RNA–Protein interactions for RNA: ENST00000357365.7

SDCCAG3-202, Transcript of Serologically defined colon cancer antigen 3, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SDCCAG3, Length 2,304 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-202ENST00000357365 LY75O60449 1722 aa33.89■■■■□ 3.02
SDCCAG3-202ENST00000357365 PDE6AP16499 860 aa33.88■■■■□ 3.01
SDCCAG3-202ENST00000357365 EXOSC10Q01780 885 aaKnown RBP33.88■■■■□ 3.01
SDCCAG3-202ENST00000357365 RTCBQ9Y3I0 505 aaKnown RBP33.88■■■■□ 3.01
SDCCAG3-202ENST00000357365 SF3B3Q15393 1217 aaKnown RBP33.88■■■■□ 3.01
SDCCAG3-202ENST00000357365 CDC5LQ99459 802 aaKnown RBP33.88■■■■□ 3.01
SDCCAG3-202ENST00000357365 VPS37CA5D8V6 355 aaPredicted RBP33.87■■■■□ 3.01
SDCCAG3-202ENST00000357365 ZPR1O75312 459 aa33.87■■■■□ 3.01
SDCCAG3-202ENST00000357365 FGD1P98174 961 aa33.87■■■■□ 3.01
SDCCAG3-202ENST00000357365 PHF14O94880 888 aa33.87■■■■□ 3.01
SDCCAG3-202ENST00000357365 GTF3C6Q969F1 213 aa33.87■■■■□ 3.01
SDCCAG3-202ENST00000357365 PANK2Q9BZ23 570 aa33.87■■■■□ 3.01
SDCCAG3-202ENST00000357365 CNPY2Q9Y2B0 182 aa33.87■■■■□ 3.01
SDCCAG3-202ENST00000357365 TCRBV5S4A2TA0A5A2 114 aa33.86■■■■□ 3.01
SDCCAG3-202ENST00000357365 JAK2O60674 1132 aa33.86■■■■□ 3.01
SDCCAG3-202ENST00000357365 HMGB1P09429 215 aaKnown RBP33.86■■■■□ 3.01
SDCCAG3-202ENST00000357365 ZSCAN25Q6NSZ9 544 aa33.86■■■■□ 3.01
SDCCAG3-202ENST00000357365 CELF1Q92879 486 aaKnown RBP33.86■■■■□ 3.01
SDCCAG3-202ENST00000357365 SETDB2Q96T68 719 aa33.86■■■■□ 3.01
SDCCAG3-202ENST00000357365 ATRNO75882 1429 aa33.86■■■■□ 3.01
SDCCAG3-202ENST00000357365 ONECUT3O60422 494 aaPredicted RBP33.86■■■■□ 3.01
SDCCAG3-202ENST00000357365 GADD45BO75293 160 aaPredicted RBP33.86■■■■□ 3.01
SDCCAG3-202ENST00000357365 APOBRQ0VD83 1088 aa33.86■■■■□ 3.01
SDCCAG3-202ENST00000357365 ANKRD18AQ8IVF6 992 aa33.86■■■■□ 3.01
SDCCAG3-202ENST00000357365 IQSEC3Q9UPP2 1182 aaPredicted RBP33.86■■■■□ 3.01
SDCCAG3-202ENST00000357365 LARP1BQ659C4 914 aaKnown RBP33.85■■■■□ 3.01
SDCCAG3-202ENST00000357365 USP48Q86UV5 1035 aa33.85■■■■□ 3.01
SDCCAG3-202ENST00000357365 UBE3CQ15386 1083 aa33.85■■■■□ 3.01
SDCCAG3-202ENST00000357365 TRPC5Q9UL62 973 aaPredicted RBP33.85■■■■□ 3.01
SDCCAG3-202ENST00000357365 A0A1B0GUL6 1792 aa33.84■■■■□ 3.01
SDCCAG3-202ENST00000357365 NBPF5PQ86XG9 351 aaPredicted RBP33.84■■■■□ 3.01
SDCCAG3-202ENST00000357365 SCRN1Q12765 414 aa33.84■■■■□ 3.01
SDCCAG3-202ENST00000357365 IMMTQ16891 758 aaKnown RBP33.84■■■■□ 3.01
SDCCAG3-202ENST00000357365 GPHNQ9NQX3 736 aaPredicted RBP33.84■■■■□ 3.01
SDCCAG3-202ENST00000357365 CTNNA3Q9UI47 895 aa33.84■■■■□ 3.01
SDCCAG3-202ENST00000357365 SLC10A5Q5PT55 438 aa33.83■■■■□ 3.01
SDCCAG3-202ENST00000357365 LRRC4BQ9NT99 713 aa33.83■■■■□ 3.01
SDCCAG3-202ENST00000357365 DOCK2Q92608 1830 aa33.83■■■■□ 3.01
SDCCAG3-202ENST00000357365 ZSCAN23Q3MJ62 389 aa33.82■■■■□ 3.01
SDCCAG3-202ENST00000357365 CDC37L1Q7L3B6 337 aa33.82■■■■□ 3.01
SDCCAG3-202ENST00000357365 MAGEB6Q8N7X4 407 aa33.82■■■■□ 3
SDCCAG3-202ENST00000357365 GRPEL1Q9HAV7 217 aa33.82■■■■□ 3
SDCCAG3-202ENST00000357365 TMEM63CQ9P1W3 806 aa33.82■■■■□ 3
SDCCAG3-202ENST00000357365 COL24A1Q17RW2 1714 aa33.82■■■■□ 3
SDCCAG3-202ENST00000357365 C4BP0C0L5 1744 aa33.81■■■■□ 3
SDCCAG3-202ENST00000357365 C4AP0C0L4 1744 aa33.81■■■■□ 3
SDCCAG3-202ENST00000357365 AGXT2Q9BYV1 514 aa33.81■■■■□ 3
SDCCAG3-202ENST00000357365 GYG1P46976 350 aa33.8■■■■□ 3
SDCCAG3-202ENST00000357365 FAM196AQ6ZSG2 479 aa33.8■■■■□ 3
SDCCAG3-202ENST00000357365 FERMT3Q86UX7 667 aa33.8■■■■□ 3
SDCCAG3-202ENST00000357365 BSDC1Q9NW68 430 aaPredicted RBP33.8■■■■□ 3
SDCCAG3-202ENST00000357365 DENND2AQ9ULE3 1009 aa33.8■■■■□ 3
SDCCAG3-202ENST00000357365 MINPP1Q9UNW1 487 aa33.8■■■■□ 3
SDCCAG3-202ENST00000357365 NBPF3Q9H094 633 aa33.8■■■■□ 3
SDCCAG3-202ENST00000357365 RGL2O15211 777 aa33.79■■■■□ 3
SDCCAG3-202ENST00000357365 TPRNQ4KMQ1 711 aa33.79■■■■□ 3
SDCCAG3-202ENST00000357365 DNM1Q05193 864 aaKnown RBP33.79■■■■□ 3
SDCCAG3-202ENST00000357365 NKX2-3Q8TAU0 364 aa33.79■■■■□ 3
SDCCAG3-202ENST00000357365 QTRT2Q9H974 415 aaKnown RBP33.79■■■■□ 3
SDCCAG3-202ENST00000357365 APPP05067 770 aa33.78■■■■□ 3
SDCCAG3-202ENST00000357365 DDX11Q96FC9 970 aa33.78■■■■□ 3
SDCCAG3-202ENST00000357365 NYXQ9GZU5 481 aa33.78■■■■□ 3
SDCCAG3-202ENST00000357365 ZNF213O14771 459 aa33.78■■■■□ 3
SDCCAG3-202ENST00000357365 MRE11P49959 708 aa33.78■■■■□ 3
SDCCAG3-202ENST00000357365 CCT2P78371 535 aaKnown RBP33.78■■■■□ 3
SDCCAG3-202ENST00000357365 PFKFB2O60825 505 aa33.77■■■■□ 3
SDCCAG3-202ENST00000357365 STRBPQ96SI9 672 aaKnown RBP33.77■■■■□ 3
SDCCAG3-202ENST00000357365 NAP1L2Q9ULW6 460 aaPredicted RBP33.77■■■■□ 3
SDCCAG3-202ENST00000357365 FIBPO43427 364 aa33.76■■■■□ 3
SDCCAG3-202ENST00000357365 MAP3K12Q12852 859 aa33.76■■■■□ 3
SDCCAG3-202ENST00000357365 FAM173BQ6P4H8 233 aa33.76■■■■□ 3
SDCCAG3-202ENST00000357365 AIDAQ96BJ3 306 aa33.76■■■■□ 3
SDCCAG3-202ENST00000357365 NLRP3Q96P20 1036 aa33.76■■■■□ 3
SDCCAG3-202ENST00000357365 NCOA5Q9HCD5 579 aaKnown RBP33.76■■■■□ 3
SDCCAG3-202ENST00000357365 PPFIA3O75145 1194 aa33.76■■■□□ 2.99
SDCCAG3-202ENST00000357365 RFC4P35249 363 aa33.76■■■□□ 2.99
SDCCAG3-202ENST00000357365 TRAPPC3LQ5T215 181 aa33.75■■■□□ 2.99
SDCCAG3-202ENST00000357365 MB21D2Q8IYB1 491 aaPredicted RBP33.75■■■□□ 2.99
SDCCAG3-202ENST00000357365 MBD4O95243 580 aa33.74■■■□□ 2.99
SDCCAG3-202ENST00000357365 CTDNEP1O95476 244 aa33.74■■■□□ 2.99
SDCCAG3-202ENST00000357365 TPTE2Q6XPS3 522 aa33.74■■■□□ 2.99
SDCCAG3-202ENST00000357365 TBC1D10CQ8IV04 446 aa33.74■■■□□ 2.99
SDCCAG3-202ENST00000357365 BCL11BQ9C0K0 894 aaPredicted RBP33.74■■■□□ 2.99
SDCCAG3-202ENST00000357365 ARMT1Q9H993 441 aa33.74■■■□□ 2.99
SDCCAG3-202ENST00000357365 MBD3O95983 291 aa33.74■■■□□ 2.99
SDCCAG3-202ENST00000357365 KLRK1P26718 216 aa33.74■■■□□ 2.99
SDCCAG3-202ENST00000357365 ANTXR2P58335 489 aa33.74■■■□□ 2.99
SDCCAG3-202ENST00000357365 TMEM87AQ8NBN3 555 aa33.74■■■□□ 2.99
SDCCAG3-202ENST00000357365 ZNF445P59923 1031 aa33.73■■■□□ 2.99
SDCCAG3-202ENST00000357365 SLC51AQ86UW1 340 aa33.73■■■□□ 2.99
SDCCAG3-202ENST00000357365 ATP6V1DQ9Y5K8 247 aa33.73■■■□□ 2.99
SDCCAG3-202ENST00000357365 COL1A1P02452 1464 aaPredicted RBP33.73■■■□□ 2.99
SDCCAG3-202ENST00000357365 PDCP20941 246 aa33.73■■■□□ 2.99
SDCCAG3-202ENST00000357365 PDIA3P30101 505 aaKnown RBP33.73■■■□□ 2.99
SDCCAG3-202ENST00000357365 ZNF804BA4D1E1 1349 aa33.72■■■□□ 2.99
SDCCAG3-202ENST00000357365 PRC1O43663 620 aa33.72■■■□□ 2.99
SDCCAG3-202ENST00000357365 RPS8P62241 208 aaKnown RBP33.72■■■□□ 2.99
SDCCAG3-202ENST00000357365 NSUN7Q8NE18 718 aaKnown RBP33.72■■■□□ 2.99
SDCCAG3-202ENST00000357365 EPB41L4AQ9HCS5 686 aaPredicted RBP33.72■■■□□ 2.99
SDCCAG3-202ENST00000357365 ISY1Q9ULR0 285 aaKnown RBP33.72■■■□□ 2.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms