RNA–Protein interactions for RNA: ENST00000354880.9

CTSA-202, Transcript of cathepsin A, humanhuman

TSL 2 BASIC

Gene CTSA, Length 1,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-202ENST00000354880 DLEC1Q9Y238 1755 aa18.79■□□□□ 0.6
CTSA-202ENST00000354880 COL1A1P02452 1464 aaPredicted RBP18.79■□□□□ 0.6
CTSA-202ENST00000354880 DOCK2Q92608 1830 aa18.79■□□□□ 0.6
CTSA-202ENST00000354880 DPP8Q6V1X1 898 aaPredicted RBP18.79■□□□□ 0.6
CTSA-202ENST00000354880 WASHC4Q2M389 1173 aa18.78■□□□□ 0.6
CTSA-202ENST00000354880 SLFNL1Q499Z3 407 aa18.78■□□□□ 0.6
CTSA-202ENST00000354880 SLC9C2Q5TAH2 1124 aa18.78■□□□□ 0.6
CTSA-202ENST00000354880 ZNF589Q86UQ0 364 aaPredicted RBP18.78■□□□□ 0.6
CTSA-202ENST00000354880 SEC62Q99442 399 aaKnown RBP18.78■□□□□ 0.6
CTSA-202ENST00000354880 MCCP23508 829 aa18.77■□□□□ 0.6
CTSA-202ENST00000354880 MAP3K12Q12852 859 aa18.77■□□□□ 0.6
CTSA-202ENST00000354880 CCDC171Q6TFL3 1326 aa18.77■□□□□ 0.6
CTSA-202ENST00000354880 ADD2P35612 726 aa18.77■□□□□ 0.59
CTSA-202ENST00000354880 APPBP2Q92624 585 aa18.77■□□□□ 0.59
CTSA-202ENST00000354880 SGIP1Q9BQI5 828 aa18.77■□□□□ 0.59
CTSA-202ENST00000354880 DUOX1Q9NRD9 1551 aa18.76■□□□□ 0.59
CTSA-202ENST00000354880 A0A0G2JLW4 131 aa18.76■□□□□ 0.59
CTSA-202ENST00000354880 DPEP1P16444 411 aa18.76■□□□□ 0.59
CTSA-202ENST00000354880 TGFB2P61812 414 aa18.76■□□□□ 0.59
CTSA-202ENST00000354880 PTH1RQ03431 593 aa18.76■□□□□ 0.59
CTSA-202ENST00000354880 UBE3CQ15386 1083 aa18.76■□□□□ 0.59
CTSA-202ENST00000354880 TTLL6Q8N841 843 aa18.76■□□□□ 0.59
CTSA-202ENST00000354880 TDRD7Q8NHU6 1098 aaKnown RBP18.76■□□□□ 0.59
CTSA-202ENST00000354880 C7orf43Q8WVR3 580 aa18.76■□□□□ 0.59
CTSA-202ENST00000354880 OSBP2Q969R2 916 aa18.76■□□□□ 0.59
CTSA-202ENST00000354880 LRP2BPQ9P2M1 347 aa18.76■□□□□ 0.59
CTSA-202ENST00000354880 WWC3Q9ULE0 1092 aa18.76■□□□□ 0.59
CTSA-202ENST00000354880 PDE6AP16499 860 aa18.75■□□□□ 0.59
CTSA-202ENST00000354880 KCNA3P22001 575 aa18.75■□□□□ 0.59
CTSA-202ENST00000354880 CCDC129Q6ZRS4 1044 aa18.75■□□□□ 0.59
CTSA-202ENST00000354880 ILDR2Q71H61 639 aa18.75■□□□□ 0.59
CTSA-202ENST00000354880 DDRGK1Q96HY6 314 aa18.75■□□□□ 0.59
CTSA-202ENST00000354880 KIF2CQ99661 725 aa18.75■□□□□ 0.59
CTSA-202ENST00000354880 CD209Q9NNX6 404 aa18.75■□□□□ 0.59
CTSA-202ENST00000354880 ABCF2Q9UG63 623 aa18.75■□□□□ 0.59
CTSA-202ENST00000354880 MAST3O60307 1309 aa18.75■□□□□ 0.59
CTSA-202ENST00000354880 CC2D2BQ6DHV5 1058 aa18.74■□□□□ 0.59
CTSA-202ENST00000354880 MAP4K1Q92918 833 aa18.74■□□□□ 0.59
CTSA-202ENST00000354880 ZNF219Q9P2Y4 722 aaPredicted RBP18.74■□□□□ 0.59
CTSA-202ENST00000354880 ZNF532Q9HCE3 1301 aa18.74■□□□□ 0.59
CTSA-202ENST00000354880 IL1R1P14778 569 aa18.74■□□□□ 0.59
CTSA-202ENST00000354880 HSPA4P34932 840 aa18.74■□□□□ 0.59
CTSA-202ENST00000354880 CHAF1AQ13111 956 aaPredicted RBP18.74■□□□□ 0.59
CTSA-202ENST00000354880 ZC3H12CQ9C0D7 883 aaKnown RBP18.74■□□□□ 0.59
CTSA-202ENST00000354880 TCRBV5S4A2TA0A5A2 114 aa18.73■□□□□ 0.59
CTSA-202ENST00000354880 M0R2C6 588 aa18.73■□□□□ 0.59
CTSA-202ENST00000354880 MAGEB6Q8N7X4 407 aa18.73■□□□□ 0.59
CTSA-202ENST00000354880 IPO9Q96P70 1041 aaKnown RBP18.73■□□□□ 0.59
CTSA-202ENST00000354880 EYA3Q99504 573 aa18.73■□□□□ 0.59
CTSA-202ENST00000354880 PUS7LQ9H0K6 701 aaKnown RBP18.73■□□□□ 0.59
CTSA-202ENST00000354880 RIMBP2O15034 1052 aa18.72■□□□□ 0.59
CTSA-202ENST00000354880 PTGER2P43116 358 aa18.72■□□□□ 0.59
CTSA-202ENST00000354880 ANAPC15P60006 121 aa18.72■□□□□ 0.59
CTSA-202ENST00000354880 WDR66Q8TBY9 1149 aa18.72■□□□□ 0.59
CTSA-202ENST00000354880 RAI14Q9P0K7 980 aa18.72■□□□□ 0.59
CTSA-202ENST00000354880 KIAA1551Q9HCM1 1747 aa18.72■□□□□ 0.59
CTSA-202ENST00000354880 C21orf2O43822 256 aa18.72■□□□□ 0.59
CTSA-202ENST00000354880 RTFDC1Q9BY42 306 aaPredicted RBP18.72■□□□□ 0.59
CTSA-202ENST00000354880 COA1Q9GZY4 146 aa18.72■□□□□ 0.59
CTSA-202ENST00000354880 PPP1R1BQ9UD71 204 aaPredicted RBP18.72■□□□□ 0.59
CTSA-202ENST00000354880 RBM8AQ9Y5S9 174 aaKnown RBP18.72■□□□□ 0.59
CTSA-202ENST00000354880 GRIPAP1Q4V328 841 aa18.71■□□□□ 0.59
CTSA-202ENST00000354880 ERICH6Q7L0X2 663 aa18.71■□□□□ 0.59
CTSA-202ENST00000354880 ZGPATQ8N5A5 531 aaKnown RBP18.71■□□□□ 0.59
CTSA-202ENST00000354880 PIM2Q9P1W9 311 aa18.71■□□□□ 0.59
CTSA-202ENST00000354880 PALD1Q9ULE6 856 aa18.71■□□□□ 0.59
CTSA-202ENST00000354880 CD2APQ9Y5K6 639 aa18.71■□□□□ 0.59
CTSA-202ENST00000354880 SALL1Q9NSC2 1324 aa18.71■□□□□ 0.59
CTSA-202ENST00000354880 SNED1Q8TER0 1413 aa18.71■□□□□ 0.59
CTSA-202ENST00000354880 NECTIN1Q15223 517 aa18.7■□□□□ 0.58
CTSA-202ENST00000354880 DSCC1Q9BVC3 393 aa18.7■□□□□ 0.58
CTSA-202ENST00000354880 JAG2Q9Y219 1238 aa18.7■□□□□ 0.58
CTSA-202ENST00000354880 GPAA1O43292 621 aa18.7■□□□□ 0.58
CTSA-202ENST00000354880 RABEP1Q15276 862 aa18.7■□□□□ 0.58
CTSA-202ENST00000354880 SPTY2D1Q68D10 685 aaPredicted RBP18.7■□□□□ 0.58
CTSA-202ENST00000354880 IL17RAQ96F46 866 aa18.7■□□□□ 0.58
CTSA-202ENST00000354880 HSPD1P10809 573 aaKnown RBP18.69■□□□□ 0.58
CTSA-202ENST00000354880 CCDC93Q567U6 631 aa18.69■□□□□ 0.58
CTSA-202ENST00000354880 VPS53Q5VIR6 699 aa18.69■□□□□ 0.58
CTSA-202ENST00000354880 IGSF3O75054 1194 aa18.68■□□□□ 0.58
CTSA-202ENST00000354880 PRDX5P30044 214 aa18.68■□□□□ 0.58
CTSA-202ENST00000354880 RTKN2Q8IZC4 609 aa18.68■□□□□ 0.58
CTSA-202ENST00000354880 KLHL34Q8N239 644 aa18.68■□□□□ 0.58
CTSA-202ENST00000354880 SUPT20HQ8NEM7 779 aa18.68■□□□□ 0.58
CTSA-202ENST00000354880 AIDAQ96BJ3 306 aa18.68■□□□□ 0.58
CTSA-202ENST00000354880 U3KPZ7 1027 aaPredicted RBP18.68■□□□□ 0.58
CTSA-202ENST00000354880 CCDC88AQ3V6T2 1871 aa18.67■□□□□ 0.58
CTSA-202ENST00000354880 G3V3G9 751 aa18.67■□□□□ 0.58
CTSA-202ENST00000354880 CYP7A1P22680 504 aa18.67■□□□□ 0.58
CTSA-202ENST00000354880 DCAF8Q5TAQ9 597 aa18.67■□□□□ 0.58
CTSA-202ENST00000354880 RNF20Q5VTR2 975 aa18.67■□□□□ 0.58
CTSA-202ENST00000354880 CREB3L3Q68CJ9 461 aa18.67■□□□□ 0.58
CTSA-202ENST00000354880 NAA16Q6N069 864 aaPredicted RBP18.67■□□□□ 0.58
CTSA-202ENST00000354880 TMED8Q6PL24 325 aaPredicted RBP18.67■□□□□ 0.58
CTSA-202ENST00000354880 NSUN4Q96CB9 384 aaKnown RBP18.67■□□□□ 0.58
CTSA-202ENST00000354880 SPON1Q9HCB6 807 aa18.67■□□□□ 0.58
CTSA-202ENST00000354880 SNX14Q9Y5W7 946 aa18.67■□□□□ 0.58
CTSA-202ENST00000354880 CHD4Q14839 1912 aa18.67■□□□□ 0.58
CTSA-202ENST00000354880 ZKSCAN1P17029 563 aaPredicted RBP18.67■□□□□ 0.58
CTSA-202ENST00000354880 MECOMQ03112 1051 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms