RNA–Protein interactions for RNA: ENST00000356805.8

SPTBN1-202, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTBN1, Length 8,482 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-202ENST00000356805 ZNF500O60304 480 aaPredicted RBP12.95□□□□□ -0.34
SPTBN1-202ENST00000356805 GABPAQ06546 454 aa12.95□□□□□ -0.34
SPTBN1-202ENST00000356805 C8orf34Q49A92 452 aa12.95□□□□□ -0.34
SPTBN1-202ENST00000356805 LDHCP07864 332 aa12.95□□□□□ -0.34
SPTBN1-202ENST00000356805 FLIIQ13045 1269 aa12.95□□□□□ -0.34
SPTBN1-202ENST00000356805 NUDT16Q96DE0 195 aaKnown RBP12.95□□□□□ -0.34
SPTBN1-202ENST00000356805 ASIC1P78348 528 aa12.94□□□□□ -0.34
SPTBN1-202ENST00000356805 IRX5P78411 483 aaPredicted RBP12.94□□□□□ -0.34
SPTBN1-202ENST00000356805 PPFIA1Q13136 1202 aa12.94□□□□□ -0.34
SPTBN1-202ENST00000356805 WWC3Q9ULE0 1092 aa12.94□□□□□ -0.34
SPTBN1-202ENST00000356805 C9orf84Q5VXU9 1444 aa12.94□□□□□ -0.34
SPTBN1-202ENST00000356805 CFTRP13569 1480 aa12.94□□□□□ -0.34
SPTBN1-202ENST00000356805 TRIM27P14373 513 aa12.94□□□□□ -0.34
SPTBN1-202ENST00000356805 GBP1P32455 592 aa12.94□□□□□ -0.34
SPTBN1-202ENST00000356805 F13A1P00488 732 aa12.94□□□□□ -0.34
SPTBN1-202ENST00000356805 TNNC1P63316 161 aa12.94□□□□□ -0.34
SPTBN1-202ENST00000356805 SP4Q02446 784 aa12.94□□□□□ -0.34
SPTBN1-202ENST00000356805 SMARCC2Q8TAQ2 1214 aa12.94□□□□□ -0.34
SPTBN1-202ENST00000356805 VPS52Q8N1B4 723 aa12.94□□□□□ -0.34
SPTBN1-202ENST00000356805 KIAA1524Q8TCG1 905 aa12.94□□□□□ -0.34
SPTBN1-202ENST00000356805 NDUFAB1O14561 156 aa12.94□□□□□ -0.34
SPTBN1-202ENST00000356805 KRT5P13647 590 aa12.94□□□□□ -0.34
SPTBN1-202ENST00000356805 PPP1R21Q6ZMI0 780 aa12.94□□□□□ -0.34
SPTBN1-202ENST00000356805 PRPF31Q8WWY3 499 aaKnown RBP12.94□□□□□ -0.34
SPTBN1-202ENST00000356805 ZMYM3Q14202 1370 aa12.94□□□□□ -0.34
SPTBN1-202ENST00000356805 NAIPQ13075 1403 aa12.94□□□□□ -0.34
SPTBN1-202ENST00000356805 NAPAP54920 295 aa12.94□□□□□ -0.34
SPTBN1-202ENST00000356805 PPP2R5CQ13362 524 aa12.94□□□□□ -0.34
SPTBN1-202ENST00000356805 RPGRIP1Q96KN7 1286 aa12.94□□□□□ -0.34
SPTBN1-202ENST00000356805 NBPF7P0C2Y1 421 aaPredicted RBP12.94□□□□□ -0.34
SPTBN1-202ENST00000356805 PPP2R3AQ06190 1150 aa12.94□□□□□ -0.34
SPTBN1-202ENST00000356805 PPP1R42Q7Z4L9 355 aa12.94□□□□□ -0.34
SPTBN1-202ENST00000356805 UBLCP1Q8WVY7 318 aaPredicted RBP12.94□□□□□ -0.34
SPTBN1-202ENST00000356805 ATP6V0A2Q9Y487 856 aa12.94□□□□□ -0.34
SPTBN1-202ENST00000356805 FGD5Q6ZNL6 1462 aa12.93□□□□□ -0.34
SPTBN1-202ENST00000356805 E7EVH7 732 aa12.93□□□□□ -0.34
SPTBN1-202ENST00000356805 AMOTQ4VCS5 1084 aa12.93□□□□□ -0.34
SPTBN1-202ENST00000356805 KIFC2Q96AC6 838 aa12.93□□□□□ -0.34
SPTBN1-202ENST00000356805 SPDYE3A6NKU9 549 aa12.93□□□□□ -0.34
SPTBN1-202ENST00000356805 MARCKSP29966 332 aaPredicted RBP12.93□□□□□ -0.34
SPTBN1-202ENST00000356805 VCX3BQ9H321 246 aa12.93□□□□□ -0.34
SPTBN1-202ENST00000356805 BIN2Q9UBW5 565 aaPredicted RBP12.93□□□□□ -0.34
SPTBN1-202ENST00000356805 MTRF1LQ9UGC7 380 aaKnown RBP12.93□□□□□ -0.34
SPTBN1-202ENST00000356805 EVCP57679 992 aa12.93□□□□□ -0.34
SPTBN1-202ENST00000356805 CEP120Q8N960 986 aa12.93□□□□□ -0.34
SPTBN1-202ENST00000356805 STMN2Q93045 179 aa12.93□□□□□ -0.34
SPTBN1-202ENST00000356805 LRRC2Q9BYS8 371 aa12.93□□□□□ -0.34
SPTBN1-202ENST00000356805 ATAD2BQ9ULI0 1458 aa12.93□□□□□ -0.34
SPTBN1-202ENST00000356805 CUL4BQ13620 913 aa12.93□□□□□ -0.34
SPTBN1-202ENST00000356805 TRIM14Q14142 442 aa12.93□□□□□ -0.34
SPTBN1-202ENST00000356805 NBPF6Q5VWK0 638 aa12.93□□□□□ -0.34
SPTBN1-202ENST00000356805 NBPF5PQ86XG9 351 aaPredicted RBP12.93□□□□□ -0.34
SPTBN1-202ENST00000356805 NBPF4Q96M43 638 aa12.93□□□□□ -0.34
SPTBN1-202ENST00000356805 VEZTQ9HBM0 779 aa12.93□□□□□ -0.34
SPTBN1-202ENST00000356805 C6orf50Q9HD87 102 aa12.93□□□□□ -0.34
SPTBN1-202ENST00000356805 ALG1Q9BT22 464 aa12.92□□□□□ -0.34
SPTBN1-202ENST00000356805 ECHDC1Q9NTX5 307 aa12.92□□□□□ -0.34
SPTBN1-202ENST00000356805 UBXN1Q04323 297 aa12.92□□□□□ -0.34
SPTBN1-202ENST00000356805 RTN1Q16799 776 aa12.92□□□□□ -0.34
SPTBN1-202ENST00000356805 RRAGDQ9NQL2 400 aaPredicted RBP12.92□□□□□ -0.34
SPTBN1-202ENST00000356805 KRT9P35527 623 aa12.92□□□□□ -0.34
SPTBN1-202ENST00000356805 OGFOD1Q8N543 542 aa12.92□□□□□ -0.34
SPTBN1-202ENST00000356805 RNF34Q969K3 372 aa12.92□□□□□ -0.34
SPTBN1-202ENST00000356805 HSPA1LP34931 641 aa12.92□□□□□ -0.34
SPTBN1-202ENST00000356805 MSANTD4Q8NCY6 345 aa12.92□□□□□ -0.34
SPTBN1-202ENST00000356805 TBC1D31Q96DN5 1066 aa12.92□□□□□ -0.34
SPTBN1-202ENST00000356805 MRRFQ96E11 262 aaKnown RBP12.92□□□□□ -0.34
SPTBN1-202ENST00000356805 SLC4A4Q9Y6R1 1079 aa12.92□□□□□ -0.34
SPTBN1-202ENST00000356805 EXOC5O00471 708 aa12.92□□□□□ -0.34
SPTBN1-202ENST00000356805 CIB2O75838 187 aa12.92□□□□□ -0.34
SPTBN1-202ENST00000356805 SLC8A1P32418 973 aa12.92□□□□□ -0.34
SPTBN1-202ENST00000356805 BIRC2Q13490 618 aa12.92□□□□□ -0.34
SPTBN1-202ENST00000356805 CEP85LQ5SZL2 805 aa12.92□□□□□ -0.34
SPTBN1-202ENST00000356805 RUFY4Q6ZNE9 571 aa12.92□□□□□ -0.34
SPTBN1-202ENST00000356805 UBE3BQ7Z3V4 1068 aa12.92□□□□□ -0.34
SPTBN1-202ENST00000356805 IQSEC3Q9UPP2 1182 aaPredicted RBP12.92□□□□□ -0.34
SPTBN1-202ENST00000356805 HMGB1P1B2RPK0 211 aaPredicted RBP12.91□□□□□ -0.34
SPTBN1-202ENST00000356805 DCAF17Q5H9S7 520 aaPredicted RBP12.91□□□□□ -0.34
SPTBN1-202ENST00000356805 ARHGAP24Q8N264 748 aa12.91□□□□□ -0.34
SPTBN1-202ENST00000356805 KRT23Q9C075 422 aa12.91□□□□□ -0.34
SPTBN1-202ENST00000356805 DACT1Q9NYF0 836 aa12.91□□□□□ -0.34
SPTBN1-202ENST00000356805 NEK11Q8NG66 645 aa12.91□□□□□ -0.34
SPTBN1-202ENST00000356805 HDAC9Q9UKV0 1011 aa12.91□□□□□ -0.34
SPTBN1-202ENST00000356805 TTF2Q9UNY4 1162 aaKnown RBP12.91□□□□□ -0.34
SPTBN1-202ENST00000356805 TLDC2A0PJX2 215 aa12.91□□□□□ -0.34
SPTBN1-202ENST00000356805 ZBTB43O43298 467 aa12.91□□□□□ -0.34
SPTBN1-202ENST00000356805 CCDC170Q8IYT3 715 aa12.91□□□□□ -0.34
SPTBN1-202ENST00000356805 CYP7A1P22680 504 aa12.91□□□□□ -0.34
SPTBN1-202ENST00000356805 WHAMMP3Q1A5X7 153 aa12.91□□□□□ -0.34
SPTBN1-202ENST00000356805 RBM26Q5T8P6 1007 aaKnown RBP12.91□□□□□ -0.34
SPTBN1-202ENST00000356805 SYNJ2O15056 1496 aa12.91□□□□□ -0.34
SPTBN1-202ENST00000356805 KLF18A0A0U1RQI7 1052 aa12.91□□□□□ -0.34
SPTBN1-202ENST00000356805 DMTNQ08495 405 aa12.91□□□□□ -0.34
SPTBN1-202ENST00000356805 CCDC152Q4G0S7 254 aa12.91□□□□□ -0.34
SPTBN1-202ENST00000356805 RSPH3Q86UC2 560 aa12.91□□□□□ -0.34
SPTBN1-202ENST00000356805 NECAB1Q8N987 351 aa12.91□□□□□ -0.34
SPTBN1-202ENST00000356805 PSMA7O14818 248 aa12.91□□□□□ -0.34
SPTBN1-202ENST00000356805 LUC7L3O95232 432 aaKnown RBP12.91□□□□□ -0.34
SPTBN1-202ENST00000356805 RFX1P22670 979 aa12.91□□□□□ -0.34
SPTBN1-202ENST00000356805 PCK1P35558 622 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms