RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 EXOSC10Q01780 885 aaKnown RBP11.77□□□□□ -0.53
PTPRA-203ENST00000356147 NCAPHQ15003 741 aa11.77□□□□□ -0.53
PTPRA-203ENST00000356147 CFAP100Q494V2 611 aa11.77□□□□□ -0.53
PTPRA-203ENST00000356147 SPECC1Q5M775 1068 aa11.77□□□□□ -0.53
PTPRA-203ENST00000356147 UBXN4Q92575 508 aa11.77□□□□□ -0.53
PTPRA-203ENST00000356147 CCDC34Q96HJ3 373 aa11.77□□□□□ -0.53
PTPRA-203ENST00000356147 OSBPL5Q9H0X9 879 aaPredicted RBP11.77□□□□□ -0.53
PTPRA-203ENST00000356147 COPRSQ9NQ92 184 aa11.77□□□□□ -0.53
PTPRA-203ENST00000356147 PAG1Q9NWQ8 432 aa11.77□□□□□ -0.53
PTPRA-203ENST00000356147 JCADQ9P266 1359 aa11.77□□□□□ -0.53
PTPRA-203ENST00000356147 M0R2C6 588 aa11.76□□□□□ -0.53
PTPRA-203ENST00000356147 SPTLC2O15270 562 aa11.76□□□□□ -0.53
PTPRA-203ENST00000356147 H2AFXP16104 143 aaPredicted RBP11.76□□□□□ -0.53
PTPRA-203ENST00000356147 GNL2Q13823 731 aaKnown RBP11.76□□□□□ -0.53
PTPRA-203ENST00000356147 ADALQ6DHV7 355 aa11.76□□□□□ -0.53
PTPRA-203ENST00000356147 ZNF790Q6PG37 636 aa11.76□□□□□ -0.53
PTPRA-203ENST00000356147 MNS1Q8NEH6 495 aa11.76□□□□□ -0.53
PTPRA-203ENST00000356147 LLPHQ9BRT6 129 aaKnown RBP11.76□□□□□ -0.53
PTPRA-203ENST00000356147 METTL22Q9BUU2 404 aaPredicted RBP11.76□□□□□ -0.53
PTPRA-203ENST00000356147 ORC3Q9UBD5 711 aaPredicted RBP11.76□□□□□ -0.53
PTPRA-203ENST00000356147 UTYO14607 1347 aa11.76□□□□□ -0.53
PTPRA-203ENST00000356147 RGPD2P0DJD1 1756 aa11.76□□□□□ -0.53
PTPRA-203ENST00000356147 KLF18A0A0U1RQI7 1052 aa11.76□□□□□ -0.53
PTPRA-203ENST00000356147 GOLGA8BA8MQT2 603 aa11.76□□□□□ -0.53
PTPRA-203ENST00000356147 WDHD1O75717 1129 aaPredicted RBP11.76□□□□□ -0.53
PTPRA-203ENST00000356147 WASHC4Q2M389 1173 aa11.76□□□□□ -0.53
PTPRA-203ENST00000356147 LRRC24Q50LG9 513 aa11.76□□□□□ -0.53
PTPRA-203ENST00000356147 CHMP4AQ9BY43 222 aa11.76□□□□□ -0.53
PTPRA-203ENST00000356147 TBX22Q9Y458 520 aa11.76□□□□□ -0.53
PTPRA-203ENST00000356147 NEDD4P46934 1319 aa11.76□□□□□ -0.53
PTPRA-203ENST00000356147 CHD2O14647 1828 aaKnown RBP11.76□□□□□ -0.53
PTPRA-203ENST00000356147 MROH7-TTC4A0A0A0MT08 1334 aa11.75□□□□□ -0.53
PTPRA-203ENST00000356147 MAST3O60307 1309 aa11.75□□□□□ -0.53
PTPRA-203ENST00000356147 PFKFB1P16118 471 aa11.75□□□□□ -0.53
PTPRA-203ENST00000356147 PNOCQ13519 176 aa11.75□□□□□ -0.53
PTPRA-203ENST00000356147 BMS1Q14692 1282 aaKnown RBP11.75□□□□□ -0.53
PTPRA-203ENST00000356147 PDILTQ8N807 584 aa11.75□□□□□ -0.53
PTPRA-203ENST00000356147 CLIC6Q96NY7 704 aa11.75□□□□□ -0.53
PTPRA-203ENST00000356147 DNAJC5Q9H3Z4 198 aa11.75□□□□□ -0.53
PTPRA-203ENST00000356147 L2HGDHQ9H9P8 463 aa11.75□□□□□ -0.53
PTPRA-203ENST00000356147 UBR1Q8IWV7 1749 aa11.75□□□□□ -0.53
PTPRA-203ENST00000356147 UBE2Q2LH0YL09 131 aa11.75□□□□□ -0.53
PTPRA-203ENST00000356147 GCP02774 474 aa11.75□□□□□ -0.53
PTPRA-203ENST00000356147 SYNE3Q6ZMZ3 975 aa11.75□□□□□ -0.53
PTPRA-203ENST00000356147 NKX2-3Q8TAU0 364 aa11.75□□□□□ -0.53
PTPRA-203ENST00000356147 CDK11BP21127 795 aaKnown RBP11.75□□□□□ -0.53
PTPRA-203ENST00000356147 HNRNPH2P55795 449 aaKnown RBP11.75□□□□□ -0.53
PTPRA-203ENST00000356147 UBASH3AP57075 661 aa11.75□□□□□ -0.53
PTPRA-203ENST00000356147 ETF1P62495 437 aaKnown RBP11.75□□□□□ -0.53
PTPRA-203ENST00000356147 ST5P78524 1137 aa11.75□□□□□ -0.53
PTPRA-203ENST00000356147 MYSM1Q5VVJ2 828 aa11.75□□□□□ -0.53
PTPRA-203ENST00000356147 OSBP2Q969R2 916 aa11.75□□□□□ -0.53
PTPRA-203ENST00000356147 ORAI2Q96SN7 254 aa11.75□□□□□ -0.53
PTPRA-203ENST00000356147 FAM53CQ9NYF3 392 aa11.75□□□□□ -0.53
PTPRA-203ENST00000356147 RTEL1Q9NZ71 1219 aa11.75□□□□□ -0.53
PTPRA-203ENST00000356147 SALL1Q9NSC2 1324 aa11.74□□□□□ -0.53
PTPRA-203ENST00000356147 CCDC66A2RUB6 948 aa11.74□□□□□ -0.53
PTPRA-203ENST00000356147 CPLX1O14810 134 aa11.74□□□□□ -0.53
PTPRA-203ENST00000356147 AMOTQ4VCS5 1084 aa11.74□□□□□ -0.53
PTPRA-203ENST00000356147 CCDC93Q567U6 631 aa11.74□□□□□ -0.53
PTPRA-203ENST00000356147 TEX35Q5T0J7 233 aa11.74□□□□□ -0.53
PTPRA-203ENST00000356147 PI16Q6UXB8 463 aa11.74□□□□□ -0.53
PTPRA-203ENST00000356147 CCDC150Q8NCX0 1101 aa11.74□□□□□ -0.53
PTPRA-203ENST00000356147 TIGD1Q96MW7 591 aa11.74□□□□□ -0.53
PTPRA-203ENST00000356147 PUS3Q9BZE2 481 aaKnown RBP11.74□□□□□ -0.53
PTPRA-203ENST00000356147 FOXN1O15353 648 aa11.74□□□□□ -0.53
PTPRA-203ENST00000356147 TMCO3Q6UWJ1 677 aa11.74□□□□□ -0.53
PTPRA-203ENST00000356147 HSD3B7Q9H2F3 369 aa11.74□□□□□ -0.53
PTPRA-203ENST00000356147 IFIT1P09914 478 aaKnown RBP11.73□□□□□ -0.53
PTPRA-203ENST00000356147 NLRP12P59046 1061 aa11.73□□□□□ -0.53
PTPRA-203ENST00000356147 DESI2Q9BSY9 194 aa11.73□□□□□ -0.53
PTPRA-203ENST00000356147 FANCLQ9NW38 375 aa11.73□□□□□ -0.53
PTPRA-203ENST00000356147 NLRP2Q9NX02 1062 aa11.73□□□□□ -0.53
PTPRA-203ENST00000356147 HMGB1P09429 215 aaKnown RBP11.73□□□□□ -0.53
PTPRA-203ENST00000356147 EVCP57679 992 aa11.73□□□□□ -0.53
PTPRA-203ENST00000356147 TRIM65Q6PJ69 517 aa11.73□□□□□ -0.53
PTPRA-203ENST00000356147 PHKBQ93100 1093 aa11.73□□□□□ -0.53
PTPRA-203ENST00000356147 WDR24Q96S15 920 aa11.73□□□□□ -0.53
PTPRA-203ENST00000356147 IRX2Q9BZI1 471 aaPredicted RBP11.73□□□□□ -0.53
PTPRA-203ENST00000356147 IMPACTQ9P2X3 320 aa11.73□□□□□ -0.53
PTPRA-203ENST00000356147 ZNF330Q9Y3S2 320 aaPredicted RBP11.73□□□□□ -0.53
PTPRA-203ENST00000356147 PRC1O43663 620 aa11.73□□□□□ -0.53
PTPRA-203ENST00000356147 SASH3O75995 380 aa11.73□□□□□ -0.53
PTPRA-203ENST00000356147 KARSQ15046 597 aaKnown RBP11.73□□□□□ -0.53
PTPRA-203ENST00000356147 ZNF827Q17R98 1081 aa11.73□□□□□ -0.53
PTPRA-203ENST00000356147 KDM3BQ7LBC6 1761 aa11.73□□□□□ -0.53
PTPRA-203ENST00000356147 PALLDQ8WX93 1383 aa11.72□□□□□ -0.53
PTPRA-203ENST00000356147 KIF2AO00139 706 aaPredicted RBP11.72□□□□□ -0.53
PTPRA-203ENST00000356147 ADKP55263 362 aaKnown RBP11.72□□□□□ -0.53
PTPRA-203ENST00000356147 GNG11P61952 73 aa11.72□□□□□ -0.53
PTPRA-203ENST00000356147 TPM4P67936 248 aa11.72□□□□□ -0.53
PTPRA-203ENST00000356147 ZMYM1Q5SVZ6 1142 aa11.72□□□□□ -0.53
PTPRA-203ENST00000356147 ANO1Q5XXA6 986 aa11.72□□□□□ -0.53
PTPRA-203ENST00000356147 FBXO18Q8NFZ0 1043 aa11.72□□□□□ -0.53
PTPRA-203ENST00000356147 MED1Q15648 1581 aaPredicted RBP11.72□□□□□ -0.53
PTPRA-203ENST00000356147 PSDA5PKW4 1024 aaPredicted RBP11.72□□□□□ -0.53
PTPRA-203ENST00000356147 NRDCO43847 1150 aa11.72□□□□□ -0.53
PTPRA-203ENST00000356147 CAPN2P17655 700 aa11.72□□□□□ -0.53
PTPRA-203ENST00000356147 SYKP43405 635 aa11.72□□□□□ -0.53
PTPRA-203ENST00000356147 AXDND1Q5T1B0 1012 aaPredicted RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms