -0.25
DEPDC1-201ENST00000370966 XAGE2Q96GT9 111 aa13.49□□□□□ -0.25
DEPDC1-201ENST00000370966 TBCAO75347 108 aaKnown RBP13.49□□□□□ -0.25
DEPDC1-201ENST00000370966 SLU7O95391 586 aaKnown RBP13.49□□□□□ -0.25
DEPDC1-201ENST00000370966 CKAP4Q07065 602 aaKnown RBP13.49□□□□□ -0.25
DEPDC1-201ENST00000370966 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.49□□□□□ -0.25
DEPDC1-201ENST00000370966 RTCBQ9Y3I0 505 aaKnown RBP13.49□□□□□ -0.25
DEPDC1-201ENST00000370966 CCDC172P0C7W6 258 aa13.49□□□□□ -0.25
DEPDC1-201ENST00000370966 MYL5Q02045 173 aa13.49□□□□□ -0.25
DEPDC1-201ENST00000370966 SLC4A8Q2Y0W8 1093 aa13.49□□□□□ -0.25
DEPDC1-201ENST00000370966 CCDC129Q6ZRS4 1044 aa13.49□□□□□ -0.25
DEPDC1-201ENST00000370966 LMBRD1Q9NUN5 540 aa13.49□□□□□ -0.25
DEPDC1-201ENST00000370966 MLH3Q9UHC1 1453 aa13.49□□□□□ -0.25
DEPDC1-201ENST00000370966 GPAA1O43292 621 aa13.48□□□□□ -0.25
DEPDC1-201ENST00000370966 PTGS1P23219 599 aa13.48□□□□□ -0.25
DEPDC1-201ENST00000370966 LTKP29376 864 aa13.48□□□□□ -0.25
DEPDC1-201ENST00000370966 ASIC1P78348 528 aa13.48□□□□□ -0.25
DEPDC1-201ENST00000370966 SPAG5Q96R06 1193 aa13.48□□□□□ -0.25
DEPDC1-201ENST00000370966 JADE2Q9NQC1 790 aa13.48□□□□□ -0.25
DEPDC1-201ENST00000370966 PPP2R5BQ15173 497 aa13.48□□□□□ -0.25
DEPDC1-201ENST00000370966 CLASP1Q7Z460 1538 aa13.48□□□□□ -0.25
DEPDC1-201ENST00000370966 ATP7BP35670 1465 aa13.48□□□□□ -0.25
DEPDC1-201ENST00000370966 A1BGP04217 495 aa13.48□□□□□ -0.25
DEPDC1-201ENST00000370966 ARFGAP3Q9NP61 516 aa13.48□□□□□ -0.25
DEPDC1-201ENST00000370966 IFNKQ9P0W0 207 aa13.48□□□□□ -0.25
DEPDC1-201ENST00000370966 ZFYVE16Q7Z3T8 1539 aa13.48□□□□□ -0.25
DEPDC1-201ENST00000370966 CFAP74Q9C0B2 1584 aa13.48□□□□□ -0.25
DEPDC1-201ENST00000370966 DEXIO95424 95 aa13.47□□□□□ -0.25
DEPDC1-201ENST00000370966 HSP90AA4PQ58FG1 418 aa13.47□□□□□ -0.25
DEPDC1-201ENST00000370966 ANO1Q5XXA6 986 aa13.47□□□□□ -0.25
DEPDC1-201ENST00000370966 CALCOCO1Q9P1Z2 691 aa13.47□□□□□ -0.25
DEPDC1-201ENST00000370966 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.47□□□□□ -0.25
DEPDC1-201ENST00000370966 A0A1B0GVL5 298 aa13.47□□□□□ -0.25
DEPDC1-201ENST00000370966 CTAGE15A4D2H0 777 aa13.47□□□□□ -0.25
DEPDC1-201ENST00000370966 NEURL1BA8MQ27 555 aa13.47□□□□□ -0.25
DEPDC1-201ENST00000370966 TMCO5BA8MYB1 307 aa13.47□□□□□ -0.25
DEPDC1-201ENST00000370966 LDHBP07195 334 aaKnown RBP13.47□□□□□ -0.25
DEPDC1-201ENST00000370966 CTAGE8P0CG41 777 aa13.47□□□□□ -0.25
DEPDC1-201ENST00000370966 NOP2P46087 812 aaKnown RBP13.47□□□□□ -0.25
DEPDC1-201ENST00000370966 KRT79Q5XKE5 535 aa13.47□□□□□ -0.25
DEPDC1-201ENST00000370966 CTAGE6Q86UF2 777 aa13.47□□□□□ -0.25
DEPDC1-201ENST00000370966 CTAGE4Q8IX94 777 aa13.47□□□□□ -0.25
DEPDC1-201ENST00000370966 ZC3H12CQ9C0D7 883 aaKnown RBP13.47□□□□□ -0.25
DEPDC1-201ENST00000370966 TAOK3Q9H2K8 898 aa13.47□□□□□ -0.25
DEPDC1-201ENST00000370966 TMX1Q9H3N1 280 aa13.47□□□□□ -0.25
DEPDC1-201ENST00000370966 CLSTN2Q9H4D0 955 aa13.47□□□□□ -0.25
DEPDC1-201ENST00000370966 ERBB4Q15303 1308 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms