RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 CHMP4BQ9H444 224 aaKnown RBP10.32□□□□□ -0.76
CD44-205ENST00000352818 BABAM1Q9NWV8 329 aa10.32□□□□□ -0.76
CD44-205ENST00000352818 NOB1Q9ULX3 412 aaKnown RBP10.32□□□□□ -0.76
CD44-205ENST00000352818 TNNQ9UQP3 1299 aa10.32□□□□□ -0.76
CD44-205ENST00000352818 MAP3K15Q6ZN16 1313 aa10.32□□□□□ -0.76
CD44-205ENST00000352818 ZSWIM8A7E2V4 1837 aa10.31□□□□□ -0.76
CD44-205ENST00000352818 TNFRSF10AO00220 468 aa10.31□□□□□ -0.76
CD44-205ENST00000352818 FARP2O94887 1054 aaPredicted RBP10.31□□□□□ -0.76
CD44-205ENST00000352818 SNRPA1P09661 255 aaKnown RBP10.31□□□□□ -0.76
CD44-205ENST00000352818 PDE4AP27815 886 aa10.31□□□□□ -0.76
CD44-205ENST00000352818 CTGFP29279 349 aa10.31□□□□□ -0.76
CD44-205ENST00000352818 GRAPQ13588 217 aa10.31□□□□□ -0.76
CD44-205ENST00000352818 RSBN1LQ6PCB5 846 aaPredicted RBP10.31□□□□□ -0.76
CD44-205ENST00000352818 ARMC9Q7Z3E5 817 aa10.31□□□□□ -0.76
CD44-205ENST00000352818 TSPYL6Q8N831 410 aa10.31□□□□□ -0.76
CD44-205ENST00000352818 GRAPLQ8TC17 118 aaPredicted RBP10.31□□□□□ -0.76
CD44-205ENST00000352818 RWDD1Q9H446 243 aaPredicted RBP10.31□□□□□ -0.76
CD44-205ENST00000352818 ANGEL1Q9UNK9 670 aaKnown RBP10.31□□□□□ -0.76
CD44-205ENST00000352818 LAS1LQ9Y4W2 734 aaKnown RBP10.31□□□□□ -0.76
CD44-205ENST00000352818 CACNA1FO60840 1977 aa10.31□□□□□ -0.76
CD44-205ENST00000352818 BDP1A6H8Y1 2624 aa10.31□□□□□ -0.76
CD44-205ENST00000352818 IRS2Q9Y4H2 1338 aa10.31□□□□□ -0.76
CD44-205ENST00000352818 ZNF646O15015 1829 aaPredicted RBP10.3□□□□□ -0.76
CD44-205ENST00000352818 TMEM265A0A087WTH1 108 aa10.3□□□□□ -0.76
CD44-205ENST00000352818 BTBD11A6QL63 1104 aa10.3□□□□□ -0.76
CD44-205ENST00000352818 IGHDP01880 384 aa10.3□□□□□ -0.76
CD44-205ENST00000352818 CCL5P13501 91 aa10.3□□□□□ -0.76
CD44-205ENST00000352818 GPSM2P81274 684 aa10.3□□□□□ -0.76
CD44-205ENST00000352818 HDAC1Q13547 482 aaPredicted RBP10.3□□□□□ -0.76
CD44-205ENST00000352818 MAP3K11Q16584 847 aa10.3□□□□□ -0.76
CD44-205ENST00000352818 FAM109BQ6ICB4 259 aaPredicted RBP10.3□□□□□ -0.76
CD44-205ENST00000352818 TDHQ8IZJ6 230 aa10.3□□□□□ -0.76
CD44-205ENST00000352818 AGBL3Q8NEM8 1001 aa10.3□□□□□ -0.76
CD44-205ENST00000352818 SLC10A4Q96EP9 437 aa10.3□□□□□ -0.76
CD44-205ENST00000352818 FAM161BQ96MY7 647 aa10.3□□□□□ -0.76
CD44-205ENST00000352818 API5Q9BZZ5 524 aaKnown RBP10.3□□□□□ -0.76
CD44-205ENST00000352818 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.3□□□□□ -0.76
CD44-205ENST00000352818 LRRC37AA6NMS7 1700 aa10.3□□□□□ -0.76
CD44-205ENST00000352818 LAMB1P07942 1786 aa10.29□□□□□ -0.76
CD44-205ENST00000352818 ECM2O94769 699 aaPredicted RBP10.29□□□□□ -0.76
CD44-205ENST00000352818 USP17L8P0C7I0 530 aa10.29□□□□□ -0.76
CD44-205ENST00000352818 HCLS1P14317 486 aaPredicted RBP10.29□□□□□ -0.76
CD44-205ENST00000352818 MAGEA10P43363 369 aaPredicted RBP10.29□□□□□ -0.76
CD44-205ENST00000352818 DCTN1Q14203 1278 aa10.29□□□□□ -0.76
CD44-205ENST00000352818 MCM10Q7L590 875 aa10.29□□□□□ -0.76
CD44-205ENST00000352818 TMEM57Q8N5G2 664 aa10.29□□□□□ -0.76
CD44-205ENST00000352818 C8orf58Q8NAV2 365 aa10.29□□□□□ -0.76
CD44-205ENST00000352818 NKX2-3Q8TAU0 364 aa10.29□□□□□ -0.76
CD44-205ENST00000352818 U2AF1L4Q8WU68 220 aaKnown RBP10.29□□□□□ -0.76
CD44-205ENST00000352818 RTF1Q92541 710 aaKnown RBP10.29□□□□□ -0.76
CD44-205ENST00000352818 NECTIN2Q92692 538 aa10.29□□□□□ -0.76
CD44-205ENST00000352818 MS4A4AQ96JQ5 239 aa10.29□□□□□ -0.76
CD44-205ENST00000352818 ZBTB40Q9NUA8 1239 aa10.29□□□□□ -0.76
CD44-205ENST00000352818 ZMYND8Q9ULU4 1186 aaPredicted RBP10.29□□□□□ -0.76
CD44-205ENST00000352818 PCDHB15Q9Y5E8 787 aa10.29□□□□□ -0.76
CD44-205ENST00000352818 GNAT3A8MTJ3 354 aa10.28□□□□□ -0.76
CD44-205ENST00000352818 WNT10BO00744 389 aa10.28□□□□□ -0.76
CD44-205ENST00000352818 ITPRIPQ8IWB1 547 aa10.28□□□□□ -0.76
CD44-205ENST00000352818 MAFAQ8NHW3 353 aaPredicted RBP10.28□□□□□ -0.76
CD44-205ENST00000352818 ZBTB3Q9H5J0 574 aa10.28□□□□□ -0.76
CD44-205ENST00000352818 NSFL1CQ9UNZ2 370 aaKnown RBP10.28□□□□□ -0.76
CD44-205ENST00000352818 PTPRCP08575 1304 aa10.28□□□□□ -0.76
CD44-205ENST00000352818 TAF1P21675 1872 aa10.27□□□□□ -0.76
CD44-205ENST00000352818 C6orf229H3BNL8 230 aa10.27□□□□□ -0.77
CD44-205ENST00000352818 NF2P35240 595 aa10.27□□□□□ -0.77
CD44-205ENST00000352818 TBC1D16Q8TBP0 767 aa10.27□□□□□ -0.77
CD44-205ENST00000352818 BRI3BPQ8WY22 251 aa10.27□□□□□ -0.77
CD44-205ENST00000352818 SYMPKQ92797 1274 aaKnown RBP10.27□□□□□ -0.77
CD44-205ENST00000352818 CELF1Q92879 486 aaKnown RBP10.27□□□□□ -0.77
CD44-205ENST00000352818 CDX2Q99626 313 aaPredicted RBP10.27□□□□□ -0.77
CD44-205ENST00000352818 MXD3Q9BW11 206 aa10.27□□□□□ -0.77
CD44-205ENST00000352818 COL2A1P02458 1487 aaPredicted RBP10.27□□□□□ -0.77
CD44-205ENST00000352818 ALPK3Q96L96 1907 aa10.27□□□□□ -0.77
CD44-205ENST00000352818 NCOR1O75376 2440 aa10.26□□□□□ -0.77
CD44-205ENST00000352818 NUP98P52948 1817 aa10.26□□□□□ -0.77
CD44-205ENST00000352818 ANP32AP39687 249 aaKnown RBP10.26□□□□□ -0.77
CD44-205ENST00000352818 LACTBP83111 547 aaPredicted RBP10.26□□□□□ -0.77
CD44-205ENST00000352818 DDX46Q7L014 1031 aaKnown RBP10.26□□□□□ -0.77
CD44-205ENST00000352818 FAM43AQ8N2R8 423 aa10.26□□□□□ -0.77
CD44-205ENST00000352818 RNF208Q9H0X6 261 aa10.26□□□□□ -0.77
CD44-205ENST00000352818 UNC93B1Q9H1C4 597 aa10.26□□□□□ -0.77
CD44-205ENST00000352818 SASH1O94885 1247 aa10.25□□□□□ -0.77
CD44-205ENST00000352818 SYN1P17600 705 aa10.25□□□□□ -0.77
CD44-205ENST00000352818 ARHGEF6Q15052 776 aa10.25□□□□□ -0.77
CD44-205ENST00000352818 OTUD7BQ6GQQ9 843 aa10.25□□□□□ -0.77
CD44-205ENST00000352818 GIGYF2Q6Y7W6 1299 aaKnown RBP10.25□□□□□ -0.77
CD44-205ENST00000352818 SMC5Q8IY18 1101 aa10.25□□□□□ -0.77
CD44-205ENST00000352818 C7orf61Q8IZ16 206 aa10.25□□□□□ -0.77
CD44-205ENST00000352818 DIS3LQ8TF46 1054 aaKnown RBP10.25□□□□□ -0.77
CD44-205ENST00000352818 UTP14AQ9BVJ6 771 aaKnown RBP10.25□□□□□ -0.77
CD44-205ENST00000352818 TSPYL4Q9UJ04 414 aa10.25□□□□□ -0.77
CD44-205ENST00000352818 LAMB2P55268 1798 aa10.24□□□□□ -0.77
CD44-205ENST00000352818 SGPL1O95470 568 aa10.24□□□□□ -0.77
CD44-205ENST00000352818 GRK4P32298 578 aa10.24□□□□□ -0.77
CD44-205ENST00000352818 TAF1CQ15572 869 aaPredicted RBP10.24□□□□□ -0.77
CD44-205ENST00000352818 C8orf34Q49A92 452 aa10.24□□□□□ -0.77
CD44-205ENST00000352818 TMC4Q7Z404 712 aa10.24□□□□□ -0.77
CD44-205ENST00000352818 PPP1R42Q7Z4L9 355 aa10.24□□□□□ -0.77
CD44-205ENST00000352818 CNKSR2Q8WXI2 1034 aa10.24□□□□□ -0.77
CD44-205ENST00000352818 ZBED3Q96IU2 234 aaPredicted RBP10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms