RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 CRCPO75575 148 aa18.08■□□□□ 0.49
COL18A1-203ENST00000359759 PCK1P35558 622 aa18.08■□□□□ 0.49
COL18A1-203ENST00000359759 MCMDC2Q4G0Z9 681 aa18.08■□□□□ 0.49
COL18A1-203ENST00000359759 PPFIBP2Q8ND30 876 aa18.08■□□□□ 0.49
COL18A1-203ENST00000359759 PPP1R12CQ9BZL4 782 aa18.08■□□□□ 0.49
COL18A1-203ENST00000359759 PFDN4Q9NQP4 134 aa18.08■□□□□ 0.49
COL18A1-203ENST00000359759 OGFRQ9NZT2 677 aa18.08■□□□□ 0.49
COL18A1-203ENST00000359759 POGZQ7Z3K3 1410 aa18.08■□□□□ 0.49
COL18A1-203ENST00000359759 BUB1BO60566 1050 aaPredicted RBP18.08■□□□□ 0.48
COL18A1-203ENST00000359759 ARID4AP29374 1257 aaPredicted RBP18.08■□□□□ 0.48
COL18A1-203ENST00000359759 ESR2Q92731 530 aa18.08■□□□□ 0.48
COL18A1-203ENST00000359759 MEIS3Q99687 375 aa18.08■□□□□ 0.48
COL18A1-203ENST00000359759 MKRN1Q9UHC7 482 aaKnown RBP18.08■□□□□ 0.48
COL18A1-203ENST00000359759 PIK3R4Q99570 1358 aa18.08■□□□□ 0.48
COL18A1-203ENST00000359759 PSMD6Q15008 389 aa18.08■□□□□ 0.48
COL18A1-203ENST00000359759 AFAP1L1Q8TED9 768 aa18.08■□□□□ 0.48
COL18A1-203ENST00000359759 SLC52A1Q9NWF4 448 aa18.08■□□□□ 0.48
COL18A1-203ENST00000359759 HSPA1LP34931 641 aa18.08■□□□□ 0.48
COL18A1-203ENST00000359759 EVCP57679 992 aa18.08■□□□□ 0.48
COL18A1-203ENST00000359759 FAM114A2Q9NRY5 505 aa18.08■□□□□ 0.48
COL18A1-203ENST00000359759 ZFYP08048 801 aaPredicted RBP18.07■□□□□ 0.48
COL18A1-203ENST00000359759 GSTO1P78417 241 aa18.07■□□□□ 0.48
COL18A1-203ENST00000359759 CCDC122Q5T0U0 273 aa18.07■□□□□ 0.48
COL18A1-203ENST00000359759 KRT9P35527 623 aa18.07■□□□□ 0.48
COL18A1-203ENST00000359759 SEL1L2Q5TEA6 688 aa18.07■□□□□ 0.48
COL18A1-203ENST00000359759 GKAP1Q5VSY0 366 aaPredicted RBP18.07■□□□□ 0.48
COL18A1-203ENST00000359759 MPHOSPH6Q99547 160 aaKnown RBP18.07■□□□□ 0.48
COL18A1-203ENST00000359759 TNNC1P63316 161 aa18.07■□□□□ 0.48
COL18A1-203ENST00000359759 GMNNO75496 209 aa18.07■□□□□ 0.48
COL18A1-203ENST00000359759 BMP15O95972 392 aa18.07■□□□□ 0.48
COL18A1-203ENST00000359759 ATP2B3Q16720 1220 aa18.07■□□□□ 0.48
COL18A1-203ENST00000359759 GPIHBP1Q8IV16 184 aa18.07■□□□□ 0.48
COL18A1-203ENST00000359759 CHPF2Q9P2E5 772 aa18.07■□□□□ 0.48
COL18A1-203ENST00000359759 SP4Q02446 784 aa18.07■□□□□ 0.48
COL18A1-203ENST00000359759 CPSF2Q9P2I0 782 aaKnown RBP18.07■□□□□ 0.48
COL18A1-203ENST00000359759 AGTPBP1Q9UPW5 1226 aa18.07■□□□□ 0.48
COL18A1-203ENST00000359759 A0A1B0GUL7 405 aa18.06■□□□□ 0.48
COL18A1-203ENST00000359759 BICDL2A1A5D9 508 aa18.06■□□□□ 0.48
COL18A1-203ENST00000359759 GRIN2BQ13224 1484 aa18.06■□□□□ 0.48
COL18A1-203ENST00000359759 DAPK1P53355 1430 aa18.06■□□□□ 0.48
COL18A1-203ENST00000359759 TSGA10Q9BZW7 698 aa18.06■□□□□ 0.48
COL18A1-203ENST00000359759 FAM170AA1A519 330 aa18.06■□□□□ 0.48
COL18A1-203ENST00000359759 KIF3CO14782 793 aa18.06■□□□□ 0.48
COL18A1-203ENST00000359759 UQCRFS1P1P0C7P4 283 aa18.06■□□□□ 0.48
COL18A1-203ENST00000359759 TNNI2P48788 182 aa18.06■□□□□ 0.48
COL18A1-203ENST00000359759 FEZ2Q9UHY8 353 aaPredicted RBP18.06■□□□□ 0.48
COL18A1-203ENST00000359759 TRIM75PA6NK02 468 aa18.06■□□□□ 0.48
COL18A1-203ENST00000359759 ZGPATQ8N5A5 531 aaKnown RBP18.06■□□□□ 0.48
COL18A1-203ENST00000359759 NKIRAS1Q9NYS0 192 aa18.06■□□□□ 0.48
COL18A1-203ENST00000359759 ALDH3A1P30838 453 aa18.06■□□□□ 0.48
COL18A1-203ENST00000359759 ZNF131P52739 623 aa18.06■□□□□ 0.48
COL18A1-203ENST00000359759 CALCOCO2Q13137 446 aa18.06■□□□□ 0.48
COL18A1-203ENST00000359759 GRM1Q13255 1194 aa18.06■□□□□ 0.48
COL18A1-203ENST00000359759 PDE1CQ14123 709 aaPredicted RBP18.06■□□□□ 0.48
COL18A1-203ENST00000359759 CNNM2Q9H8M5 875 aa18.06■□□□□ 0.48
COL18A1-203ENST00000359759 NEDD9Q14511 834 aa18.05■□□□□ 0.48
COL18A1-203ENST00000359759 UTP14CQ5TAP6 766 aaKnown RBP18.05■□□□□ 0.48
COL18A1-203ENST00000359759 VPS52Q8N1B4 723 aa18.05■□□□□ 0.48
COL18A1-203ENST00000359759 BAG1Q99933 345 aaPredicted RBP18.05■□□□□ 0.48
COL18A1-203ENST00000359759 AK2P54819 239 aa18.05■□□□□ 0.48
COL18A1-203ENST00000359759 CCT6BQ92526 530 aa18.05■□□□□ 0.48
COL18A1-203ENST00000359759 CLNS1AP54105 237 aaKnown RBP18.05■□□□□ 0.48
COL18A1-203ENST00000359759 PDE1AP54750 535 aa18.05■□□□□ 0.48
COL18A1-203ENST00000359759 ARAP1Q96P48 1450 aa18.05■□□□□ 0.48
COL18A1-203ENST00000359759 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.05■□□□□ 0.48
COL18A1-203ENST00000359759 PPANQ9NQ55 473 aaKnown RBP18.05■□□□□ 0.48
COL18A1-203ENST00000359759 LONRF3Q496Y0 759 aa18.05■□□□□ 0.48
COL18A1-203ENST00000359759 LEO1Q8WVC0 666 aaPredicted RBP18.05■□□□□ 0.48
COL18A1-203ENST00000359759 PKD2L1Q9P0L9 805 aa18.04■□□□□ 0.48
COL18A1-203ENST00000359759 PA2G4Q9UQ80 394 aaKnown RBP18.04■□□□□ 0.48
COL18A1-203ENST00000359759 FBLN1P23142 703 aa18.04■□□□□ 0.48
COL18A1-203ENST00000359759 SLC9C2Q5TAH2 1124 aa18.04■□□□□ 0.48
COL18A1-203ENST00000359759 ARHGEF2Q92974 986 aaKnown RBP18.04■□□□□ 0.48
COL18A1-203ENST00000359759 C6orf50Q9HD87 102 aa18.04■□□□□ 0.48
COL18A1-203ENST00000359759 KRT79Q5XKE5 535 aa18.04■□□□□ 0.48
COL18A1-203ENST00000359759 MIGA1Q8NAN2 632 aa18.04■□□□□ 0.48
COL18A1-203ENST00000359759 LUC7L2Q9Y383 392 aaKnown RBP18.04■□□□□ 0.48
COL18A1-203ENST00000359759 SUPT6HQ7KZ85 1726 aaKnown RBP18.04■□□□□ 0.48
COL18A1-203ENST00000359759 MAGEB6P1A0A0J9YX57 407 aa18.03■□□□□ 0.48
COL18A1-203ENST00000359759 AKR1B15C9JRZ8 316 aaPredicted RBP18.03■□□□□ 0.48
COL18A1-203ENST00000359759 CCDC152Q4G0S7 254 aa18.03■□□□□ 0.48
COL18A1-203ENST00000359759 CCDC170Q8IYT3 715 aa18.03■□□□□ 0.48
COL18A1-203ENST00000359759 RRP36Q96EU6 259 aaKnown RBP18.03■□□□□ 0.48
COL18A1-203ENST00000359759 ZKSCAN3Q9BRR0 538 aa18.03■□□□□ 0.48
COL18A1-203ENST00000359759 MTUS1Q9ULD2 1270 aa18.03■□□□□ 0.48
COL18A1-203ENST00000359759 GBP1P32455 592 aa18.03■□□□□ 0.48
COL18A1-203ENST00000359759 TRIM31Q9BZY9 425 aa18.03■□□□□ 0.48
COL18A1-203ENST00000359759 CAMSAP2Q08AD1 1489 aa18.03■□□□□ 0.48
COL18A1-203ENST00000359759 A0A1B0GVL5 298 aa18.03■□□□□ 0.48
COL18A1-203ENST00000359759 SATB1Q01826 763 aa18.03■□□□□ 0.48
COL18A1-203ENST00000359759 CCDC14Q49A88 953 aa18.03■□□□□ 0.48
COL18A1-203ENST00000359759 FMNL3Q8IVF7 1028 aa18.03■□□□□ 0.48
COL18A1-203ENST00000359759 SIRT1Q96EB6 747 aa18.03■□□□□ 0.48
COL18A1-203ENST00000359759 RFC4P35249 363 aa18.03■□□□□ 0.48
COL18A1-203ENST00000359759 PPP2R5CQ13362 524 aa18.03■□□□□ 0.48
COL18A1-203ENST00000359759 NAA16Q6N069 864 aaPredicted RBP18.03■□□□□ 0.48
COL18A1-203ENST00000359759 TMTC2Q8N394 836 aa18.03■□□□□ 0.48
COL18A1-203ENST00000359759 E7EVH7 732 aa18.02■□□□□ 0.48
COL18A1-203ENST00000359759 SARNPP82979 210 aaKnown RBP18.02■□□□□ 0.48
COL18A1-203ENST00000359759 FOXO3O43524 673 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms