RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 RLBP1P12271 317 aa14.34□□□□□ -0.11
SYNCRIP-201ENST00000355238 PI4KAP1Q8N8J0 262 aa14.34□□□□□ -0.11
SYNCRIP-201ENST00000355238 ERMNQ8TAM6 284 aa14.34□□□□□ -0.11
SYNCRIP-201ENST00000355238 GOLGA5Q8TBA6 731 aa14.34□□□□□ -0.11
SYNCRIP-201ENST00000355238 PPP1R2P41236 205 aa14.34□□□□□ -0.11
SYNCRIP-201ENST00000355238 STX17P56962 302 aa14.34□□□□□ -0.11
SYNCRIP-201ENST00000355238 USP37Q86T82 979 aa14.34□□□□□ -0.11
SYNCRIP-201ENST00000355238 MTUS1Q9ULD2 1270 aa14.34□□□□□ -0.11
SYNCRIP-201ENST00000355238 NMIQ13287 307 aaPredicted RBP14.34□□□□□ -0.11
SYNCRIP-201ENST00000355238 NEDD9Q14511 834 aa14.33□□□□□ -0.11
SYNCRIP-201ENST00000355238 CEP85Q6P2H3 762 aa14.33□□□□□ -0.11
SYNCRIP-201ENST00000355238 CCDC174Q6PII3 467 aa14.33□□□□□ -0.11
SYNCRIP-201ENST00000355238 CEP128Q6ZU80 1094 aa14.33□□□□□ -0.11
SYNCRIP-201ENST00000355238 SH3BGRP55822 239 aaPredicted RBP14.33□□□□□ -0.12
SYNCRIP-201ENST00000355238 NME9Q86XW9 330 aa14.33□□□□□ -0.12
SYNCRIP-201ENST00000355238 VCX3BQ9H321 246 aa14.33□□□□□ -0.12
SYNCRIP-201ENST00000355238 TSPY2A6NKD2 308 aa14.33□□□□□ -0.12
SYNCRIP-201ENST00000355238 CCDC38Q502W7 563 aa14.33□□□□□ -0.12
SYNCRIP-201ENST00000355238 POLR3AO14802 1390 aaPredicted RBP14.33□□□□□ -0.12
SYNCRIP-201ENST00000355238 PPFIA4O75335 1185 aa14.33□□□□□ -0.12
SYNCRIP-201ENST00000355238 UQCRFS1P1P0C7P4 283 aa14.33□□□□□ -0.12
SYNCRIP-201ENST00000355238 GSTA5Q7RTV2 222 aa14.33□□□□□ -0.12
SYNCRIP-201ENST00000355238 BANK1Q8NDB2 785 aa14.33□□□□□ -0.12
SYNCRIP-201ENST00000355238 RPGRIP1Q96KN7 1286 aa14.33□□□□□ -0.12
SYNCRIP-201ENST00000355238 DDX23Q9BUQ8 820 aaKnown RBP14.33□□□□□ -0.12
SYNCRIP-201ENST00000355238 MAPKBP1O60336 1514 aa14.32□□□□□ -0.12
SYNCRIP-201ENST00000355238 FAM135AQ9P2D6 1515 aa14.32□□□□□ -0.12
SYNCRIP-201ENST00000355238 DHX32Q7L7V1 743 aaKnown RBP14.32□□□□□ -0.12
SYNCRIP-201ENST00000355238 ZBTB9Q96C00 473 aa14.32□□□□□ -0.12
SYNCRIP-201ENST00000355238 ATP2A2P16615 1042 aaKnown RBP14.32□□□□□ -0.12
SYNCRIP-201ENST00000355238 TMTC1Q8IUR5 882 aa14.32□□□□□ -0.12
SYNCRIP-201ENST00000355238 IQUBQ8NA54 791 aa14.32□□□□□ -0.12
SYNCRIP-201ENST00000355238 PPP1R12CQ9BZL4 782 aa14.32□□□□□ -0.12
SYNCRIP-201ENST00000355238 A0A1B0GVL5 298 aa14.32□□□□□ -0.12
SYNCRIP-201ENST00000355238 GNAQP50148 359 aa14.32□□□□□ -0.12
SYNCRIP-201ENST00000355238 FYB2Q5VWT5 728 aa14.32□□□□□ -0.12
SYNCRIP-201ENST00000355238 ESR2Q92731 530 aa14.32□□□□□ -0.12
SYNCRIP-201ENST00000355238 PAK2Q13177 524 aa14.31□□□□□ -0.12
SYNCRIP-201ENST00000355238 CEP85LQ5SZL2 805 aa14.31□□□□□ -0.12
SYNCRIP-201ENST00000355238 CWC25Q9NXE8 425 aaPredicted RBP14.31□□□□□ -0.12
SYNCRIP-201ENST00000355238 ALDH1L1O75891 902 aa14.31□□□□□ -0.12
SYNCRIP-201ENST00000355238 PPP1R7Q15435 360 aa14.31□□□□□ -0.12
SYNCRIP-201ENST00000355238 CRACR2BQ8N4Y2 399 aaPredicted RBP14.31□□□□□ -0.12
SYNCRIP-201ENST00000355238 ACTN4O43707 911 aaKnown RBP14.31□□□□□ -0.12
SYNCRIP-201ENST00000355238 MAP7D1Q3KQU3 841 aa14.31□□□□□ -0.12
SYNCRIP-201ENST00000355238 SNRKQ9NRH2 765 aa14.31□□□□□ -0.12
SYNCRIP-201ENST00000355238 PNMA8AQ86V59 439 aaPredicted RBP14.31□□□□□ -0.12
SYNCRIP-201ENST00000355238 SLF2Q8IX21 1173 aa14.31□□□□□ -0.12
SYNCRIP-201ENST00000355238 ZNF652Q9Y2D9 606 aa14.31□□□□□ -0.12
SYNCRIP-201ENST00000355238 CCDC97Q96F63 343 aaPredicted RBP14.31□□□□□ -0.12
SYNCRIP-201ENST00000355238 CALML3P27482 149 aa14.3□□□□□ -0.12
SYNCRIP-201ENST00000355238 ARID5AQ03989 594 aa14.3□□□□□ -0.12
SYNCRIP-201ENST00000355238 TAOK1Q7L7X3 1001 aa14.3□□□□□ -0.12
SYNCRIP-201ENST00000355238 CCDC25Q86WR0 208 aa14.3□□□□□ -0.12
SYNCRIP-201ENST00000355238 CCDC63Q8NA47 563 aa14.3□□□□□ -0.12
SYNCRIP-201ENST00000355238 LLPHQ9BRT6 129 aaKnown RBP14.3□□□□□ -0.12
SYNCRIP-201ENST00000355238 ARHGAP24Q8N264 748 aa14.3□□□□□ -0.12
SYNCRIP-201ENST00000355238 TMEM63CQ9P1W3 806 aa14.3□□□□□ -0.12
SYNCRIP-201ENST00000355238 RNF123Q5XPI4 1314 aa14.3□□□□□ -0.12
SYNCRIP-201ENST00000355238 GCKP35557 465 aa14.3□□□□□ -0.12
SYNCRIP-201ENST00000355238 NLRP12P59046 1061 aa14.3□□□□□ -0.12
SYNCRIP-201ENST00000355238 EFCAB8A8MWE9 144 aa14.3□□□□□ -0.12
SYNCRIP-201ENST00000355238 SLC8A1P32418 973 aa14.3□□□□□ -0.12
SYNCRIP-201ENST00000355238 MTMR3Q13615 1198 aa14.3□□□□□ -0.12
SYNCRIP-201ENST00000355238 IFIT1BQ5T764 474 aaKnown RBP14.3□□□□□ -0.12
SYNCRIP-201ENST00000355238 KRT2P35908 639 aa14.29□□□□□ -0.12
SYNCRIP-201ENST00000355238 APOBRQ0VD83 1088 aa14.29□□□□□ -0.12
SYNCRIP-201ENST00000355238 MLKLQ8NB16 471 aa14.29□□□□□ -0.12
SYNCRIP-201ENST00000355238 LRCH2Q5VUJ6 765 aa14.29□□□□□ -0.12
SYNCRIP-201ENST00000355238 TMOD2Q9NZR1 351 aa14.29□□□□□ -0.12
SYNCRIP-201ENST00000355238 UTP11Q9Y3A2 253 aaKnown RBP14.29□□□□□ -0.12
SYNCRIP-201ENST00000355238 CAPN7Q9Y6W3 813 aa14.29□□□□□ -0.12
SYNCRIP-201ENST00000355238 FAM83GA6ND36 823 aa14.29□□□□□ -0.12
SYNCRIP-201ENST00000355238 ATP8B1O43520 1251 aa14.29□□□□□ -0.12
SYNCRIP-201ENST00000355238 CALM1P0DP23 149 aa14.29□□□□□ -0.12
SYNCRIP-201ENST00000355238 CALM2P0DP24 149 aa14.29□□□□□ -0.12
SYNCRIP-201ENST00000355238 CALM3P0DP25 149 aa14.29□□□□□ -0.12
SYNCRIP-201ENST00000355238 VWA3BQ502W6 1294 aa14.29□□□□□ -0.12
SYNCRIP-201ENST00000355238 SEL1L2Q5TEA6 688 aa14.29□□□□□ -0.12
SYNCRIP-201ENST00000355238 APBB1IPQ7Z5R6 666 aaPredicted RBP14.29□□□□□ -0.12
SYNCRIP-201ENST00000355238 NUP58Q9BVL2 599 aa14.29□□□□□ -0.12
SYNCRIP-201ENST00000355238 PIK3C2GO75747 1445 aa14.29□□□□□ -0.12
SYNCRIP-201ENST00000355238 ZMYM3Q14202 1370 aa14.29□□□□□ -0.12
SYNCRIP-201ENST00000355238 SECISBP2LQ93073 1101 aaKnown RBP14.29□□□□□ -0.12
SYNCRIP-201ENST00000355238 TSKSQ9UJT2 592 aa14.29□□□□□ -0.12
SYNCRIP-201ENST00000355238 FAM184BQ9ULE4 1060 aa14.29□□□□□ -0.12
SYNCRIP-201ENST00000355238 AP1ARQ63HQ0 302 aa14.29□□□□□ -0.12
SYNCRIP-201ENST00000355238 TNNQ9UQP3 1299 aa14.29□□□□□ -0.12
SYNCRIP-201ENST00000355238 WHAMMP3Q1A5X7 153 aa14.28□□□□□ -0.12
SYNCRIP-201ENST00000355238 LDHAL6AQ6ZMR3 332 aa14.28□□□□□ -0.12
SYNCRIP-201ENST00000355238 MED4Q9NPJ6 270 aa14.28□□□□□ -0.12
SYNCRIP-201ENST00000355238 ZRANB1Q9UGI0 708 aa14.28□□□□□ -0.12
SYNCRIP-201ENST00000355238 ATP6V0A2Q9Y487 856 aa14.28□□□□□ -0.12
SYNCRIP-201ENST00000355238 UBE3BQ7Z3V4 1068 aa14.28□□□□□ -0.12
SYNCRIP-201ENST00000355238 PHLDB2Q86SQ0 1253 aa14.28□□□□□ -0.12
SYNCRIP-201ENST00000355238 RNF10Q8N5U6 811 aaKnown RBP14.28□□□□□ -0.12
SYNCRIP-201ENST00000355238 RTL9Q8NET4 1388 aa14.28□□□□□ -0.12
SYNCRIP-201ENST00000355238 VSIG1Q86XK7 387 aa14.28□□□□□ -0.12
SYNCRIP-201ENST00000355238 CEP120Q8N960 986 aa14.28□□□□□ -0.12
SYNCRIP-201ENST00000355238 PLCB1Q9NQ66 1216 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms