RNA–Protein interactions for RNA: ENST00000360299.9

RAB5B-201, Transcript of RAB5B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5B, Length 5,340 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-201ENST00000360299 GNAT2P19087 354 aa8.16□□□□□ -1.1
RAB5B-201ENST00000360299 MAP3K11Q16584 847 aa8.16□□□□□ -1.1
RAB5B-201ENST00000360299 ARMC9Q7Z3E5 817 aa8.16□□□□□ -1.1
RAB5B-201ENST00000360299 DPEP1P16444 411 aa8.16□□□□□ -1.1
RAB5B-201ENST00000360299 FNBP4Q8N3X1 1017 aaPredicted RBP8.16□□□□□ -1.1
RAB5B-201ENST00000360299 KRT23Q9C075 422 aa8.16□□□□□ -1.1
RAB5B-201ENST00000360299 ZSCAN16Q9H4T2 348 aaPredicted RBP8.16□□□□□ -1.1
RAB5B-201ENST00000360299 GRPEL1Q9HAV7 217 aa8.16□□□□□ -1.1
RAB5B-201ENST00000360299 KRT18P05783 430 aaKnown RBP8.15□□□□□ -1.1
RAB5B-201ENST00000360299 CA8P35219 290 aa8.15□□□□□ -1.1
RAB5B-201ENST00000360299 SCNN1DP51172 638 aa8.15□□□□□ -1.1
RAB5B-201ENST00000360299 MFSD6Q6ZSS7 791 aa8.15□□□□□ -1.1
RAB5B-201ENST00000360299 PLEKHM2Q8IWE5 1019 aa8.15□□□□□ -1.1
RAB5B-201ENST00000360299 CCDC12Q8WUD4 166 aaPredicted RBP8.15□□□□□ -1.1
RAB5B-201ENST00000360299 DDX11Q96FC9 970 aa8.15□□□□□ -1.1
RAB5B-201ENST00000360299 MED14O60244 1454 aa8.15□□□□□ -1.1
RAB5B-201ENST00000360299 MAP3K15Q6ZN16 1313 aa8.15□□□□□ -1.1
RAB5B-201ENST00000360299 SSRP1Q08945 709 aaKnown RBP8.15□□□□□ -1.1
RAB5B-201ENST00000360299 IL17REQ8NFR9 667 aa8.15□□□□□ -1.1
RAB5B-201ENST00000360299 MPHOSPH6Q99547 160 aaKnown RBP8.15□□□□□ -1.1
RAB5B-201ENST00000360299 MAST3O60307 1309 aa8.15□□□□□ -1.1
RAB5B-201ENST00000360299 BRPF1P55201 1214 aaPredicted RBP8.15□□□□□ -1.11
RAB5B-201ENST00000360299 EIF4A1P60842 406 aaKnown RBP8.15□□□□□ -1.11
RAB5B-201ENST00000360299 TTLL5Q6EMB2 1281 aa8.15□□□□□ -1.11
RAB5B-201ENST00000360299 TXLNBQ8N3L3 684 aa8.15□□□□□ -1.11
RAB5B-201ENST00000360299 PYM1Q9BRP8 204 aaKnown RBP8.15□□□□□ -1.11
RAB5B-201ENST00000360299 GOLGA8AA7E2F4 631 aa8.15□□□□□ -1.11
RAB5B-201ENST00000360299 GOLGA8BA8MQT2 603 aa8.15□□□□□ -1.11
RAB5B-201ENST00000360299 CAVIN2O95810 425 aa8.15□□□□□ -1.11
RAB5B-201ENST00000360299 ZYXQ15942 572 aaKnown RBP8.15□□□□□ -1.11
RAB5B-201ENST00000360299 C9orf131Q5VYM1 1079 aa8.15□□□□□ -1.11
RAB5B-201ENST00000360299 NARFQ9UHQ1 456 aa8.15□□□□□ -1.11
RAB5B-201ENST00000360299 TTF2Q9UNY4 1162 aaKnown RBP8.15□□□□□ -1.11
RAB5B-201ENST00000360299 STX6O43752 255 aa8.14□□□□□ -1.11
RAB5B-201ENST00000360299 ATP2B4P23634 1241 aa8.14□□□□□ -1.11
RAB5B-201ENST00000360299 RAB3GAP1Q15042 981 aa8.14□□□□□ -1.11
RAB5B-201ENST00000360299 CC2D2BQ6DHV5 1058 aa8.14□□□□□ -1.11
RAB5B-201ENST00000360299 RAB34Q9BZG1 259 aa8.14□□□□□ -1.11
RAB5B-201ENST00000360299 TNNQ9UQP3 1299 aa8.14□□□□□ -1.11
RAB5B-201ENST00000360299 CLRN2A0PK11 232 aa8.14□□□□□ -1.11
RAB5B-201ENST00000360299 TRAF1Q13077 416 aa8.14□□□□□ -1.11
RAB5B-201ENST00000360299 TBC1D10BQ4KMP7 808 aaPredicted RBP8.14□□□□□ -1.11
RAB5B-201ENST00000360299 CCDC183Q5T5S1 534 aa8.14□□□□□ -1.11
RAB5B-201ENST00000360299 USP48Q86UV5 1035 aa8.14□□□□□ -1.11
RAB5B-201ENST00000360299 LUC7LQ9NQ29 371 aaKnown RBP8.14□□□□□ -1.11
RAB5B-201ENST00000360299 DDX19AQ9NUU7 478 aaKnown RBP8.14□□□□□ -1.11
RAB5B-201ENST00000360299 IARSP41252 1262 aaKnown RBP8.14□□□□□ -1.11
RAB5B-201ENST00000360299 IRX3P78415 501 aaPredicted RBP8.14□□□□□ -1.11
RAB5B-201ENST00000360299 GADL1Q6ZQY3 521 aa8.14□□□□□ -1.11
RAB5B-201ENST00000360299 SYNE4Q8N205 404 aa8.14□□□□□ -1.11
RAB5B-201ENST00000360299 ZNF592Q92610 1267 aa8.14□□□□□ -1.11
RAB5B-201ENST00000360299 ZNHIT6Q9NWK9 470 aaKnown RBP8.14□□□□□ -1.11
RAB5B-201ENST00000360299 C8orf34Q49A92 452 aa8.14□□□□□ -1.11
RAB5B-201ENST00000360299 ZNF594Q96JF6 807 aaPredicted RBP8.14□□□□□ -1.11
RAB5B-201ENST00000360299 PAG1Q9NWQ8 432 aa8.14□□□□□ -1.11
RAB5B-201ENST00000360299 SPATA31D1Q6ZQQ2 1576 aa8.14□□□□□ -1.11
RAB5B-201ENST00000360299 SERPINC1P01008 464 aa8.13□□□□□ -1.11
RAB5B-201ENST00000360299 PLCG2P16885 1265 aa8.13□□□□□ -1.11
RAB5B-201ENST00000360299 TMEM67Q5HYA8 995 aa8.13□□□□□ -1.11
RAB5B-201ENST00000360299 MFSD14BQ5SR56 506 aa8.13□□□□□ -1.11
RAB5B-201ENST00000360299 PLEKHF1Q96S99 279 aa8.13□□□□□ -1.11
RAB5B-201ENST00000360299 RBM8AQ9Y5S9 174 aaKnown RBP8.13□□□□□ -1.11
RAB5B-201ENST00000360299 GNAQP50148 359 aa8.13□□□□□ -1.11
RAB5B-201ENST00000360299 CCAR2Q8N163 923 aaKnown RBP8.13□□□□□ -1.11
RAB5B-201ENST00000360299 PDILTQ8N807 584 aa8.13□□□□□ -1.11
RAB5B-201ENST00000360299 ANO10Q9NW15 660 aa8.13□□□□□ -1.11
RAB5B-201ENST00000360299 ARGLU1Q9NWB6 273 aaPredicted RBP8.13□□□□□ -1.11
RAB5B-201ENST00000360299 SAP30BPQ9UHR5 308 aaKnown RBP8.13□□□□□ -1.11
RAB5B-201ENST00000360299 COL15A1P39059 1388 aa8.13□□□□□ -1.11
RAB5B-201ENST00000360299 DIP2AQ14689 1571 aa8.13□□□□□ -1.11
RAB5B-201ENST00000360299 EYA2O00167 538 aa8.13□□□□□ -1.11
RAB5B-201ENST00000360299 BBOX1O75936 387 aa8.13□□□□□ -1.11
RAB5B-201ENST00000360299 BMP15O95972 392 aa8.13□□□□□ -1.11
RAB5B-201ENST00000360299 G2E3Q7L622 706 aa8.13□□□□□ -1.11
RAB5B-201ENST00000360299 COL23A1Q86Y22 540 aaPredicted RBP8.13□□□□□ -1.11
RAB5B-201ENST00000360299 TEX11Q8IYF3 940 aa8.13□□□□□ -1.11
RAB5B-201ENST00000360299 ESR2Q92731 530 aa8.13□□□□□ -1.11
RAB5B-201ENST00000360299 TNPO1Q92973 898 aaKnown RBP8.13□□□□□ -1.11
RAB5B-201ENST00000360299 TBC1D9BQ66K14 1250 aa8.13□□□□□ -1.11
RAB5B-201ENST00000360299 MNS1Q8NEH6 495 aa8.13□□□□□ -1.11
RAB5B-201ENST00000360299 TMX3Q96JJ7 454 aa8.13□□□□□ -1.11
RAB5B-201ENST00000360299 RBM27Q9P2N5 1060 aaKnown RBP8.13□□□□□ -1.11
RAB5B-201ENST00000360299 TSPY2A6NKD2 308 aa8.12□□□□□ -1.11
RAB5B-201ENST00000360299 RNF113AO15541 343 aaKnown RBP8.12□□□□□ -1.11
RAB5B-201ENST00000360299 CNGA1P29973 690 aa8.12□□□□□ -1.11
RAB5B-201ENST00000360299 MIGA1Q8NAN2 632 aa8.12□□□□□ -1.11
RAB5B-201ENST00000360299 INTS4Q96HW7 963 aaKnown RBP8.12□□□□□ -1.11
RAB5B-201ENST00000360299 BICC1Q9H694 974 aaKnown RBP8.12□□□□□ -1.11
RAB5B-201ENST00000360299 HACL1Q9UJ83 578 aa8.12□□□□□ -1.11
RAB5B-201ENST00000360299 ABCC4O15439 1325 aa8.12□□□□□ -1.11
RAB5B-201ENST00000360299 NFIXQ14938 502 aa8.12□□□□□ -1.11
RAB5B-201ENST00000360299 FERMT3Q86UX7 667 aa8.12□□□□□ -1.11
RAB5B-201ENST00000360299 PPFIBP1Q86W92 1011 aa8.12□□□□□ -1.11
RAB5B-201ENST00000360299 SLC10A4Q96EP9 437 aa8.12□□□□□ -1.11
RAB5B-201ENST00000360299 TANGO6Q9C0B7 1094 aa8.12□□□□□ -1.11
RAB5B-201ENST00000360299 ORC3Q9UBD5 711 aaPredicted RBP8.12□□□□□ -1.11
RAB5B-201ENST00000360299 DENND2AQ9ULE3 1009 aa8.12□□□□□ -1.11
RAB5B-201ENST00000360299 COL3A1P02461 1466 aaPredicted RBP8.12□□□□□ -1.11
RAB5B-201ENST00000360299 GJB2P29033 226 aa8.12□□□□□ -1.11
RAB5B-201ENST00000360299 AOC3Q16853 763 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms