RNA–Protein interactions for RNA: ENST00000353411.10

SKP1-202, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SKP1, Length 9,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-202ENST00000353411 DENND4BO75064 1496 aaPredicted RBP5.68□□□□□ -1.5
SKP1-202ENST00000353411 ANKRD30BQ9BXX2 1392 aa5.68□□□□□ -1.5
SKP1-202ENST00000353411 MATR3P43243 847 aaKnown RBP eCLIP5.68□□□□□ -1.53e-8■■■■■ 28.7
SKP1-202ENST00000353411 TRIM14Q14142 442 aa5.68□□□□□ -1.5
SKP1-202ENST00000353411 CPLX3Q8WVH0 158 aa5.68□□□□□ -1.5
SKP1-202ENST00000353411 SMC6Q96SB8 1091 aa5.68□□□□□ -1.5
SKP1-202ENST00000353411 FAM169AQ9Y6X4 670 aa5.68□□□□□ -1.5
SKP1-202ENST00000353411 IL16Q14005 1332 aa5.68□□□□□ -1.5
SKP1-202ENST00000353411 FLOT1O75955 427 aa5.68□□□□□ -1.5
SKP1-202ENST00000353411 SDSP20132 328 aa5.68□□□□□ -1.5
SKP1-202ENST00000353411 TRIM68Q6AZZ1 485 aa5.68□□□□□ -1.5
SKP1-202ENST00000353411 ZNF692Q9BU19 519 aaPredicted RBP5.68□□□□□ -1.5
SKP1-202ENST00000353411 PHAXQ9H814 394 aaKnown RBP5.68□□□□□ -1.5
SKP1-202ENST00000353411 GPBP1L1Q9HC44 474 aaPredicted RBP5.68□□□□□ -1.5
SKP1-202ENST00000353411 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.68□□□□□ -1.54e-6■■■■■ 49.8
SKP1-202ENST00000353411 ETAA1Q9NY74 926 aa5.68□□□□□ -1.5
SKP1-202ENST00000353411 RASAL2Q9UJF2 1139 aa5.68□□□□□ -1.5
SKP1-202ENST00000353411 TNNC1P63316 161 aa5.68□□□□□ -1.5
SKP1-202ENST00000353411 FAM212AQ96EL1 285 aa5.68□□□□□ -1.5
SKP1-202ENST00000353411 KIF2CQ99661 725 aa5.68□□□□□ -1.5
SKP1-202ENST00000353411 TRAK1Q9UPV9 953 aa5.68□□□□□ -1.5
SKP1-202ENST00000353411 MICAL3Q7RTP6 2002 aa5.67□□□□□ -1.5
SKP1-202ENST00000353411 PHLDB3Q6NSJ2 640 aa5.67□□□□□ -1.5
SKP1-202ENST00000353411 PPP1R13BQ96KQ4 1090 aa5.67□□□□□ -1.5
SKP1-202ENST00000353411 MYL5Q02045 173 aa5.67□□□□□ -1.5
SKP1-202ENST00000353411 MTMR3Q13615 1198 aa5.67□□□□□ -1.5
SKP1-202ENST00000353411 UBE4AQ14139 1066 aa5.67□□□□□ -1.5
SKP1-202ENST00000353411 SRGAP1Q7Z6B7 1085 aa5.67□□□□□ -1.5
SKP1-202ENST00000353411 CCDC170Q8IYT3 715 aa5.67□□□□□ -1.5
SKP1-202ENST00000353411 ARHGAP18Q8N392 663 aa5.67□□□□□ -1.5
SKP1-202ENST00000353411 GFM2Q969S9 779 aaKnown RBP5.67□□□□□ -1.5
SKP1-202ENST00000353411 RALGAPBQ86X10 1494 aa5.67□□□□□ -1.5
SKP1-202ENST00000353411 BIN1O00499 593 aa5.67□□□□□ -1.5
SKP1-202ENST00000353411 LMOD1P29536 600 aaPredicted RBP5.67□□□□□ -1.5
SKP1-202ENST00000353411 LRMPQ12912 555 aa5.67□□□□□ -1.5
SKP1-202ENST00000353411 MIER3Q7Z3K6 550 aa5.67□□□□□ -1.5
SKP1-202ENST00000353411 C8orf76Q96K31 380 aa5.67□□□□□ -1.5
SKP1-202ENST00000353411 DNAJC5Q9H3Z4 198 aa5.67□□□□□ -1.5
SKP1-202ENST00000353411 PLCB1Q9NQ66 1216 aa5.67□□□□□ -1.5
SKP1-202ENST00000353411 HPDP32754 393 aaPredicted RBP5.67□□□□□ -1.5
SKP1-202ENST00000353411 SYKP43405 635 aa5.67□□□□□ -1.5
SKP1-202ENST00000353411 KARSQ15046 597 aaKnown RBP5.67□□□□□ -1.5
SKP1-202ENST00000353411 CCDC63Q8NA47 563 aa5.67□□□□□ -1.5
SKP1-202ENST00000353411 DAAM1Q9Y4D1 1078 aa5.67□□□□□ -1.5
SKP1-202ENST00000353411 AK9Q5TCS8 1911 aa5.67□□□□□ -1.5
SKP1-202ENST00000353411 FAM160A1Q05DH4 1040 aa5.67□□□□□ -1.5
SKP1-202ENST00000353411 PSME1Q06323 249 aa5.67□□□□□ -1.5
SKP1-202ENST00000353411 PAK2Q13177 524 aa5.67□□□□□ -1.5
SKP1-202ENST00000353411 CCDC96Q2M329 555 aa5.67□□□□□ -1.5
SKP1-202ENST00000353411 TAOK1Q7L7X3 1001 aa5.67□□□□□ -1.5
SKP1-202ENST00000353411 TSPYL2Q9H2G4 693 aaPredicted RBP5.67□□□□□ -1.5
SKP1-202ENST00000353411 CIB2O75838 187 aa5.67□□□□□ -1.5
SKP1-202ENST00000353411 CLTAP09496 248 aa5.67□□□□□ -1.5
SKP1-202ENST00000353411 ZC3H6P61129 1189 aaKnown RBP5.67□□□□□ -1.5
SKP1-202ENST00000353411 IRX4P78413 519 aa5.67□□□□□ -1.5
SKP1-202ENST00000353411 NUTM2DQ5VT03 806 aaPredicted RBP5.67□□□□□ -1.5
SKP1-202ENST00000353411 NUTM2AQ8IVF1 878 aaPredicted RBP5.67□□□□□ -1.5
SKP1-202ENST00000353411 CENPKQ9BS16 269 aa5.67□□□□□ -1.5
SKP1-202ENST00000353411 ITGB1BP2Q9UKP3 347 aa5.67□□□□□ -1.5
SKP1-202ENST00000353411 APOBRQ0VD83 1088 aa5.67□□□□□ -1.5
SKP1-202ENST00000353411 CUL3Q13618 768 aa5.67□□□□□ -1.5
SKP1-202ENST00000353411 ESYT1Q9BSJ8 1104 aa5.67□□□□□ -1.5
SKP1-202ENST00000353411 KLC4Q9NSK0 619 aa5.67□□□□□ -1.5
SKP1-202ENST00000353411 PBRM1Q86U86 1689 aa5.67□□□□□ -1.5
SKP1-202ENST00000353411 DDX58O95786 925 aaKnown RBP5.67□□□□□ -1.5
SKP1-202ENST00000353411 PSMC4P43686 418 aa5.67□□□□□ -1.5
SKP1-202ENST00000353411 IFT88Q13099 833 aa5.67□□□□□ -1.5
SKP1-202ENST00000353411 TDRD7Q8NHU6 1098 aaKnown RBP5.67□□□□□ -1.5
SKP1-202ENST00000353411 SDAD1Q9NVU7 687 aaKnown RBP eCLIP5.67□□□□□ -1.5
SKP1-202ENST00000353411 CD109Q6YHK3 1445 aa5.66□□□□□ -1.5
SKP1-202ENST00000353411 ANKRD50Q9ULJ7 1429 aa5.66□□□□□ -1.5
SKP1-202ENST00000353411 N4BP3O15049 544 aa5.66□□□□□ -1.5
SKP1-202ENST00000353411 E2F5Q15329 346 aa5.66□□□□□ -1.5
SKP1-202ENST00000353411 ACBD5Q5T8D3 534 aaPredicted RBP5.66□□□□□ -1.5
SKP1-202ENST00000353411 PRPF40BQ6NWY9 871 aaKnown RBP5.66□□□□□ -1.5
SKP1-202ENST00000353411 SELENOSQ9BQE4 189 aa5.66□□□□□ -1.5
SKP1-202ENST00000353411 CTTNBP2NLQ9P2B4 639 aa5.66□□□□□ -1.5
SKP1-202ENST00000353411 WDR7Q9Y4E6 1490 aa5.66□□□□□ -1.5
SKP1-202ENST00000353411 RASSF10A6NK89 507 aa5.66□□□□□ -1.5
SKP1-202ENST00000353411 VPS53Q5VIR6 699 aa5.66□□□□□ -1.5
SKP1-202ENST00000353411 C8orf74Q6P047 294 aa5.66□□□□□ -1.5
SKP1-202ENST00000353411 THEMISQ8N1K5 641 aaPredicted RBP5.66□□□□□ -1.5
SKP1-202ENST00000353411 VIMP08670 466 aaKnown RBP5.66□□□□□ -1.5
SKP1-202ENST00000353411 CC2D2BQ6DHV5 1058 aa5.66□□□□□ -1.5
SKP1-202ENST00000353411 AMOTL1Q8IY63 956 aa5.66□□□□□ -1.5
SKP1-202ENST00000353411 MYO1AQ9UBC5 1043 aa5.66□□□□□ -1.5
SKP1-202ENST00000353411 SNUPNO95149 360 aaKnown RBP5.66□□□□□ -1.5
SKP1-202ENST00000353411 CYP26C1Q6V0L0 522 aa5.66□□□□□ -1.5
SKP1-202ENST00000353411 CCDC110Q8TBZ0 833 aa5.66□□□□□ -1.5
SKP1-202ENST00000353411 CCDC77Q9BR77 488 aa5.66□□□□□ -1.5
SKP1-202ENST00000353411 GUCA1BQ9UMX6 200 aa5.66□□□□□ -1.5
SKP1-202ENST00000353411 NEO1Q92859 1461 aa5.66□□□□□ -1.5
SKP1-202ENST00000353411 SEC31AO94979 1220 aaKnown RBP5.66□□□□□ -1.5
SKP1-202ENST00000353411 GRIPAP1Q4V328 841 aa5.66□□□□□ -1.5
SKP1-202ENST00000353411 CC2D1AQ6P1N0 951 aaPredicted RBP5.66□□□□□ -1.5
SKP1-202ENST00000353411 ARMCX6Q7L4S7 300 aa5.66□□□□□ -1.5
SKP1-202ENST00000353411 ZNF710Q8N1W2 664 aa5.66□□□□□ -1.5
SKP1-202ENST00000353411 USP6NLQ92738 828 aa5.66□□□□□ -1.5
SKP1-202ENST00000353411 HAUS1Q96CS2 278 aa5.66□□□□□ -1.5
SKP1-202ENST00000353411 IQCDQ96DY2 449 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms